Oncorhynchus nerka (sockeye salmon): 115141126
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Entry
115141126 CDS
T07952
Name
(RefSeq) retinoic acid receptor beta-like isoform X1
KO
K08528
retinoic acid receptor beta
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115141126
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
one03310
]
115141126
Transcription factors [BR:
one03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
115141126
Nuclear receptors [BR:
one03310
]
1. Thyroid hormone like
1B. Retinoic acid receptor (RAR)
115141126
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Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
115141126
NCBI-ProteinID:
XP_029535648
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Position
LG14:12946872..12962086
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AA seq
448 aa
AA seq
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MFDYMDFLAVGPGETLDFYTASPCMLQEPSVTACFTGLTETDWQIHRIAQSVETQSSSSE
DLFASPLSPPPPPRTYKPCFVCQDKSSGYHYGVSACEGCKGFFRRSVQKNMVYTCHRDSN
CIINKITRNRCQYCRLQRCFAAGMSKECVAHKGNHTRAVRNDRSKKKEKKETPKMTIIET
YELTAELGGVVENICRAHRETFPSLCQLGKYTTNSSSDTRIQLDLGLWDKFSELATKCII
KVVEFAKRVPGFTGLTITDQITLLKAACLDILILRICTRYTPDQDTMTFSDGLTLTRTQI
HNAGFGPLTDQVFTFAGQLLPLEMDDTESGLLSAICLVSGDRQDLEEPSKVEVLQEPLLE
ALKIYSRKRRPSMPLMFPKVLMKITDLRSISAKGAERVVTLKMEIPGSMPPLIQEMLEEM
ENLQKQSEEVQRADKNITPTHTPCPHST
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgtttgactatatggattttctcgcagttggtccaggagaaacgctggacttctatact
gcaagtccttgtatgctccaggaaccatctgtaaccgcatgcttcactggactaacagaa
acggattggcaaattcatcggatcgcgcaatctgtggaaacccagagctccagctcagag
gacctgttcgccagtcctctctcacctccgccccctcctcgcacctacaaaccctgcttt
gtgtgccaagacaagtcttcaggctaccactatggcgtcagtgcttgtgagggctgtaag
ggtttcttccgtagaagtgtccagaagaacatggtttacacgtgccaccgggacagtaac
tgcatcatcaataagatcaccaggaaccgctgtcagtactgccggctacagaggtgcttc
gccgcgggcatgtccaaggagtgtgttgcccacaagggaaatcacaccagagctgtcagg
aatgaccggagcaagaagaaggagaagaaggagactcccaagatgaccatcatcgagaca
tatgagctgacagcggaactgggcggtgtagtggagaatatctgtagggctcatagagag
acattcccttccctctgccagttgggcaaatacactacaaactcaagctcagacactagg
atccagttggacctggggctgtgggataagttcagtgagctggccaccaaatgtatcatc
aaggttgtggagtttgccaaacgggttcctggcttcaccggcctgactataactgaccag
atcaccctcctcaaagcggcctgtctggacattctgattctgcggatctgtacgaggtac
acacctgaccaggacactatgaccttctcagacgggctgaccttgacccgtacacagatc
cacaacgctggctttggcccgctcacagaccaggtgttcaccttcgccggccagctgctg
cccttggagatggatgacacagaaagtggcctactcagcgccatctgcctggtgtctgga
gaccgccaggacctggaggagccgtctaaggtggaggtcctgcaagagcccttactggag
gccttgaagatctactcccgtaaacgccggcccagcatgccccttatgttccccaaggtc
ctcatgaagataaccgacctgcgcagcatcagcgccaaaggagctgagcgagtggtgacg
ttgaagatggagatcccaggttccatgcctcctcttatccaggagatgctggaggagatg
gagaacctgcagaagcagtcagaggaggtgcagagagcagacaagaacatcacacccaca
cacacaccatgtccacacagtacatag
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