Oncorhynchus nerka (sockeye salmon): 115141130
Help
Entry
115141130 CDS
T07952
Name
(RefSeq) collagen alpha-1(XXVIII) chain-like
KO
K23619
collagen type XXVIII alpha
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
one01002
]
115141130
Peptidases and inhibitors [BR:
one01002
]
Peptidase inhibitors
Family I2: Kunitz - BPTI family
115141130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
Collagen
VWA_2
Kunitz_BPTI
VWA_3
VWA_CoxE
DUF1194
Motif
Other DBs
NCBI-GeneID:
115141130
NCBI-ProteinID:
XP_029535656
LinkDB
All DBs
Position
LG14:complement(13001506..13017998)
Genome browser
AA seq
1181 aa
AA seq
DB search
MGKGVALFLLLLALLHEAIGQRRRKGKYSVLRDGENDMTTCSMEMAFILDSSEGAKTFLF
EKQKSFVLQFSTRLTMLQVSGWTLKLRMAALQYSSSVSIEHSFTAWQDLDVFHSRVSSMA
YIGHGTYSTYAITNATQLFTQETKEDSVRVAVLMTDGADHPRNPDVIGAAADAKASGVKL
FAVGLSDLARQSQNSAKLRAIASTPAKQFVHSLTDPQLEEKLLKELGAIALEACPQAEVC
LCERGERGPPGNPGTKGDPGYEGPSGPKGSRGELGVGGRPGSDGLEGSPGYKGDKGEIGD
CGTPGGKGDEGPGGPPGPRGPRGDQGVNGPPGDQGPEGQTGPKGDQGTTGASGPAGDIGI
GFPGPKGAKGIQGRPGTLGPIGIGEPGQPGPPGLAGAQGNQGAVGEGLPGSKGDRGHEGP
RGEHGLTGVGVKGDKGNPGQLGSQGPVGMPGAGIQGEKGNQGPVGPPGPRGNPGVGLMGQ
KGSQGFSGEPGIPGESGVGEPGPKGDPGTEGLPGIPGLSGEDGDIGQKGDIGLHGPRGPD
GAPGKGVPGEKGDRGERGSRGQLGAVGPVGPMGAKGEPGSAGRAGTNGPPGRGLPGIKGD
PGAVGPPGHVGESGIGITGPKGERGLPGPIGPPGLEGEGLPGTPGAPGVPGLTGEIGPEG
KGLPGPKGDRGTPGPTGLAGAPGVGLMGPKGSAGQIGAPGPQGLPGEGIQGPKGESGFQG
IPGPRGPPGQGIQGDKGERGFVGERGRKGDRGETGETGTAGPLGRLGEKGEPGLTREEVI
KLVRSICGCGVKCRESPLELVFVIDSSESVGPDNFNVVKDFVNALVDRASVSRETTRVGV
VLYSHIDMVVVSLHQQASRDQVKKAVRTMTYLGEGTFTGSAIHQANQVFRAARPGVRKVA
IVITDGQADERDSVRLEEAVKEAKGSNIETFVIGVVNQSDPLYEEFKKELHLMASDPDRE
HVYLIDDFRTLPTLESKLLSRICESDGGAQFSSIPSSRYSPGTPGQAGIVRETPERTDTD
TPTFNGDFKKTHMVPGPPGESDRVFTPQGPQTGDRDNSETYRVPSFDREPFKRLPEFLLP
SEMKNPSHSVVMTGSQAPTQRPLTVMLPGLPPTSPPLPQDALIPDERCGQTLDPGPCRNY
FVKWYYDTTANACAQFWFGGCQGNQNRFESEKSCKKTCVKV
NT seq
3546 nt
NT seq
+upstream
nt +downstream
nt
atggggaaaggagtggctctgttccttctactgttggcacttcttcacgaggctataggc
cagagaagaagaaaaggaaagtacagtgtcctcagagatggagaaaatgacatgacaaca
tgttccatggagatggccttcattctggacagttcggagggcgccaagaccttcctgttc
gagaagcagaagtcctttgttctgcaattcagcactcgtctcaccatgctccaggtgtct
ggatggaccctgaagctgcggatggctgctctccagtacagcagctctgtgtctatagag
cacagcttcactgcctggcaggacctggatgtgttccacagcagagtcagctccatggcc
tacattggccatggcacctactccacctacgccatcaccaacgccacacagctcttcacc
caggagaccaaggaggacagcgtcagggtggcggtgctcatgaccgacggtgccgatcat
ccgaggaaccctgatgtgatcggagcagcggcagatgctaaggctagtggcgtgaagctc
tttgctgtagggttgtcggacctggcccgccagagccagaacagtgccaaactccgggct
atcgccagcacaccggccaagcaattcgtccacagtctcactgacccccagctagaggag
aagttactgaaagagttgggtgcaatagcgcttgaggcgtgtccacaggctgaagtgtgt
ttgtgtgaaagaggggagagaggccctcctggaaacccaggtacaaaaggagatccagga
tatgaaggaccatctggtccaaaaggatcaaggggagaacttggagtcggtggccgacca
ggaagtgacggtcttgagggcagtcctggttataaaggtgacaagggggagataggagac
tgtggcacccctgggggaaaaggagatgaaggccctggaggacctcctggcccacgggga
cctagaggagaccagggtgttaatggaccacccggggaccagggtccggagggccaaaca
ggacctaaaggggaccaaggaaccaccggtgcatctggaccagcaggtgacattggcatt
gggttcccaggtccaaagggggccaaaggaattcagggaagaccaggaacccttggtccc
attggcattggagagccaggacagccaggacccccaggacttgctggagcacagggtaac
cagggagctgttggggaggggctccctggctcaaagggggatcgagggcacgagggcccc
agaggtgagcatggtctcactggtgttggggtcaaaggtgataagggaaatcctggacag
cttggatcacaaggaccggtgggaatgccaggggcaggaattcaaggagaaaaggggaac
caagggccagttggccctccaggccccagagggaatccaggtgtgggacttatgggccaa
aagggaagccaaggcttctcaggtgagcctggaatcccaggggagagcggtgttggggag
ccaggacctaaaggagacccaggaacggaggggttacctggtattccgggcctctctgga
gaggatggagacataggacagaagggtgacattgggttacatgggcccaggggacctgat
ggggcacccggaaaaggtgtccctggagaaaagggggaccgaggggagcggggctccagg
ggccagctaggggcagtagggcctgtggggccaatgggggccaagggtgaacccggaagt
gctggacgagcaggtacaaacggaccacctgggcgggggttacccggtatcaagggggac
cctggtgcagtaggcccacccggacatgttggtgaatcaggaataggaatcactggaccg
aagggtgagagagggctaccagggcccattggtccacctgggcttgaaggggaaggcctt
cctggaactccaggagcccctggagtaccaggattgacaggtgagattggaccagaagga
aaaggtttacctggtcctaagggagaccggggaactccaggccccacaggactagctgga
gcaccaggagttgggctaatgggccccaaggggtcagctggtcagattggagcacctggt
ccccagggattgcctggagagggcatccaaggaccaaagggggagtcaggattccagggg
atcccgggccccagggggcccccaggacagggtattcaaggggataagggagaaaggggg
tttgtgggtgaacgaggcagaaagggggacaggggagagactggagagacaggaactgct
ggacctttgggcagactgggagaaaaaggggaacctggcctaacaagagaggaggtcatc
aaactggtcagatctatatgtggttgtggagtgaagtgccgtgagagcccactggagttg
gtctttgtgattgacagctcagagagtgtgggccctgacaacttcaacgtggttaaggac
tttgtgaacgctctggtcgaccgtgcctccgtgagccgggagaccactcgcgtcggggtg
gtcctctacagccacatcgacatggtggtggtcagtctgcaccagcaagccagccgggac
caggtgaagaaggcggtccgcactatgacctacctgggcgaaggcactttcacgggcagt
gccatccatcaggccaaccaggtgttccgggcggccaggcccggggtgaggaaagtggcc
atagtgatcacagatggacaggcagacgagagggactctgtgaggctggaggaggcagtg
aaagaggccaagggcagtaacattgagacgtttgtcatcggggtggtgaaccagagtgat
ccgctgtacgaggagtttaagaaagagctccacctcatggcctctgacccagacagggaa
cacgtctacctgattgatgacttcaggacacttcctacccttgagagcaagctgctgagt
cggatctgtgagagtgatggcggggcccaattcagctccatccctagctccagatactcc
cccggaacccctggacaagccgggattgtcagggaaaccccagagaggactgatactgac
acgcccactttcaatggagactttaaaaaaacacatatggtgccaggtccaccaggagag
tcagacagagtctttaccccacagggcccccagaccggggaccgagataactcagagacc
tacagggtcccatcctttgacagggaacccttcaagcgcctaccagagttccttcttccg
tcagagatgaagaacccctcccacagtgtggtcatgacgggctcccaggcccccacccag
aggccccttaccgtaatgctacccgggctccccccaacctctccacctctgccccaggat
gctttaataccggatgagagatgtggacaaactctggaccccgggccttgcaggaattac
tttgtgaagtggtactatgacactacggctaatgcctgtgcccagttctggttcggaggc
tgtcagggaaaccaaaaccgatttgagtcggagaagagctgcaaaaaaacctgtgttaag
gtctaa
DBGET
integrated database retrieval system
