Oncorhynchus nerka (sockeye salmon): 115141229
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Entry
115141229 CDS
T07952
Name
(RefSeq) glutamate receptor ionotropic, kainate 3-like
KO
K05203
glutamate receptor, ionotropic kainate 3
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04080
Neuroactive ligand-receptor interaction
one04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
115141229
04082 Neuroactive ligand signaling
115141229
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
one04040
]
115141229
Ion channels [BR:
one04040
]
Ligand-gated channels
Glutamate (ionotropic)
115141229
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Ortholog
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GFIT
Motif
Pfam:
ANF_receptor
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
Peripla_BP_6
Motif
Other DBs
NCBI-GeneID:
115141229
NCBI-ProteinID:
XP_029535836
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All DBs
Position
LG14:complement(16943683..17057516)
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AA seq
921 aa
AA seq
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MRNTLLSARSSIVEYWTSAILCLFWIQYSCGMPHVIRIGGIFEQTEGPVPLVSPEELAFK
FAVNNINRNRTLLPNTTLTYDIQRINIYDSFEASRKACDQLSLGVVAIFGPSHSSSSNAV
QSICNALEVPHIQVRWKHHPMDNRDTFYANLYPDYSSLSYGILDLVQFLKWKTATVVYDD
STGLIRLQELIMAPSRYNIRLKIRQLPLDGEDTRPLLKEMKRGREFRIIFDCSHEMAAQI
LKQAQTMGMMTEYYHYIFTTLDLMAIDLEPYRFCGVNMTGFRILNVDNPQVASIVEKWSQ
ERQIPPKPDSGLLEGIMTTDAALTYDAVHIVSVSYQHAPQMTVNSLQCHRHKPWRFGGRF
MNFIKESHWEGLTGRLSFNRTSGLRTDFDLDIISLKEEGLEKVGKWSASGGLNITEVPKR
KGMNITDSLANRSLVITTILEEPYVMLKKSDKALVGNDRFEGFCIDLLKELASILGFTYE
IRLVPDGKYGSQDDKGQWNGMIKELMEHRADLAVAPLTITYLREKVVDFSKPFMSMGISI
LYRKPNTTNNGFFSFLNPMTPDIWVYILLAYLGVSCVLFVIARFSPYEWYDAHPCNPGSD
VVENNFTLLNSFWFGVGSLMQQGSELMPKALSTRIIGGIWWFFTLIIISSYTANLAAFLT
VERMESPVDSADDIAKQTKIEYGVVKDSATMSFFKKSKVSTFEKMWAFMSSKQSTSLVKS
IEDGIQRVLKSDYALLMESTTIDYITQRNCNLTQVGGVIDSKGYGIGTPMGSPYRDKVTI
AILSILEDGRLHMLKEKWWSGSSCLDEERREKAGPMGIQNLGGIFIVLASGLVLSVFVAI
AEFIYKLRKTAKREQRSFCSAMVDEIRQSFTCGRRVKHKHHHQVPVMVKTDAVINMHTFN
DRRLPGKDNMSCNTGMTPVFP
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atgcgaaacactttgttgtctgcccggagttcgattgtggaatactggacatcggccatt
ctatgtctcttttggattcagtactcttgtgggatgcctcatgtcattcgaatagggggg
atttttgagcaaacagagggaccggtgccgctcgtcagcccagaggagcttgcctttaaa
tttgcagtgaacaacatcaacagaaacaggactttattgcccaacacgacgttaacgtac
gacatacagaggattaatatctacgacagttttgaagcgtcgagaaaagcctgtgaccaa
ctatctttaggtgtagtggcaatatttgggccgtcacatagctcgtcctcaaacgccgtc
cagtccatctgcaatgcgttggaagtaccacacatccaggtgcgatggaaacatcaccct
atggacaacagggacacattttacgccaacctgtaccccgattactcttctctcagttac
ggcatcttagatttggtgcagttcctcaagtggaaaacagccacagtcgtatatgatgac
agtacaggtcttattagactacaggaactgataatggccccctccaggtataacatcagg
ctaaagattcgccagctccctcttgacggagaggacaccaggcctctcctcaaggagatg
aagagaggacgggagtttcgcattatcttcgactgcagccacgaaatggctgcacagatc
cttaaacaggcccagacgatgggaatgatgacagagtactaccactacatcttcaccact
ctggacctcatggctatcgacctggagccctaccgtttctgtggcgtcaacatgaccggc
ttccgcatcctcaacgtggacaaccctcaggtggcgtccatcgttgagaagtggtcccaa
gagaggcagatacctcccaagcccgactcgggtctcctggaggggatcatgacgacagat
gctgctctgacgtacgacgcggtccacatcgtgtccgtctcctaccagcacgcaccacag
atgacggtcaactcgctgcagtgccaccgccacaagccatggaggttcggcgggcgcttc
atgaacttcatcaaagagtctcactgggaaggcctgacgggcaggctgtcgttcaacagg
accagtggcctccgcacagactttgacctggacatcatcagcctgaaagaggagggccta
gagaaggtggggaagtggagtgcgtccggaggtctcaacatcaccgaggtgcccaagcgg
aaagggatgaacatcacagactcgctggccaaccgttccctggtcatcaccaccatcctg
gaggagccatatgtcatgcttaagaagtctgacaaggcgctggtgggcaacgaccgcttc
gagggattctgtatcgacctgctcaaggagctggccagcatcctgggcttcacctacgag
atccgcctggtgcctgatgggaagtacggatcgcaggacgacaagggccagtggaacggc
atgatcaaggagctgatggaacacagagccgacttggctgtggcccctcttaccattacc
tacctgcgtgagaaggttgtagacttctccaagcccttcatgagcatgggcatcagtatc
ctgtatcgcaagcccaacaccaccaacaacggcttcttctccttcctcaaccccatgacc
cctgacatctgggtctatatcctgctggcctatctaggcgtcagctgtgtcctcttcgtc
atcgctaggttcagtccatacgaatggtatgacgcccatccctgcaatcccggatccgat
gtggtagagaacaacttcaccctccttaacagcttctggttcggtgtgggctccctcatg
cagcaaggctctgagctgatgcccaaagccctgtccaccaggatcatcggaggcatctgg
tggttcttcaccctcatcatcatctcctcctacacggccaacctggccgccttcctcacc
gtggagcgcatggagtcgcccgtggactctgccgacgacattgccaagcagaccaagatt
gagtatggtgtggtcaaagacagtgccaccatgtctttcttcaagaaatcaaaggtgtct
acttttgagaagatgtgggcttttatgagtagtaaacagagtacgtcgctggtcaagtcc
attgaggacggcatccagagggttctgaagtctgactatgccttgctcatggaatccacc
acaattgattacattacccagcggaactgcaacctcacccaggttggaggcgtcattgac
agcaaaggctatggaataggcactcccatgggctctccataccgggacaaagtgaccatc
gccatcctgagcattctggaggatggccgtctgcacatgctcaaggagaagtggtggagc
ggcagcagctgtctggacgaagagcgccgtgagaaagccggccccatgggcattcagaat
ttgggagggatctttatagtgctggcatctggcctggttctctccgtctttgtggctata
gccgaattcatatacaagctaaggaagacggcgaaacgtgagcagaggtctttctgcagt
gccatggtggacgagatcagacagtcgttcacctgcgggaggcgtgtgaaacacaaacac
caccaccaggtcccggtcatggtcaagacggatgcagtgatcaacatgcacacgttcaac
gaccgacgactcccgggaaaggacaacatgagctgcaacactgggatgacccccgtgttc
ccgtga
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