Oncorhynchus nerka (sockeye salmon): 115141236
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Entry
115141236 CDS
T07952
Name
(RefSeq) replication protein A 32 kDa subunit-like
KO
K10739
replication factor A2
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03030
DNA replication
one03420
Nucleotide excision repair
one03430
Mismatch repair
one03440
Homologous recombination
one03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
115141236
03420 Nucleotide excision repair
115141236
03430 Mismatch repair
115141236
03440 Homologous recombination
115141236
03460 Fanconi anemia pathway
115141236
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
one03032
]
115141236
03400 DNA repair and recombination proteins [BR:
one03400
]
115141236
DNA replication proteins [BR:
one03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
115141236
DNA repair and recombination proteins [BR:
one03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
115141236
MMR (mismatch excision repair)
115141236
DSBR (double strand breaks repair)
HR (homologous recombination)
115141236
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPA_C
tRNA_anti-codon
HVO_2525_N
Motif
Other DBs
NCBI-GeneID:
115141236
NCBI-ProteinID:
XP_029535854
LinkDB
All DBs
Position
LG14:17528784..17536118
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AA seq
278 aa
AA seq
DB search
MWNQGGSYGESNMGGGYTQSPGGFASPAASQGGEKKGRQRAQHIVPCTVSQLMSAAQAED
VFRVGEVEVAQVTIVGIIRTTDKSMTNIQYKVDDMTGAPMDVKQWVDTEDPSVDSTVIPP
GTYVKVSGNLRSFQNHRSMVAFSVRPLDDMNEITSHMLEVVQAHVLLSKPQTIMMGGGGG
MNTSMVPLSRPGMGGNMGGGYSGANDMSANGLSPSQNQVLSLIRSCPDAQGVSTQDLKQR
LSGMSLAVIKHAVEFLSNEGHIFSTIDEDHFKSTDNDD
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgtggaaccaaggtggatcatacggtgaatcaaacatgggtggtggatacactcagtcc
ccgggaggattcgcatcacctgctgcctcccagggaggagagaagaaagggagacaacgt
gcccaacatattgtcccctgcacagtgtcccagctcatgtctgctgcccaagcagaggat
gtcttcagagtgggagaggtagaggttgcccaggttaccattgtgggcatcatcagaacc
actgacaaatccatgaccaacatccagtacaaagtcgatgacatgacaggggcccctatg
gacgtgaagcagtgggtagatacggaggatcccagtgtggacagcactgtcatcccccca
ggcacttacgtcaaggtctctggcaatttgcgctccttccagaaccacaggtccatggta
gcattcagcgtccggccccttgacgacatgaacgagatcacctcccacatgctggaggtg
gtgcaggcacacgtgctgctcagcaaaccacagacgattatgatgggcggaggaggggga
atgaacactagcatggtgcccttgtcgcggccgggaatgggtggcaacatgggaggtgga
tactcgggtgccaacgacatgtccgctaacggcctgagcccaagccagaaccaggtgctg
agcttgataaggagctgtccagacgcgcagggtgtcagcacacaggacttgaagcagaga
ctcagcggcatgagcttggctgtcatcaagcatgcagtggagttcctcagcaacgaagga
cacatcttctccaccatcgacgaggatcacttcaagtctacagacaatgacgactaa
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integrated database retrieval system
