Oncorhynchus nerka (sockeye salmon): 115141271
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Entry
115141271 CDS
T07952
Name
(RefSeq) remodeling and spacing factor 1-like
KO
K11657
remodeling and spacing factor 1
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
115141271
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
one03036
]
115141271
Chromosome and associated proteins [BR:
one03036
]
Eukaryotic type
Chromatin remodeling factors
RSF complex
115141271
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PHD
WHIM1
WSD
DDT
Motif
Other DBs
NCBI-GeneID:
115141271
NCBI-ProteinID:
XP_029535879
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Position
LG14:complement(37318775..37336724)
Genome browser
AA seq
1379 aa
AA seq
DB search
MAALAAAQGSNPGLCPSFAVVCSFLERYGQALDLPELTFPQMERYLRDTSTVPKPLVELH
VKLLRKLGKSVSADKWERYLAKVCQDINSSWAWELEHKGYQDLSMECKTSILKYLCEIQF
DDNLKFKTLVNEEEAEAMRLQPLGRDRQGLMYWLQTDAQHNIRLYTEEQDDWDGSTWRCI
VRTRNDLADALDLLKTQLDPEHKEKEEGETERKKEMDKEKEGGSNFAKTVERGRRHTEEG
MGSVVTRNMMAGGEVKEEEEEEEEKARQKRKAEEDKNKSKEREKEEEEDKREKSISSTYP
ESTSTDDNMASLAEKENPTKSEPLFSVKEENIAVEMKEEKEMKKCDEKEEGETQSVRKEE
RSEVIDNRVSTITALVKEETQMLNNSPSNAVSVVMAPVSATTKQEVPPVKEEAERALRTD
QQAKIPLKKRELFGANRHHSNTHHNNDMHSNQHNNNSHSSSTSSSIIVRNPSVTHTKEEQ
MGRQSAPPGGLAVPLPEELTNGGAPLNGLGGLTGGIGHVGVICRSASQQQDGGLFCTDRT
RPGAEEGAERASAPDKERSRQSVLVRKSPGWGETGAPTPLEPRGQERQAGGEERERKEKG
ERSRERLGEDGIEKARERLDGDLSGERDDNTKEKEEKEKKTTLHMEKREGCHGTEEEEKK
STSGKKEQESESSQTVEGQRDQGEALSTDTPAHARVRGAGHGAADRPGPLEASSELQKEG
IRLKIKIPPNQRIENVREEEEKSEEQGDGRSLRRSARICRPSPNKVKSQDAPPGVRREEE
EEKTAQWQKKRANPEGQSRTVKSRRRQRGPRWSNTRAKRCKPNEGGEEGEERGRKEERGR
EGSICDSDDSSQSEEMPNEDPCSHCGLPNHPELILLCDSCDSGYHTACLRPPLMVIPEGE
WFCPPCQHKLLCDRLEEQLQNLDCALKKRDRAERRRERLVYVGISVENIIPQEGEEEEEK
LVKKKDAKNTKNLGRRSTRTRKCISYRFDDFDDAIDEAIEEDVRDEDGGEVGQGKDIATI
LSEEGKEKRGPTTAQAPPTRSRKRRRLNDLESDSTAAESEEEFQLSASTEEEEFVASGDE
EAASDVDSFASDPGFVSQSTRAQRRAPKQRTSRTAAKCKKRPRRQRRGWGEEEEESEEEE
EEEMETSDLSDSDGDRKRCGLRRGRKREVNYRETSESECSQATTNKDKAKPRRRRLSSSN
SDESSHSRESEEEEKRMRGKRRREEVEESRTGGKKRRGETMGRGKRRKVLIEQRRKRLAL
LKKSRPSTKDNEDGNDEGESESSSEEDRPIRKRLNRIDSDEEEEKEGKNDEDEEEEDEEE
KKLRKPSSKDKESNSPNGQQASRGSTQPGAESAALPRDRPARAGQNRSNSPPPPDQSDA
NT seq
4140 nt
NT seq
+upstream
nt +downstream
nt
atggctgctttagcggcagcgcagggctcaaaccccggtctctgccccagtttcgcagtg
gtctgctcgttcctggagcgctacggacaagccctggacctccccgaactcacgtttccg
cagatggagaggtatctccgggacacatcgacagttcccaagccactggtggagctgcat
gtcaagctcctgaggaagcttggcaagtctgtgtctgcagacaagtgggagcggtacctg
gctaaggtatgccaggacatcaacagtagctgggcttgggagctggaacacaagggctac
caggatttgagcatggagtgcaaaaccagcatcctcaaatacctgtgtgagatccagttt
gatgacaacctgaagttcaagacgttggtgaacgaggaggaggcggaggcaatgaggttg
cagccgttgggcagagacagacagggcctgatgtactggctgcagactgacgcccaacac
aacattcgcctgtatacagaggaacaggacgactgggacggatccacctggagatgtatc
gtcagaacccggaacgacttggccgatgctctggacctcctgaagacccagctggaccca
gaacacaaggagaaagaggagggagagacggagagaaagaaagagatggacaaagagaag
gagggaggatccaactttgccaaaactgtggagagggggagaagacacacagaggagggt
atgggttctgttgttactagaaatatgatggctggaggagaggtaaaggaggaggaagag
gaggaagaggagaaggcaagacagaagaggaaggctgaggaagacaagaacaagagtaaa
gagagagagaaggaggaagaggaggataagcgagaaaagagtatatcatctacctaccca
gaatccactagtacggatgacaacatggcatcgttagcagagaaggaaaacccaaccaag
tctgaaccattattctcagtgaaagaggaaaacattgcagttgagatgaaggaagaaaag
gaaatgaaaaaatgtgatgagaaagaagagggagagacacagagtgtgaggaaggaggag
aggtcagaagtgattgacaacagagtgagcaccatcaccgcgctcgtcaaagaggagacc
caaatgcttaacaactcccctagcaacgctgtctccgtcgtcatggcgcccgtctcggca
acgacaaaacaggaagttcctcctgtgaaggaggaagcggagcgggccctgaggaccgac
cagcaggccaagataccactgaagaagagagagctctttggcgctaaccgtcaccatagc
aacacgcatcacaacaatgacatgcacagcaaccaacacaacaacaacagccatagcagc
agtactagcagtagcatcattgtccgtaacccttcagtaacacataccaaggaggagcag
atggggaggcagtcagcgccacctgggggcctagctgtcccactgccagaggagctgacc
aatgggggggctcccctaaacgggcttggagggctcacagggggtataggtcatgtgggg
gtcatctgcaggtcagcctcacagcaacaagatggtggattgttctgtacggacagaacc
agacctggggcagaggaaggggctgagagggccagcgctccagacaaggagaggagcagg
cagtcagtcctggtgaggaagagtcctggctggggagagactggagccccaacaccccta
gagcctagaggacaggagagacaggcaggaggagaggagagggaaaggaaggagaaagga
gagagatccagggagagattaggagaggatggaattgagaaagcaagggagaggttagat
ggagacctgtctggagagagggatgacaacacaaaagagaaagaagagaaagagaaaaag
accaccctccatatggagaaacgcgagggatgccatggaacagaggaagaggagaagaag
agtacttcaggaaagaaggagcaggagtcagagagcagccagactgtagaaggacagagg
gaccagggagaggccctcagcacagacacaccagcccatgccagagtgaggggagctggg
catggagcagcagaccggccgggtccccttgaggcctcctctgagctgcagaaagaaggg
atcaggctgaagataaagatccctcccaaccagaggatagagaacgtgagagaagaggag
gagaagtcggaggagcagggagatgggaggtctctgcggagatcggctcggatctgcaga
cccagcccaaacaaggtgaagagccaagacgcacccccaggagtgaggagggaagaagag
gaggagaagactgctcaatggcaaaagaagagagcaaaccctgagggacaaagcaggact
gtaaagagcagacgaagacaacgaggcccccgctggtcaaacactcgagcaaagagatgc
aaaccgaatgagggaggagaggagggggaggagagagggagaaaggaggagagagggagg
gagggaagtatttgtgactcagatgactctagccaatcagaggagatgcctaatgaagat
ccctgcagccactgtggactccccaaccaccccgaactgatcctgctgtgtgattcatgt
gatagtggttaccacaccgcctgcctcagaccccctctcatggtcatacctgagggagaa
tggttctgcccaccctgccaacacaaactgctgtgtgacagactagaggagcagctgcaa
aatctggattgcgctctgaagaaaagagaccgagctgagaggaggagggagcgtctggtg
tatgtgggaatcagtgtggagaacatcattcctcaggaaggggaggaagaagaggagaaa
ctggtgaagaagaaagatgcaaaaaataccaaaaacctgggaaggaggtctaccagaacc
aggaagtgtatcagctacaggtttgatgactttgatgacgccattgatgaagcgatagag
gaagacgtcagagatgaggatggaggagaggtggggcagggtaaggacattgccaccatc
ctatcagaggaggggaaggagaaacgaggaccaaccacagctcaggcccctcccaccagg
agcaggaagagaaggagactcaacgacctggagagcgacagcacggctgcagagagcgag
gaggagtttcagctcagcgccagcacggaggaggaggagtttgtagcgtcaggtgatgag
gaagcagccagtgatgtggacagctttgccagcgacccgggctttgtaagccagtccaca
cgggcacagagacgggcacctaaacagagaacctccaggaccgcagcaaagtgcaagaaa
cgcccacgcagacagaggagaggatggggggaggaggaggaggagagtgaagaggaggag
gaagaggagatggagaccagtgatttgagtgacagcgatggggacaggaagaggtgtggt
ttaaggaggggccggaagcgggaggtgaactaccgcgagacgtcagaatccgagtgttcc
caggcaaccaccaataaggataaggctaaaccccgccgccgtcgtctctccagctcaaac
agcgatgaatcctcccattcgagagagtctgaggaggaagagaagagaatgaggggaaag
aggcggagagaagaggtggaggagagtagaacagggggaaagaagaggagaggagagacg
atgggccgagggaagcggaggaaggtgttgatagaacagcggaggaaacgtctagctctg
ctgaagaaaagcagaccctccactaaagataatgaggatggtaacgatgaaggggaatcg
gagtcgtcatccgaggaagatcgtcctatccgcaaacgacttaaccgcatcgactctgat
gaagaggaggagaaagagggaaaaaatgacgaggacgaggaagaagaggatgaagaggag
aagaagctgagaaagccgtcatcaaaagacaaggaatcaaacagccctaatggacagcag
gcctctagaggctcaacacagcctggggctgagagtgcagccttacccagggacagacca
gccagagctgggcagaacaggtctaacagccccccacctcctgaccagtcagacgcatga
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