Oncorhynchus nerka (sockeye salmon): 115141317
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Entry
115141317 CDS
T07952
Name
(RefSeq) short transient receptor potential channel 2-like
KO
K04965
transient receptor potential cation channel subfamily C member 2
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
one04040
]
115141317
Ion channels [BR:
one04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
115141317
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GFIT
Motif
Pfam:
TRP_2
Ion_trans
PKD_channel
Ank_2
Ank
Motif
Other DBs
NCBI-GeneID:
115141317
NCBI-ProteinID:
XP_029535915
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Position
LG14:49880566..49886063
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AA seq
847 aa
AA seq
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MDNITPDQWQAIVNKKLNFPPELIAAIQEDNVILVGSLLSTGDGIIRQLDESEDRLWREA
LNLSIRMGNEDTFSALMLGVKFDFRQIYEALLVAVDTNQPRVVKRLLDRLDQEKGNKMDV
RSFSMAIFDHSIDDSQFAPGVTPLTLACQKDLYDIVTMLTKKGHAIPLPHSISCTCLECR
NGRQYDLLKFSLSRINTYRGMASRAYLSITTEDAMLSAFRLSRELRMLSKKEPEFKPQYL
SLEELCQEFAVEMLAMCRNQSEVTTVLNICDDDNEDELDEQTFEEGIPTLSRLRLAVNYN
QKLFVSHPICQQVLSSIWCGNIPGWRGSKTVWKLTVSLGIFFTMPLLCMIYWVAPKSKIG
KTLKIPVIKFLLHSASYLWFIIALLAESIFMELYRDEFASRQQNILYNSLHMIWVVGFFW
SECKNVWAEGLRGYIVDWSNILDMIVLSMYLASFGLRVLIMAIGHFVCQDQNLVEKCAYF
TQTVRDEWWQEDPQLISEILFAVTSMLSFTRLAYILPAHESLGTLQISIGIMIDDMMRFM
FVLMIIGTAFLCGLNNIYVPYATSPHLGRFNETFSFLFWTMFGASNQGYVDMPDFVLAQF
VGRVLYGVFTLVIVIILLNMLIAMITNSFQKIEDDADVEWKFARSKLYLSYFREGSTIPV
PFNLVPSPKALFYLLRGFFCCCNRKKIPDYPPIASMSNSTMNNSGEAGMDRVSYRLQVVK
ALVQRYIEAARREFGEATRKDVGNRITELNKGVGRLHSDMKKFYQNLQNSKSFGSKGDGG
NFLGKYIKGAKNNFKNFDKNEAMGNSPDLLRVNLHLVGVVKEGKKEEGKTEIIPGGVYRE
NHPHKQQ
NT seq
2544 nt
NT seq
+upstream
nt +downstream
nt
atggacaatattacgccagaccaatggcaggcgattgtgaacaaaaagcttaatttcccc
ccggagctgatagcagccattcaggaagacaacgtaattctggtgggcagcctgctgtcc
acaggggatggcatcatccgccagctggatgagtctgaggaccgtctgtggagagaagcc
ctgaatctgtccatccgcatgggcaatgaggacactttctccgctctgatgctgggcgtc
aagtttgactttaggcagatctacgaggcgctgctggtggcggtggacaccaaccagccc
cgggtggtcaagaggctcctggaccgcctggaccaggaaaagggcaataagatggatgtg
cgctcattctccatggccatatttgaccactccattgatgactcccagtttgcccccgga
gtgaccccgctgaccctggcctgtcagaaggacctgtatgacattgtcaccatgttgact
aagaagggtcatgccatccctctgcctcactctatctcctgtacctgtctggagtgcagg
aacggccgtcagtatgacctgctgaagttctctctgtctcgtatcaacacctaccggggc
atggccagccgggcatacctctccatcaccacagaggatgccatgctcagtgccttcaga
ctcagtcgggagctacgcatgctctccaagaaagaacctgaatttaagccccagtacctg
agcctggaagagctgtgtcaggagttcgcagtggagatgctggccatgtgtcgcaaccag
agtgaggtcacaacggtcctgaacatctgtgatgacgataatgaagatgaactggacgag
cagacctttgaggaggggattccaaccctgtcacgcctacgccttgcagtcaattacaat
caaaaactgtttgtgagtcatcccatctgccagcaagtgctgtcgtccatttggtgtgga
aacatcccagggtggcggggcagcaagacggtctggaagctcacggtgtctcttgggatc
ttcttcaccatgcctctcctctgtatgatctactgggtcgctcccaagtccaagattgga
aagactttgaagatacctgtgatcaaattcctgctgcactctgcctcctacctgtggttc
atcatcgcccttctagctgagtctattttcatggagctgtaccgcgatgagttcgcatcc
cggcagcaaaacatcctctacaactccctccatatgatctgggtggtcggtttcttctgg
agtgagtgtaagaatgtgtgggcggagggtctgaggggttacatcgtggactggtccaac
attctggacatgatagtactcagcatgtacttggcctccttcggtctgagagtcctcatc
atggcaattggtcattttgtttgccaagaccaaaacttggttgagaagtgtgcctacttc
acccaaacagtgcgggatgaatggtggcaggaggaccctcagctgatctcagagattctg
ttcgctgtgaccagcatgctcagcttcacccgactggcctacatcctgcctgcccatgag
tctctgggtactctacagatctccattggtataatgatagatgacatgatgaggttcatg
tttgtcttgatgatcattggaacagcttttctctgtggactgaataatatctacgtgccc
tacgcaacttctccacatcttggacgcttcaatgaaaccttcagctttctcttctggacc
atgtttggtgcatctaatcaaggctatgtggacatgccagattttgtcctggctcagttt
gtgggcagggtcctgtatggggtcttcactctcgtcattgtcattatcctgctcaatatg
cttatcgccatgatcactaattcattccagaagatagaggatgatgctgatgttgaatgg
aagtttgctcgttcaaagctctacttgagttacttcagagagggctccactatacctgta
cccttcaacctcgtcccctctccaaaggccttgttctacttactgaggggctttttctgt
tgctgcaaccgaaagaagattccagactatcctcctattgcctctatgtccaacagtaca
atgaacaacagtggagaggcagggatggaccgagtgtcatatcgcctgcaggtggtcaag
gcgctggtacagcgctacatagaagcagcccgcagggagtttggagaggcgacacgtaaa
gatgtggggaacaggatcacagagctgaacaaaggggtggggagacttcactctgatatg
aagaagttctatcagaacctgcagaacagcaagtcctttggctcaaagggcgatggaggc
aacttcctgggcaagtacataaaaggagcaaagaacaactttaagaactttgataaaaat
gaggcaatggggaatagcccagacctgttacgagtcaatctgcacctcgtaggggtggtg
aaggaggggaagaaagaggaggggaaaacagaaataatcccaggaggtgtttacagagaa
aaccacccccacaaacaacagtga
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