Oncorhynchus nerka (sockeye salmon): 115141328
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Entry
115141328 CDS
T07952
Name
(RefSeq) peroxisomal targeting signal 1 receptor-like isoform X1
KO
K13342
peroxin-5
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
one00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
115141328
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115141328
Membrane trafficking [BR:
one04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
115141328
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_11
TPR_8
TPR_17
TPR_16
TPR_14
TPR_19
TPR_CcmH_CycH
TPR_12
TPR_7
TPR_Slam
TPR_20
ANAPC3
TPR_9
TPR_10
MAS20
Connexin50
PEX18_PEX21_C
Motif
Other DBs
NCBI-GeneID:
115141328
NCBI-ProteinID:
XP_029535934
LinkDB
All DBs
Position
LG14:17860805..17877172
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AA seq
678 aa
AA seq
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MAMRELVEGECGGANPLMKLTGHMTQEGGAWRHRSTPTIPPTPIEIATEEELVNEFMQQA
PPRPPHSFDMGQLLEEMQQIDQQSYRQAPQRAPGVAALALSGDWTSEFLSGADAAAAASS
GQAGLGDPADADWTREFITDGTDPGRWAEEYLEQSEEKLWLGDLGEREQDWTKEYLPGDE
LKQTANELVAKVNDPKLQNTEFLRFIRQIGEGSVTVEDRAGKQHTDRAQAKEAQNWASNL
NQFLEETGGGTLPSTTQEWDQKIAKAKAKQAHQWASVVKQVSVESAESWVDEFATGGPDF
QQAKAAVESDLDFWEKLQQEWEEMAKRDAESHPWLSDFDQMLSSSYDKGYQFEEDNPYMS
HQDPLAEGVRRMEAGDIPGAVRLFESAVQREPDNQLAWQYLGTCQAENEQEFAAISALRR
CIELKKDNLTALMALAVSFTNESLHRQACETLRDWLRHNPAYRPVLEQSEREREKDGGTR
ERERFGSLLPDSLFTEVQSLFLSAANSDPARVDPQLQCGLGVLFNLSGEYDKAVDCFTAA
LSVTPQDYLLWNKLGATLANGSRSEEAVAAYRRALELQPGFIRSRYNLGISCVNLGAHRE
AVEHFLEALSLQRQASGEGETVSASRAPGGAAATMMSDNIWSTLRMALSMMGESSLYAAA
DRRDLDTLLSYFCQREGE
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgcgggagctggtggagggggagtgtgggggagccaatcctctcatgaaactg
acgggtcatatgacccaggagggaggagcttggaggcacaggtcaacgcccactattccc
cctacacccattgaaatagcaacagaagaagagttggtgaatgagttcatgcagcaggcg
cctccacggccccctcacagcttcgacatgggccagttactggaggaaatgcagcagatt
gatcagcagagctacagacaggctccacagagagctccgggtgtggctgcgttggccctg
tctggtgattggacgtctgagtttctgtcgggagcagatgccgctgccgccgcctcatcg
gggcaggcgggacttggagacccggccgatgctgattggaccagagagtttatcaccgat
ggcacagatcccgggcgttgggcagaggagtatctggagcagtcagaggagaagctatgg
ctcggagacctgggagagagggagcaagactggacgaaagagtacctaccaggagacgaa
ctgaagcaaacagccaatgagctggtcgcaaaggtcaatgaccccaagttgcagaacact
gagttcctgcggttcattaggcagattggcgagggcagtgtcacagtggaggacagagca
ggcaaacagcacacagatagagctcaggccaaggaggctcagaactgggcctccaacctc
aaccagttcctggaggagactgggggagggactttaccctcgacaacccaagagtgggat
cagaagattgccaaagctaaggctaaacaggcacatcaatgggcttctgtcgtcaagcag
gtctcagtggagtcagcagaatcatgggtagatgagtttgccactggaggtccagatttc
cagcaagctaaagctgctgtggagagcgacttggacttctgggagaagctgcagcaggag
tgggaggagatggccaagagagatgcagaaagtcacccctggctctccgattttgaccag
atgctcagtagctcctacgacaaggggtaccagtttgaggaggacaacccgtacatgtcc
caccaggacccccttgctgagggggtgaggaggatggaggcaggggacatccctggggcc
gtgcgcctgtttgagagcgccgtacagagagaaccagacaaccagctggcatggcaatat
ctgggaacctgtcaggcagagaacgaacaagagtttgcagccatcagtgccctccgcaga
tgcatagagttgaagaaggacaacctgaccgctctgatggcactggccgtcagtttcacc
aacgaatcgctgcacaggcaggcctgtgagacccttcgcgactggctgaggcacaacccc
gcataccggccagtcctggagcagagtgaacgggagcgagagaaggacggcgggaccaga
gagcgggagagatttggctcactgctgccagattctttgtttacagaggtgcagtccctg
ttcctcagtgcggcgaactctgaccccgcccgcgtcgacccccagctacagtgtggcctg
ggagtcctcttcaatctgagcggggagtatgacaaggccgtggactgtttcacagcagcc
ctctctgtcacaccacaggactacctgctgtggaataaactgggcgctaccctggccaat
ggaagccgctcagaggaggctgttgccgcctacaggagggcgctggaactgcagccaggc
ttcatccgcagtcggtacaacctgggaatcagctgtgtcaacctaggagcccacagagag
gccgtggagcacttcctggaagccctgtccctgcagcggcaggcatcgggggagggcgag
acggtcagtgccagccgggccccagggggtgccgcggccaccatgatgtccgacaacatc
tggtccaccctgcgcatggccttaagcatgatgggagagagctcgctatacgcggcggct
gaccggcgagacctcgacacgctgctctcctacttctgtcagagggagggggaatga
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