Oncorhynchus nerka (sockeye salmon): 115141340
Help
Entry
115141340 CDS
T07952
Name
(RefSeq) peroxisomal targeting signal 1 receptor-like isoform X1
KO
K13342
peroxin-5
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
one00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
115141340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115141340
Membrane trafficking [BR:
one04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
115141340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_11
TPR_8
TPR_16
TPR_17
TPR_14
TPR_19
TPR_CcmH_CycH
TPR_12
TPR_7
TPR_Slam
TPR_20
ANAPC3
TPR_9
TPR_10
MAS20
Connexin50
PEX18_PEX21_C
Motif
Other DBs
NCBI-GeneID:
115141340
NCBI-ProteinID:
XP_029535962
LinkDB
All DBs
Position
LG14:18198795..18218611
Genome browser
AA seq
677 aa
AA seq
DB search
MAMQELVEGECGGANPLMKLTGHMTQEGGAWRHRSTPTIPPTPIEIATEEELVNEFMQQA
PPRPPHSFDMGQLLEEMQQIDQQSYRQAPQRAPGVAALALSGDWTSEFLSGVDAATASSG
QAGLGDPADADWTREFITDGTDPGRWAEEYLEQSEEKLWLGDLGEREQEWTKEYLPGDEL
KQTANELVAKVNDPKLQNTEFLRFIRQIGEGSVTVEDRAGKQHTDRAQAKEAQNWASNLN
QFLEETGGGTLPLTTQEWDQKLAKAKAKQAHQWASVVRQVSVESAESWVDEFATAGPDFQ
QAKAAVESDVDFWEKLQQEWEEMAKRDAESHPWLSDFDQMLSSSYDKGYQFEEDNPYLSH
QDPLAEGVKRMEAGDIPGAVRLFESAVQREPDNQLAWQYLGTCQAENEQEFAAISALRRC
IELKKDNLTALMALAVSFTNESLHRQACETLRDWLRHNPAYRPVLEQSEREREKDRGTRE
SERFGSLLPESLFTEVQSLFLSAANSEPACVDPQLQCGLGVLFNLSGEYDKAVDCFTAAL
SVTPQDYLLWNKLGATLANGSRSEEAVAAYRRALELQPGFIRSRYNLGISCVNLGAHREA
VEHFLEALSLQRQASGEGEKVSASRGPGSTAATMMSDNIWSTLRMALNMMGESSLDVAAD
RRDLDTLLSYFCQAGGE
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgcaggagctggtggagggggagtgcgggggagccaatcccctcatgaagttg
acgggtcacatgacccaggagggaggtgcttggaggcacaggtcaacgccaactattccc
cctacacccattgaaattgcaacagaagaagagttggtgaatgagttcatgcagcaggcg
cctccacggccccctcacagctttgacatgggccagttactggaggaaatgcagcagatc
gatcagcagagctacagacaggctccacagagagctccgggtgtagccgcgttggccctg
tctggtgattggacgtctgagtttctgtcgggagtggatgccgccaccgcctcttcaggg
caggcgggacttggagacccggctgacgctgattggaccagagagttcatcaccgatggc
acagatcccgggcgttgggcagaggagtatctggagcagtcagaggagaagctatggctc
ggagacctgggagagagggagcaagaatggacgaaagagtacctaccaggagacgaactg
aagcaaacagccaatgagctggtcgcaaaggtcaatgaccccaagttacagaacactgag
ttcctgcggttcattaggcagattggcgagggcagtgtcacagtggaggacagagcaggc
aaacagcacacagatagagctcaggccaaggaggctcagaactgggcctccaacctcaac
cagttcctggaggagactgggggagggactttacccttgacaacccaagagtgggatcag
aagcttgccaaagctaaggctaaacaggcacatcaatgggcttctgtcgtcaggcaggtc
tcagtggagtcagcggaatcatgggtagatgagttcgccacagcaggtccagatttccag
caagctaaagctgctgtggagagcgacgtggacttctgggagaagctgcagcaggagtgg
gaggagatggccaagagagacgcagaaagtcacccctggctctccgattttgaccagatg
ctcagtagctcctacgacaaggggtaccagtttgaggaggacaacccgtacctgtcccac
caggacccccttgctgaaggggtgaagaggatggaggcaggggacatccctggggccgtg
cgtctgtttgagagtgccgtacagagagaaccagacaaccagctggcatggcaatatctg
ggaacctgtcaggcagagaatgaacaagagtttgcagccatcagtgccctccgcagatgc
atagagttgaagaaggacaacctgaccgctctgatggctctggctgtcagtttcaccaat
gaatcgctgcacaggcaggcctgtgagacccttcgcgattggctgaggcacaaccccgca
taccggccagtcctggagcagagtgaacgggagcgagagaaggacagagggaccagagag
agtgagagatttggctcactgctgcccgaatctttgtttaccgaggtgcagtccctgttc
ctcagtgcggcgaactctgaacccgcctgcgtcgacccccagctacagtgtggcctggga
gtcctcttcaatctgagcggggagtatgacaaggccgtggactgtttcaccgcagccctc
tccgtcacaccacaggactatctgctgtggaataaactgggcgccacgctggccaatgga
agccgctcagaggaggctgttgccgcctataggagggcgcttgaactgcagccaggcttc
atccgcagtcggtacaacctgggaatcagctgtgtcaacctaggagcccacagagaggcc
gtggagcacttcctggaagccctgtccctgcagcgccaggcgtcgggggagggcgagaag
gtcagtgccagccggggccctgggagcaccgcagccaccatgatgtccgataacatctgg
tccaccctgcgcatggccttaaacatgatgggagagagctcgctagatgtggcggccgac
cggcgagacctcgacacgctgctctcctacttctgtcaggcggggggggaatga
DBGET
integrated database retrieval system
