Oncorhynchus nerka (sockeye salmon): 115141396
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Entry
115141396 CDS
T07952
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 45-like isoform X1
KO
K11844
ubiquitin carboxyl-terminal hydrolase 16/45 [EC:
3.4.19.12
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
115141396
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
one01002
]
115141396
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
one04121
]
115141396
Enzymes [BR:
one01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
115141396
Peptidases and inhibitors [BR:
one01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
115141396
Ubiquitin system [BR:
one04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
115141396
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
Motif
Other DBs
NCBI-GeneID:
115141396
NCBI-ProteinID:
XP_029536068
LinkDB
All DBs
Position
LG14:21290228..21332408
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AA seq
793 aa
AA seq
DB search
MRLKDPFSLKAADMTKRTNKPRKPRDEESSDEVSVLTCQHVSKAVDLNSVKKAVTSSMWS
MCSDCLRERTMIDGEPASGHDILVCLKCGFQGCSQSESQHSTKHHQTLHPESHCITISLG
TWKAWCFECNEELSTHCNKKALAQTLDFLQKHSVKAASGTTSKMIKLREEPSDYADQSRG
KSPVNNSTLVPVKGINNLGNTCFFNAVMQNLSQTHMLNDLIQDVKEKGHKLKICPPAESN
VGALMVTLPSPEPLTSAMFLFLHSMKESGKGPVNPKTLFNQLCQKAPRFKGYQQQDSQEL
LHYLLDSMRVEETKRIKAGILKSFNNPTEKTADDETKRQVKAYGKEGVKMNFVDRIFVGE
LTNTIMCEECEHISTVKEAFIDISLPIIEERMSKPSNPGRTGKSSREQEAHISHGDEMLS
AALNKNSRKLSGQQQQGHKSPGSVEEKGADSPSEESPSVMARAAGVSKMAATSSLSDGSE
KDSGPQDSSNDADSEASESEWTPRHSSGHSHGGRGSTPTQSPTLSALSPRTQHGGAVEQL
VSAVHKINLGPDSADSPSTHCLEDQVEPQPQHPQQSPHSHHQGAFQALSHSYTPCSKECS
VQSCLHQFTSVELLMGNNKLLCESCTDRRQKQLRKSTSAEKKSDKVYTSARKQILISSLP
PVVTLHLKRFHQAGMNLRKVNRHVNFPLILDLAPFCSASCKNLVAGERVLYSLYGIVEHS
GSMRGGHYTAYVKVRSPQRRTEQPQRRNLAGPREASSATQCQWVYVSDTNVQTVPESRVL
NSQAYLLFYEEML
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atgcggctaaaggatcccttctccttgaaagctgccgacatgactaagcggactaacaag
ccgaggaagcctcgagatgaggagtcgtcggacgaagttagcgtgctgacctgccagcat
gtcagcaaggcggtagacctgaactcagtcaagaaggcagtgacctcgagcatgtggtcg
atgtgttcagattgcctgagggaaaggactatgatagatggagagccagccagtggccac
gacatcctcgtatgcctcaagtgcggcttccagggctgtagccagtcagagagccagcac
tccaccaagcaccaccaaaccctccaccctgagtcccattgcatcaccatcagcctcggc
acctggaaggcctggtgttttgaatgtaatgaagagctctccactcactgcaataagaag
gctttggcccagaccctggactttctacaaaagcactctgtcaaggcagcctcaggaaca
acatcgaaaatgatcaagcttagagaggagcccagcgactatgcagaccagtcaagaggg
aagagtccggtcaacaacagcacactggtcccggtcaaaggcatcaacaacctcggaaac
acctgcttctttaacgcagttatgcagaatctgtcccagactcacatgctgaacgatctg
atacaggatgtgaaggagaagggacacaagctgaagatctgcccccctgccgagtcaaat
gtgggggcgttgatggtgactctgcccagcccagagcccctgacctcggccatgttcctc
ttcctacacagcatgaaggagtctgggaagggccctgtcaaccccaagacccttttcaac
cagctctgccagaaggctccacgctttaagggctaccagcagcaggacagccaggagctg
ctccattacctactggactccatgagagtagaggagactaagcggatcaaagcgggcatt
ctgaaatccttcaacaaccccacagagaagactgcagatgatgagaccaaacgccaagtc
aaagcatacgggaaggagggtgtgaagatgaactttgtggatcgcatatttgtgggggag
ttgaccaacaccatcatgtgtgaggagtgtgagcatatctccacagtgaaggaagccttc
attgacatctccctgcccatcattgaggagcggatgtccaagccgtccaacccgggcagg
actgggaagagcagtcgggagcaagaagctcacatctcccacggtgacgagatgctttcc
gcagcgctcaataagaacagcaggaaacttagcggacagcagcagcagggccataagtcc
cctggctctgtggaagagaagggggcagacagcccctcggaggagtccccctccgtaatg
gcccgtgctgcaggagtttccaaaatggccgccaccagcagcctatctgatggcagtgag
aaagactcgggcccccaggacagcagcaatgacgccgacagcgaggcctcggagagcgag
tggaccccccggcactcctcgggccacagccatggtggcagagggtccacccctacccag
tctcccaccctgtccgccctctcccccaggacccagcatggtggtgctgtggagcagctg
gtcagtgcagtgcataagattaacctgggacctgattcagcggactcaccctctacacac
tgtcttgaggaccaggtggagccccagcctcaacatcctcaacagtctcctcactcccac
caccagggggcattccaggccctgtcccacagctatacgccctgctccaaggagtgctcc
gttcagtcctgccttcaccagttcacctcggtggagcttctgatgggcaacaacaagctg
ttgtgcgagagctgcacggaccgccggcagaaacaactgaggaagagcacctcagcagag
aagaagtctgacaaggtgtacaccagcgctcgcaaacagatactgatctcttcgctgccc
ccggtggtcactctgcacctcaaacgcttccatcaggcagggatgaacctacgaaaagtc
aaccgtcacgtcaacttccctctcatcctggacctggctccgttctgctcggcatcctgc
aagaacctggtggcgggggagcgtgtgctctacagcctgtatggcatcgtggaacacagc
gggtcgatgcgcgggggccactacacagcgtatgtaaaggtccgctcgccccagaggaga
accgagcagccacagcgcagaaacctggcaggtccaagggaagcaagcagtgctactcag
tgtcagtgggtttatgtaagtgacaccaatgtccagacggtaccagaatccagggtcctc
aactctcaagcctacctgctgttctacgaggagatgctgtga
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