Oncorhynchus nerka (sockeye salmon): 115141508
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Entry
115141508 CDS
T07952
Name
(RefSeq) U1 small nuclear ribonucleoprotein A-like
KO
K11091
U1 small nuclear ribonucleoprotein A
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115141508
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
one03041
]
115141508
Spliceosome [BR:
one03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
115141508
Complex B
115141508
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Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_5
DUF4523
xRRM
Motif
Other DBs
NCBI-GeneID:
115141508
NCBI-ProteinID:
XP_029536292
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Position
LG14:27178070..27180785
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AA seq
279 aa
AA seq
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MAAPDMRLNHTIYINNLNEKIKKDELKKSLYAIFSQFGQILDILVARSLKMRGQAFVIFK
EVNSASNALRSMQGFPFYDKPMRIGYAKGDSDIIAKMKGTYVERDRKKEKRVKGPEAAGA
KKGVPGTPVVPMGPGVPTPMPGMPPMSGAPRMMQMPGQPPYMPPPGMMPPPGMGPGGMPP
GAMLPGGMMPGQMPHAQVAENPPNHILFLTNLPEETNELMLSMLFNQFPGFKEVRLVPGR
HDIAFVEFDNDVQAGAAREALQGFKITQTNAMKISFAKK
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atggctgctccggatatgcgtctcaaccacaccatatacatcaacaacctcaacgagaag
attaaaaaagatgaactgaaaaagtcgttgtacgccattttctctcagtttggtcaaatc
cttgacattttggttgcccgctccctgaagatgaggggtcaggcctttgtcatcttcaag
gaggtcaacagcgcctccaatgccctgcgttccatgcaggggttcccattctatgacaaa
cctatgcgtattgggtacgccaaaggggattctgacatcatcgctaaaatgaagggcacc
tacgtggagcgcgaccgcaagaaggagaagagggtcaagggcccagaggctgcaggggcc
aagaagggtgtgccaggaacccctgtagtacccatggggcctggagttccaacacccatg
cctggaatgccacccatgagcggggctcctcgtatgatgcaaatgccagggcagccccct
tacatgcccccgccagggatgatgccacctcctgggatgggccctggggggatgccccct
ggtgctatgcttccgggtgggatgatgccagggcaaatgccccacgcccaggttgcagaa
aaccctcccaaccacatccttttcctcaccaacctcccagaggagaccaacgagctcatg
ctgtctatgctcttcaaccagttccctgggttcaaagaggtgcgtctggtacctggtcgc
cacgacatcgcctttgtagagtttgataatgacgtgcaggctggagcggccagggaggca
ctacagggcttcaagatcacccagaccaacgccatgaagatctcattcgccaagaaataa
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