Oncorhynchus nerka (sockeye salmon): 115141546
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Entry
115141546 CDS
T07952
Name
(RefSeq) spectrin beta chain, non-erythrocytic 4-like isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
one00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
115141546
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
one04812
]
115141546
Cytoskeleton proteins [BR:
one04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
115141546
Intermediate filaments
Intermediate filament-binding proteins
115141546
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
TMP_3
Motif
Other DBs
NCBI-GeneID:
115141546
NCBI-ProteinID:
XP_029536365
LinkDB
All DBs
Position
LG14:complement(29550402..29624443)
Genome browser
AA seq
2734 aa
AA seq
DB search
MANASTDLDNAEAQRQLNNNNTRLAGSSGHWETEVTSSKLFECSRIKALAEERDAVQKKT
FTKWVNSHLARVSCRIADLYNDLRDGYMLTRLLEVLSGEMLPRPTRGRMRIHCLENVDKA
LQFLKEQRVHLENVGSHDIVDGNHRLTLGLIWTVILRFQIQVIKIECDDNRETRSAKDAL
LLWCQMKTAGYSEVHIQNFTTCWRDGLAFNALIHRHRPDLIEFHKLIRSNATHNLQQAFN
IAEQNLGLTKLLDPEDVNTENPDEKSIITYVVSYYHYFSKMKALRVEGKRVGKVLDNAIE
GQKMIDRYEALASELLEWIEKTIGIISNQKFANSLTGVQQQLQAFTTYCTIEKPIKFQEK
GNLEVLLFTIQSKLRANNQKPYVPHEGKLISDINKAWERLEKAEHERGVALRQELIRQEK
LELLAQRFDHKTTMRQAWLNENQRLVSQDNFGYDLPAVEAAMKKHEAIEADISSYEERIG
VVVELAGEMETEGYYDIRRISARKENILGQWSLLKELVVGRKTRLEKNLALQKTFQDMVY
MIDWMEDMQVQLLSKDFGKHLLEVDDLLQKHSLQEADITAQAERVQTLNSAALKFTTIEG
YQPCDPQVICNRVNHVSTCLEELKQLAAKRRSELEESQHLWAFFQEVEESEAWIREKSSI
LATQTCGKDLSSVLRLLQKHKTLAGELLAHRSLLQQTMKKGKQILMEKSFGTGGIQERIM
EVKGEWKRLEDQAAQRLGHLQEALNFFQFSTETDDLLAWLQDAYRLVSSEDFGHDEYSTQ
SLLKKHRGVCEAVDKHRMHVVTLRKHMVALPLHYRELDEVQSRMGEAEQLYAEVAEVAVL
RQQWLHDALAVYLMFSEVNACEVWIDEKEQWLNKMEVPERLEDVEVIAHRFESLDQEMNS
LMGRILDVNQIVQQLLDSGHPSSTEVRGCQDHLNSRWNRIVEMVEQKKDHLDSVLRLQNY
LLECAEIKSQIQEKRKAIDATQYVGSDLGGVLALQRRLSTMEGALAVLEPKLLHLQQEAE
ELAISHPAKAMEVLEHFEGISVEWEELKRTLQGCEDSLMVAGRLQQFIQDLDSFLTWLVH
TQTAAASDELPNALEEAERLINHHAALKEEIGRYEEDYDRLQAVNELLEAEEAPLPYAAL
QQWLQKLDVGWNKLLEMWESRREVLVQAHIFHLFLRDVKQAEAFLNNQESALAHVELPAT
VETVEAAIKKHKDFTTTMELNLHRIKAVIEAGESLISQSNIYSDRIRERVDTLANRGNQN
RELAQQWLERLNGQWGLQRLLQDCHELGDWVAEKMLMARDTSRDETQKLHKKWLKHQAFM
AELSQNKEWLEKIEREGQQLIQEKPELSPVVRRKLGEIRECWQDLESTTQAKARQLFEAN
RADQLVQSYASLDHRLHQLEGQLCYVDQGQDLTSVNKQLKKLQTMECQMEEWYKEVGELQ
VAAASIPQQGQVMETVGERQAAVETRIVRLIEPLKERRRILLASKEVHQVGRDLEDEILW
VQERLPAATSQEHGSSLQAVQHLMKKNQTLQRELQGHRARVEDVLERANVIASIRSPEAD
CVRAGLEQLSGLWGLLWAETERRQLVLDAMYQAQQYYFDTAEVEAWLSEQELHMMNEEKG
KDEPSTLQLLKKHLVLEQTVEDYAETIGLLSQQCRQLLEMGHPDSEQISKCQSQMDRLYV
SLKDLVEERKSRLEQQYWLYQLNHEVDELEQWIAEREVVASSPELGQDFEHVTILQEKFT
EFASETGSLGQERVTAVNQMVDELIDYGHAEAATIAEWKDGVNEAWADLLELIETRAQML
AASHQLHKFFTDCREILAQIDDKQRRLPEVRARQGGTANTSTLQRLMHSFEHDIQLLVTQ
VRQLQESAGQLRTIYAGQKAEAIAGREQEVMHCWKELLTSCEECRVQITTATDKLRFFGV
VRDQIMWMDSIISQIGTGDNPSIPHSDITGSGLSGPFRDVSSVEVLMNYHQSLKSEVEAR
SKSVLQCIEMGKTLLAARNPAAEEIKEKLDKVVAKQYELSEKWDKHWEVLQHMLEVHQFA
QEAVVAEAWLTAQEPFINSKELGASVDEVEQLIRRHEAFRKAAATWEERFSSLRRLTTVE
KMKAEQSKLPPTPLLGRKVFLDPQETSPARSQGSPLMRRIIYEQEPLPSLPSSVARRLGS
TVANYTPIMNGSSGYRSSLEAWAMPVMGGVVGGVVGVAAGLGTTAMEARGVATHLGTTTA
MEVRGVAAGLGTAASEARGLAVGLVTPAVEAKGIAASLVTGAATAVEVKASQYLRQPKIK
HMDDMVTPMLVACRLEKVREKEVREREQRERERDILLIEPAPVMPVMAEVVLQEMGREGM
GRERLNSEPSSRDHRAGSSRSEPQQRDRDRDSRDSRDSHREARLERQHSSEVLMIQARRD
ELPQEVWRERAERKERKLERQTSSEQEGHGHEGRRKDRHRTERQESSEHDTAKEQSDRRS
TEKRSGGQTLFDIVEQLKDREAATARGEVPKVPNGVPEKSSGRPDRPRARDRPKPRRRPR
PKDHFAGEATTRRSRSAPEPGMAQSVSPSVLQPPSHTAHHEGFLFRKLDIETMRKSSNSR
SWVNLYCVLNKGEIGFYKDAKNTATPYNNEPMLNLGHCHCDVTLGYKKKKNVFTLKTKDG
SEFLFHAKDESQDDLKAWTTNINKSIAEHVEIAKWGQPQPTTSSTDEGTRRDGSKADNKS
DRGERPERAERSERSDKGETKSDTKRSEKSSKKK
NT seq
8205 nt
NT seq
+upstream
nt +downstream
nt
atggccaatgcctccacagacctggacaacgcggaggcccaacgccagctcaacaacaac
aacacccgtctggccggcagctcgggacactgggaaactgaggtcaccagctccaagctg
tttgagtgttcccgcatcaaggccttggcagaagagagagatgctgtccagaagaagacc
ttcactaagtgggtgaactcccacctggcaagagtgtcctgtcgaatcgctgatctctat
aacgacctccgggacggctacatgctcaccaggctgctggaggtcctgtctggggagatg
ctgccgaggcccacgcggggtcgcatgcgtatccactgcctggagaacgtggacaaggcc
ctgcagttcctcaaggagcagagggtccacctggagaacgtcggctctcacgacatcgtc
gacggcaaccaccgtctcacccttggcctcatctggaccgtcatccttcgcttccagatc
caggtgattaagattgagtgtgacgacaacagggagacgcggtcggcaaaggatgccctg
ctactctggtgccagatgaaaactgctgggtactctgaggtccacatccagaacttcacc
acctgctggagagatggtctcgccttcaacgctctcattcaccgacacaggcctgatttg
attgaattccataagctgatccggtcaaatgccacacacaacctccagcaagccttcaac
atagctgagcagaacctggggctcaccaaactcctggaccctgaagacgtgaatacagag
aacccagatgagaagtcgataataacctatgttgtgtcctactaccattacttctccaag
atgaaagcccttcgagtagagggcaagagagtgggaaaggtgttggacaatgccattgag
ggtcagaagatgatcgatcgatatgaggctctggcctcggagctcctggagtggatcgag
aagaccataggcatcatcagcaaccagaagtttgccaactccttaacgggtgtccagcaa
cagcttcaagccttcaccacctactgcaccatcgagaagcccatcaagttccaggagaag
gggaacctggaagtgctcctctttactatccaaagcaagctcagagctaacaaccagaaa
ccatacgtgcctcatgaagggaaactcatctctgatatcaacaaggcgtgggagaggctg
gagaaggcggagcatgagagaggtgtggccctacgtcaggagctgattcgccaggagaag
ctggagctgctggcccagcggtttgaccacaagaccaccatgagacaggcgtggctcaac
gagaaccagcgcctcgtgtctcaggataactttggctacgacctgccagcggtggaggcc
gccatgaagaagcacgaggccattgaggcagacatctcgtcgtacgaggagcgcatcggg
gtggtggtggagctggctggggagatggagacggagggctactatgacatccggcgcatc
tcggcccgcaaggagaacatcctgggccagtggagcctgctgaaggagctggtggtgggg
aggaagacccggttggagaagaacctggctctgcagaagaccttccaggacatggtctat
atgatcgactggatggaggacatgcaggtccagctcctgtccaaagacttcggcaagcat
ctgctggaggtggacgacctgctgcagaaacacagcctccaggaagctgacatcacagcg
caggcagagagggtgcagacccttaactcagccgctctcaaattcaccaccatcgaaggc
taccagccctgtgacccccaggtgatctgcaaccgggtcaaccatgtcagcacctgcctg
gaggagctcaagcagctggcggccaagcggcgctcggagctggaggagtctcagcacctc
tgggccttcttccaggaggtggaggagtccgaggcctggatccgcgagaagagctccatc
ctggccacccagacctgcggcaaggacctgagcagcgtgctgcggctgctccagaaacac
aagaccctggctggggagctgctggcccaccgctccctcctccaacagaccatgaagaag
ggcaagcagatcctgatggagaagagtttcggcacggggggcatccaggagcgcatcatg
gaggtgaaaggggagtggaagaggctggaggaccaggcagcgcagagactgggccacctg
caggaggcactcaatttcttccagttcagcacagagacggatgacctgctggcctggctg
caggacgcctaccgcctggtttccagcgaggactttggccacgatgagtactccacccag
tcgctgctcaagaagcaccggggtgtgtgcgaggccgtggacaagcaccggatgcacgtg
gtaactctgcgcaaacacatggtggcgctgccactgcattaccgggagctggatgaggtg
cagtcgaggatgggcgaggcggagcagctgtacgccgaggtggccgaggtggccgtcctg
aggcagcagtggctgcacgacgcgctggccgtctacctcatgttcagcgaggtcaacgcc
tgcgaggtgtggatcgacgagaaggagcagtggctcaacaagatggaggttccagagagg
ctggaggacgtagaggtcatagcccacaggtttgagagcctggaccaggagatgaacagc
ctgatgggaaggatcctggacgtgaaccagatagtgcagcagctcctggacagtggtcac
cccagctctacagaggtcagaggctgtcaggaccacctcaacagcagatggaaccgcatc
gtggagatggtggagcagaaaaaggatcacctggactctgtcctccgtctccagaactac
ttgctggagtgtgctgagatcaagtctcagatccaggagaagcgcaaggccatcgacgcc
actcagtacgtgggcagtgacctgggcggggtgctggccctgcagcgccgactctccacc
atggagggggccctggccgtgctggagcccaagctgcttcacctgcagcaggaggcagag
gagctggctatctcgcacccggccaaggccatggaggtcctggagcacttcgagggcatc
agtgtggagtgggaggagctgaagcgcacgctgcagggctgcgaggactctctgatggtg
gcggggcggctgcagcagttcatccaggacctggactccttcctgacgtggctggtgcac
acgcagacggcagcagctagcgacgagctgcccaacgcgctggaggaggccgagaggctg
atcaaccaccacgcggcgctgaaggaggagatcgggaggtacgaggaggactacgatcgg
ctgcaggcggtcaacgagctgctggaggccgaggaggctccgctgccatacgcggcgctg
cagcagtggctccagaagctggatgtgggctggaacaagctgctggagatgtgggagagc
cggagggaggtgctggttcaggcgcacatcttccacctcttcctgagggacgtcaagcag
gccgaggccttcctcaacaaccaggagtcagccttggcccacgttgagctccccgccacg
gtggagacggtggaggctgccatcaagaagcacaaggacttcaccaccaccatggagctc
aacctgcatcgcatcaaggctgtcatcgaggccggagagagcctcattagccagagcaac
atctactcggaccgtatcagggagcgtgtggacaccctcgctaacagaggcaaccagaac
cgggaattggcccaacagtggctggagaggctcaacggccagtgggggctccagaggtta
ctacaggactgccacgagcttggagactgggtggcagagaagatgctcatggctcgtgac
acgtcccgcgatgagacgcagaagctgcacaagaagtggctgaagcaccaggccttcatg
gccgagctgtcccagaacaaggagtggctagagaagatcgagagggagggccagcagttg
atccaggagaagcccgagctgagcccggtggtgcggaggaagctgggggagatccgggag
tgttggcaggacctggagagcaccacccaggccaaggcccgccagctgtttgaagcaaac
cgggccgatcagctggtgcagagctacgccagcctggaccatcggctgcaccagctggag
ggacaactgtgctacgtggaccagggtcaggacctgaccagcgtcaacaagcagctcaag
aagctccagacgatggagtgtcagatggaggagtggtataaggaggtgggggagctgcag
gtggcggcggcctccatcccccagcagggccaggtcatggagacggtcggcgagcgccag
gccgccgtggagacgcgcatcgtccgcctcatcgagccgctcaaggagcgccggcgcatc
cttctggcctccaaggaggttcaccaagtgggccgggacctggaggacgagatactgtgg
gtgcaggagcggctgcctgccgccacgtctcaggagcacggctccagtctccaggctgtg
cagcacctcatgaagaaaaaccagactctgcagagggagctgcagggccatcgggcgagg
gtggaggacgtcctggaacgagctaatgtcatcgcctccatccgcagccccgaggctgac
tgtgtgcgggcgggcctggagcagctcagtgggctgtggggtctgctgtgggccgagaca
gagagaagacagttggtgctggatgccatgtaccaggcccagcagtactactttgacacg
gccgaggtggaggcctggctcagcgaacaggagctgcacatgatgaacgaggaaaagggc
aaggatgagcccagcacactgcagctactgaagaagcacctggtactggagcagacggta
gaggactacgctgagacgataggccttctctcccagcagtgcagacagctactggagatg
ggacatccagacagtgagcagatcagtaagtgtcagtctcagatggaccggctgtacgtg
tctctgaaggacctggtggaggagaggaagtctcgtctggagcagcagtactggctctac
cagctcaaccatgaggtggatgagctggagcagtggatcgctgagagggaagtggtggcc
agctcgccagaactgggacaagactttgaacacgtcacgatcctgcaggagaagtttaca
gagtttgcgtcggagacgggcagtctgggtcaggagcgtgtgacggcggttaaccagatg
gtggatgagctgatcgactatggccacgccgaggccgccaccatcgctgagtggaaggac
ggcgtgaacgaggcctgggccgacctcctggagctcatagagacccgggcacagatgctg
gccgcctcgcaccagctccacaagttcttcaccgactgccgcgagatcttggcccaaatc
gatgataagcagcggaggctgcccgaggtgcgggcgcgccagggtggcactgccaacacc
agcaccctgcagaggctcatgcacagcttcgagcacgacatccagctgctcgtcactcag
gtgaggcagctccaggagagtgcgggtcagctccggaccatctacgccgggcagaaggct
gaggcgattgccggccgggaacaggaagtgatgcattgctggaaggagctcttgacgtcc
tgtgaggagtgccgagtgcagatcaccacggcaacagacaagctgcggttcttcggggtg
gtgcgagaccagatcatgtggatggacagcatcatctctcagatcggcacaggggacaat
ccaagcattccccacagcgatataacgggctctggactctctggtcctttcagggatgtg
tcctcagtggaggtactgatgaactaccaccagagcttgaagagcgaggtggaggcgcgc
agtaagagtgtgctgcagtgcatcgagatgggcaagacactgctggccgcgcgcaaccct
gctgctgaggagatcaaggagaagctggataaggtggtggccaagcagtacgagctgtct
gagaaatgggacaaacactgggaggtcctgcagcacatgctggaggtgcaccagtttgcc
caggaagcggtggtggccgaggcctggctcacggcccaagagcccttcatcaatagcaag
gagctgggtgccagtgtggacgaggtggaacagctcatccgccgccacgaggccttccgc
aaggccgccgccacctgggaggagcgcttcagctcactacgacgcctcaccacggtggag
aagatgaaagcagagcagagtaagctccctcccacccccctgctgggtcgaaaggtgttc
ctggacccccaggagacgtcccctgcccggagccagggctccccactgatgagacggatc
atttacgagcaggaacccttgccctccttgccctcctccgtggcccgccgcttgggatcc
accgtggccaactacacccccatcatgaacggctccagtggctaccgcagcagcctggag
gcctgggccatgcccgtgatggggggagtggttggaggtgtagtgggggtggcagctggc
ctgggaacaaccgccatggaggccagaggggtagcaacacatttagggaccacaactgcc
atggaggtccgaggggtggcagcagggttggggactgccgcctcggaagccagagggttg
gcagtaggattggtcacccccgcggtcgaggccaaagggatagctgcaagcttggtgact
ggtgcagccacggcagtggaggtgaaagcctcacagtacctccggcagcctaagatcaaa
cacatggacgacatggtgacgcccatgctggtggcctgtaggctggagaaggtgagagag
aaggaggtgagagagagggagcagagagagagggagagagatattttgttaatagagcca
gcgccggtgatgccggtgatggccgaggtggtgctccaggagatggggagggaggggatg
ggcagggagaggttgaacagtgagcccagcagcagagaccaccgggcggggagcagccgg
tcggagccccagcagagagacagggacagagacagtagggacagtagggacagtcacagg
gaagccaggctggagcgccagcactctagtgaggtgctgatgattcaggcacggcgggat
gagctgccccaggaggtgtggcgggaacgggccgagcgcaaagagaggaagctggagagg
cagacgtccagcgagcaggaaggccacggacacgaaggccggaggaaagaccgccaccgg
acggagagacaagagtccagtgaacacgacacagccaaggagcagtcagacagacgttct
acggagaaaaggtcaggcggccagaccttgtttgacatagtggagcagctaaaagacaga
gaggcagcaacggcccgaggggaggtccctaaagtgccgaacggcgtgccagagaagtct
tccggacgtccagaccggccgcgagcacgggaccgccccaagccccggcggagacccagg
cccaaggaccactttgcaggagaggccaccacccggcggtcacgctcggcgccagagcca
gggatggcccagagtgtgagcccctcagtcctccagccgcccagccacactgcccaccac
gagggcttcctcttccgcaagctggacatcgagaccatgaggaagagctctaacagcaga
tcctgggtcaacctgtactgtgtgctgaacaaaggagagataggcttctataaggacgct
aagaacaccgccacaccttacaacaacgagcccatgctcaacctcggccactgccactgc
gacgtcacccttggatacaagaagaagaaaaacgtctttacacttaaaacgaaagacgga
agtgaatttctgttccacgcaaaggatgagtcacaggatgatctaaaggcctggaccacc
aacatcaacaagagcatcgcggagcatgtggagattgccaaatggggtcagccccagcct
actacctcatccacggacgagggcacgcgccgcgacggcagcaaggccgataacaagtct
gaccggggggaaaggccggagagggccgagcgctctgagaggtcggataagggtgagacc
aaatcggacaccaagcgttcagaaaagtccagcaagaagaaatga
DBGET
integrated database retrieval system
