Oncorhynchus nerka (sockeye salmon): 115141546
Help
Entry
115141546 CDS
T07952
Name
(RefSeq) spectrin beta chain, non-erythrocytic 4-like isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04517
IgSF CAM signaling
one04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
115141546
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
115141546
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
one04812
]
115141546
Cytoskeleton proteins [BR:
one04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
115141546
Intermediate filaments
Intermediate filament-binding proteins
115141546
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
TMP_3
Motif
Other DBs
NCBI-GeneID:
115141546
NCBI-ProteinID:
XP_029536365
LinkDB
All DBs
Position
LG14:complement(29550402..29624443)
Genome browser
AA seq
2734 aa
AA seq
DB search
MANASTDLDNAEAQRQLNNNNTRLAGSSGHWETEVTSSKLFECSRIKALAEERDAVQKKT
FTKWVNSHLARVSCRIADLYNDLRDGYMLTRLLEVLSGEMLPRPTRGRMRIHCLENVDKA
LQFLKEQRVHLENVGSHDIVDGNHRLTLGLIWTVILRFQIQVIKIECDDNRETRSAKDAL
LLWCQMKTAGYSEVHIQNFTTCWRDGLAFNALIHRHRPDLIEFHKLIRSNATHNLQQAFN
IAEQNLGLTKLLDPEDVNTENPDEKSIITYVVSYYHYFSKMKALRVEGKRVGKVLDNAIE
GQKMIDRYEALASELLEWIEKTIGIISNQKFANSLTGVQQQLQAFTTYCTIEKPIKFQEK
GNLEVLLFTIQSKLRANNQKPYVPHEGKLISDINKAWERLEKAEHERGVALRQELIRQEK
LELLAQRFDHKTTMRQAWLNENQRLVSQDNFGYDLPAVEAAMKKHEAIEADISSYEERIG
VVVELAGEMETEGYYDIRRISARKENILGQWSLLKELVVGRKTRLEKNLALQKTFQDMVY
MIDWMEDMQVQLLSKDFGKHLLEVDDLLQKHSLQEADITAQAERVQTLNSAALKFTTIEG
YQPCDPQVICNRVNHVSTCLEELKQLAAKRRSELEESQHLWAFFQEVEESEAWIREKSSI
LATQTCGKDLSSVLRLLQKHKTLAGELLAHRSLLQQTMKKGKQILMEKSFGTGGIQERIM
EVKGEWKRLEDQAAQRLGHLQEALNFFQFSTETDDLLAWLQDAYRLVSSEDFGHDEYSTQ
SLLKKHRGVCEAVDKHRMHVVTLRKHMVALPLHYRELDEVQSRMGEAEQLYAEVAEVAVL
RQQWLHDALAVYLMFSEVNACEVWIDEKEQWLNKMEVPERLEDVEVIAHRFESLDQEMNS
LMGRILDVNQIVQQLLDSGHPSSTEVRGCQDHLNSRWNRIVEMVEQKKDHLDSVLRLQNY
LLECAEIKSQIQEKRKAIDATQYVGSDLGGVLALQRRLSTMEGALAVLEPKLLHLQQEAE
ELAISHPAKAMEVLEHFEGISVEWEELKRTLQGCEDSLMVAGRLQQFIQDLDSFLTWLVH
TQTAAASDELPNALEEAERLINHHAALKEEIGRYEEDYDRLQAVNELLEAEEAPLPYAAL
QQWLQKLDVGWNKLLEMWESRREVLVQAHIFHLFLRDVKQAEAFLNNQESALAHVELPAT
VETVEAAIKKHKDFTTTMELNLHRIKAVIEAGESLISQSNIYSDRIRERVDTLANRGNQN
RELAQQWLERLNGQWGLQRLLQDCHELGDWVAEKMLMARDTSRDETQKLHKKWLKHQAFM
AELSQNKEWLEKIEREGQQLIQEKPELSPVVRRKLGEIRECWQDLESTTQAKARQLFEAN
RADQLVQSYASLDHRLHQLEGQLCYVDQGQDLTSVNKQLKKLQTMECQMEEWYKEVGELQ
VAAASIPQQGQVMETVGERQAAVETRIVRLIEPLKERRRILLASKEVHQVGRDLEDEILW
VQERLPAATSQEHGSSLQAVQHLMKKNQTLQRELQGHRARVEDVLERANVIASIRSPEAD
CVRAGLEQLSGLWGLLWAETERRQLVLDAMYQAQQYYFDTAEVEAWLSEQELHMMNEEKG
KDEPSTLQLLKKHLVLEQTVEDYAETIGLLSQQCRQLLEMGHPDSEQISKCQSQMDRLYV
SLKDLVEERKSRLEQQYWLYQLNHEVDELEQWIAEREVVASSPELGQDFEHVTILQEKFT
EFASETGSLGQERVTAVNQMVDELIDYGHAEAATIAEWKDGVNEAWADLLELIETRAQML
AASHQLHKFFTDCREILAQIDDKQRRLPEVRARQGGTANTSTLQRLMHSFEHDIQLLVTQ
VRQLQESAGQLRTIYAGQKAEAIAGREQEVMHCWKELLTSCEECRVQITTATDKLRFFGV
VRDQIMWMDSIISQIGTGDNPSIPHSDITGSGLSGPFRDVSSVEVLMNYHQSLKSEVEAR
SKSVLQCIEMGKTLLAARNPAAEEIKEKLDKVVAKQYELSEKWDKHWEVLQHMLEVHQFA
QEAVVAEAWLTAQEPFINSKELGASVDEVEQLIRRHEAFRKAAATWEERFSSLRRLTTVE
KMKAEQSKLPPTPLLGRKVFLDPQETSPARSQGSPLMRRIIYEQEPLPSLPSSVARRLGS
TVANYTPIMNGSSGYRSSLEAWAMPVMGGVVGGVVGVAAGLGTTAMEARGVATHLGTTTA
MEVRGVAAGLGTAASEARGLAVGLVTPAVEAKGIAASLVTGAATAVEVKASQYLRQPKIK
HMDDMVTPMLVACRLEKVREKEVREREQRERERDILLIEPAPVMPVMAEVVLQEMGREGM
GRERLNSEPSSRDHRAGSSRSEPQQRDRDRDSRDSRDSHREARLERQHSSEVLMIQARRD
ELPQEVWRERAERKERKLERQTSSEQEGHGHEGRRKDRHRTERQESSEHDTAKEQSDRRS
TEKRSGGQTLFDIVEQLKDREAATARGEVPKVPNGVPEKSSGRPDRPRARDRPKPRRRPR
PKDHFAGEATTRRSRSAPEPGMAQSVSPSVLQPPSHTAHHEGFLFRKLDIETMRKSSNSR
SWVNLYCVLNKGEIGFYKDAKNTATPYNNEPMLNLGHCHCDVTLGYKKKKNVFTLKTKDG
SEFLFHAKDESQDDLKAWTTNINKSIAEHVEIAKWGQPQPTTSSTDEGTRRDGSKADNKS
DRGERPERAERSERSDKGETKSDTKRSEKSSKKK
NT seq
8205 nt
NT seq
+upstream
nt +downstream
nt
atggccaatgcctccacagacctggacaacgcggaggcccaacgccagctcaacaacaac
aacacccgtctggccggcagctcgggacactgggaaactgaggtcaccagctccaagctg
tttgagtgttcccgcatcaaggccttggcagaagagagagatgctgtccagaagaagacc
ttcactaagtgggtgaactcccacctggcaagagtgtcctgtcgaatcgctgatctctat
aacgacctccgggacggctacatgctcaccaggctgctggaggtcctgtctggggagatg
ctgccgaggcccacgcggggtcgcatgcgtatccactgcctggagaacgtggacaaggcc
ctgcagttcctcaaggagcagagggtccacctggagaacgtcggctctcacgacatcgtc
gacggcaaccaccgtctcacccttggcctcatctggaccgtcatccttcgcttccagatc
caggtgattaagattgagtgtgacgacaacagggagacgcggtcggcaaaggatgccctg
ctactctggtgccagatgaaaactgctgggtactctgaggtccacatccagaacttcacc
acctgctggagagatggtctcgccttcaacgctctcattcaccgacacaggcctgatttg
attgaattccataagctgatccggtcaaatgccacacacaacctccagcaagccttcaac
atagctgagcagaacctggggctcaccaaactcctggaccctgaagacgtgaatacagag
aacccagatgagaagtcgataataacctatgttgtgtcctactaccattacttctccaag
atgaaagcccttcgagtagagggcaagagagtgggaaaggtgttggacaatgccattgag
ggtcagaagatgatcgatcgatatgaggctctggcctcggagctcctggagtggatcgag
aagaccataggcatcatcagcaaccagaagtttgccaactccttaacgggtgtccagcaa
cagcttcaagccttcaccacctactgcaccatcgagaagcccatcaagttccaggagaag
gggaacctggaagtgctcctctttactatccaaagcaagctcagagctaacaaccagaaa
ccatacgtgcctcatgaagggaaactcatctctgatatcaacaaggcgtgggagaggctg
gagaaggcggagcatgagagaggtgtggccctacgtcaggagctgattcgccaggagaag
ctggagctgctggcccagcggtttgaccacaagaccaccatgagacaggcgtggctcaac
gagaaccagcgcctcgtgtctcaggataactttggctacgacctgccagcggtggaggcc
gccatgaagaagcacgaggccattgaggcagacatctcgtcgtacgaggagcgcatcggg
gtggtggtggagctggctggggagatggagacggagggctactatgacatccggcgcatc
tcggcccgcaaggagaacatcctgggccagtggagcctgctgaaggagctggtggtgggg
aggaagacccggttggagaagaacctggctctgcagaagaccttccaggacatggtctat
atgatcgactggatggaggacatgcaggtccagctcctgtccaaagacttcggcaagcat
ctgctggaggtggacgacctgctgcagaaacacagcctccaggaagctgacatcacagcg
caggcagagagggtgcagacccttaactcagccgctctcaaattcaccaccatcgaaggc
taccagccctgtgacccccaggtgatctgcaaccgggtcaaccatgtcagcacctgcctg
gaggagctcaagcagctggcggccaagcggcgctcggagctggaggagtctcagcacctc
tgggccttcttccaggaggtggaggagtccgaggcctggatccgcgagaagagctccatc
ctggccacccagacctgcggcaaggacctgagcagcgtgctgcggctgctccagaaacac
aagaccctggctggggagctgctggcccaccgctccctcctccaacagaccatgaagaag
ggcaagcagatcctgatggagaagagtttcggcacggggggcatccaggagcgcatcatg
gaggtgaaaggggagtggaagaggctggaggaccaggcagcgcagagactgggccacctg
caggaggcactcaatttcttccagttcagcacagagacggatgacctgctggcctggctg
caggacgcctaccgcctggtttccagcgaggactttggccacgatgagtactccacccag
tcgctgctcaagaagcaccggggtgtgtgcgaggccgtggacaagcaccggatgcacgtg
gtaactctgcgcaaacacatggtggcgctgccactgcattaccgggagctggatgaggtg
cagtcgaggatgggcgaggcggagcagctgtacgccgaggtggccgaggtggccgtcctg
aggcagcagtggctgcacgacgcgctggccgtctacctcatgttcagcgaggtcaacgcc
tgcgaggtgtggatcgacgagaaggagcagtggctcaacaagatggaggttccagagagg
ctggaggacgtagaggtcatagcccacaggtttgagagcctggaccaggagatgaacagc
ctgatgggaaggatcctggacgtgaaccagatagtgcagcagctcctggacagtggtcac
cccagctctacagaggtcagaggctgtcaggaccacctcaacagcagatggaaccgcatc
gtggagatggtggagcagaaaaaggatcacctggactctgtcctccgtctccagaactac
ttgctggagtgtgctgagatcaagtctcagatccaggagaagcgcaaggccatcgacgcc
actcagtacgtgggcagtgacctgggcggggtgctggccctgcagcgccgactctccacc
atggagggggccctggccgtgctggagcccaagctgcttcacctgcagcaggaggcagag
gagctggctatctcgcacccggccaaggccatggaggtcctggagcacttcgagggcatc
agtgtggagtgggaggagctgaagcgcacgctgcagggctgcgaggactctctgatggtg
gcggggcggctgcagcagttcatccaggacctggactccttcctgacgtggctggtgcac
acgcagacggcagcagctagcgacgagctgcccaacgcgctggaggaggccgagaggctg
atcaaccaccacgcggcgctgaaggaggagatcgggaggtacgaggaggactacgatcgg
ctgcaggcggtcaacgagctgctggaggccgaggaggctccgctgccatacgcggcgctg
cagcagtggctccagaagctggatgtgggctggaacaagctgctggagatgtgggagagc
cggagggaggtgctggttcaggcgcacatcttccacctcttcctgagggacgtcaagcag
gccgaggccttcctcaacaaccaggagtcagccttggcccacgttgagctccccgccacg
gtggagacggtggaggctgccatcaagaagcacaaggacttcaccaccaccatggagctc
aacctgcatcgcatcaaggctgtcatcgaggccggagagagcctcattagccagagcaac
atctactcggaccgtatcagggagcgtgtggacaccctcgctaacagaggcaaccagaac
cgggaattggcccaacagtggctggagaggctcaacggccagtgggggctccagaggtta
ctacaggactgccacgagcttggagactgggtggcagagaagatgctcatggctcgtgac
acgtcccgcgatgagacgcagaagctgcacaagaagtggctgaagcaccaggccttcatg
gccgagctgtcccagaacaaggagtggctagagaagatcgagagggagggccagcagttg
atccaggagaagcccgagctgagcccggtggtgcggaggaagctgggggagatccgggag
tgttggcaggacctggagagcaccacccaggccaaggcccgccagctgtttgaagcaaac
cgggccgatcagctggtgcagagctacgccagcctggaccatcggctgcaccagctggag
ggacaactgtgctacgtggaccagggtcaggacctgaccagcgtcaacaagcagctcaag
aagctccagacgatggagtgtcagatggaggagtggtataaggaggtgggggagctgcag
gtggcggcggcctccatcccccagcagggccaggtcatggagacggtcggcgagcgccag
gccgccgtggagacgcgcatcgtccgcctcatcgagccgctcaaggagcgccggcgcatc
cttctggcctccaaggaggttcaccaagtgggccgggacctggaggacgagatactgtgg
gtgcaggagcggctgcctgccgccacgtctcaggagcacggctccagtctccaggctgtg
cagcacctcatgaagaaaaaccagactctgcagagggagctgcagggccatcgggcgagg
gtggaggacgtcctggaacgagctaatgtcatcgcctccatccgcagccccgaggctgac
tgtgtgcgggcgggcctggagcagctcagtgggctgtggggtctgctgtgggccgagaca
gagagaagacagttggtgctggatgccatgtaccaggcccagcagtactactttgacacg
gccgaggtggaggcctggctcagcgaacaggagctgcacatgatgaacgaggaaaagggc
aaggatgagcccagcacactgcagctactgaagaagcacctggtactggagcagacggta
gaggactacgctgagacgataggccttctctcccagcagtgcagacagctactggagatg
ggacatccagacagtgagcagatcagtaagtgtcagtctcagatggaccggctgtacgtg
tctctgaaggacctggtggaggagaggaagtctcgtctggagcagcagtactggctctac
cagctcaaccatgaggtggatgagctggagcagtggatcgctgagagggaagtggtggcc
agctcgccagaactgggacaagactttgaacacgtcacgatcctgcaggagaagtttaca
gagtttgcgtcggagacgggcagtctgggtcaggagcgtgtgacggcggttaaccagatg
gtggatgagctgatcgactatggccacgccgaggccgccaccatcgctgagtggaaggac
ggcgtgaacgaggcctgggccgacctcctggagctcatagagacccgggcacagatgctg
gccgcctcgcaccagctccacaagttcttcaccgactgccgcgagatcttggcccaaatc
gatgataagcagcggaggctgcccgaggtgcgggcgcgccagggtggcactgccaacacc
agcaccctgcagaggctcatgcacagcttcgagcacgacatccagctgctcgtcactcag
gtgaggcagctccaggagagtgcgggtcagctccggaccatctacgccgggcagaaggct
gaggcgattgccggccgggaacaggaagtgatgcattgctggaaggagctcttgacgtcc
tgtgaggagtgccgagtgcagatcaccacggcaacagacaagctgcggttcttcggggtg
gtgcgagaccagatcatgtggatggacagcatcatctctcagatcggcacaggggacaat
ccaagcattccccacagcgatataacgggctctggactctctggtcctttcagggatgtg
tcctcagtggaggtactgatgaactaccaccagagcttgaagagcgaggtggaggcgcgc
agtaagagtgtgctgcagtgcatcgagatgggcaagacactgctggccgcgcgcaaccct
gctgctgaggagatcaaggagaagctggataaggtggtggccaagcagtacgagctgtct
gagaaatgggacaaacactgggaggtcctgcagcacatgctggaggtgcaccagtttgcc
caggaagcggtggtggccgaggcctggctcacggcccaagagcccttcatcaatagcaag
gagctgggtgccagtgtggacgaggtggaacagctcatccgccgccacgaggccttccgc
aaggccgccgccacctgggaggagcgcttcagctcactacgacgcctcaccacggtggag
aagatgaaagcagagcagagtaagctccctcccacccccctgctgggtcgaaaggtgttc
ctggacccccaggagacgtcccctgcccggagccagggctccccactgatgagacggatc
atttacgagcaggaacccttgccctccttgccctcctccgtggcccgccgcttgggatcc
accgtggccaactacacccccatcatgaacggctccagtggctaccgcagcagcctggag
gcctgggccatgcccgtgatggggggagtggttggaggtgtagtgggggtggcagctggc
ctgggaacaaccgccatggaggccagaggggtagcaacacatttagggaccacaactgcc
atggaggtccgaggggtggcagcagggttggggactgccgcctcggaagccagagggttg
gcagtaggattggtcacccccgcggtcgaggccaaagggatagctgcaagcttggtgact
ggtgcagccacggcagtggaggtgaaagcctcacagtacctccggcagcctaagatcaaa
cacatggacgacatggtgacgcccatgctggtggcctgtaggctggagaaggtgagagag
aaggaggtgagagagagggagcagagagagagggagagagatattttgttaatagagcca
gcgccggtgatgccggtgatggccgaggtggtgctccaggagatggggagggaggggatg
ggcagggagaggttgaacagtgagcccagcagcagagaccaccgggcggggagcagccgg
tcggagccccagcagagagacagggacagagacagtagggacagtagggacagtcacagg
gaagccaggctggagcgccagcactctagtgaggtgctgatgattcaggcacggcgggat
gagctgccccaggaggtgtggcgggaacgggccgagcgcaaagagaggaagctggagagg
cagacgtccagcgagcaggaaggccacggacacgaaggccggaggaaagaccgccaccgg
acggagagacaagagtccagtgaacacgacacagccaaggagcagtcagacagacgttct
acggagaaaaggtcaggcggccagaccttgtttgacatagtggagcagctaaaagacaga
gaggcagcaacggcccgaggggaggtccctaaagtgccgaacggcgtgccagagaagtct
tccggacgtccagaccggccgcgagcacgggaccgccccaagccccggcggagacccagg
cccaaggaccactttgcaggagaggccaccacccggcggtcacgctcggcgccagagcca
gggatggcccagagtgtgagcccctcagtcctccagccgcccagccacactgcccaccac
gagggcttcctcttccgcaagctggacatcgagaccatgaggaagagctctaacagcaga
tcctgggtcaacctgtactgtgtgctgaacaaaggagagataggcttctataaggacgct
aagaacaccgccacaccttacaacaacgagcccatgctcaacctcggccactgccactgc
gacgtcacccttggatacaagaagaagaaaaacgtctttacacttaaaacgaaagacgga
agtgaatttctgttccacgcaaaggatgagtcacaggatgatctaaaggcctggaccacc
aacatcaacaagagcatcgcggagcatgtggagattgccaaatggggtcagccccagcct
actacctcatccacggacgagggcacgcgccgcgacggcagcaaggccgataacaagtct
gaccggggggaaaggccggagagggccgagcgctctgagaggtcggataagggtgagacc
aaatcggacaccaagcgttcagaaaagtccagcaagaagaaatga
DBGET
integrated database retrieval system
