Oncorhynchus nerka (sockeye salmon): 115141602
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Entry
115141602 CDS
T07952
Name
(RefSeq) sodium-dependent serotonin transporter-like
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
115141602
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
one02000
]
115141602
Transporters [BR:
one02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
115141602
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GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
115141602
NCBI-ProteinID:
XP_029536487
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Position
LG14:31059522..31087361
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AA seq
644 aa
AA seq
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MEMKQSMMMDRENEGGEKEKGEEPSQENGRLMLADGGVAEKGDPKVNSGGGSGGVSNGYP
TSTAQSPKEGAEGVPTGAPRTLVVQQTSLDRPRETWSKKMDFLLSVIGYAVDLGNVWRFP
YICYQNGGGAFLLPYMLMAVFGGVPLFYMELALGQFHRSGCISIWKHICPIFKGIGFAIC
IIALYIAFYYNTIMAWALYYLLASFRPTLPWTTCSNPWNTVNCLRYLSTDSNVTWTNTSI
SPAEEFYTRQVLQVHLSPGLHQLGSVSWQLALCLLFIFTIVYFSIWKGVKTSGKVVWVTA
TFPYLVLLVLLVRGATLPGAWRGVVFYLKPDWGKLLSTTVWIDAAAQIFFSLGPGFGVLL
AFASYNPFHNNCYKDALLTSSVNCLTSFLSGFVIFTVLGYMAEMRKIGVETVAKDAGPSL
LFIIYAEAIANMPAATFFAIIFFLMIIMLGLDSTFAGLEGVITAMLDEFPQLLSRRREWF
VLGLVCVCYLGALSTLTYGGAFVVKLFEEYATGPAVITVVFLEVIAVSWFYGTSRFCADV
HMMLGFSPGLFWRVCWVAICPIFLLFIIVSFLAFPPEVKLFDYIYPPWTTVLGYCIGVSS
FICVPAYMVYHLLTAKGTFKQRLLKGITPVPSGPHSDIIITHAV
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atggagatgaaacagtcaatgatgatggacagagagaatgaaggaggggagaaagagaaa
ggggaggagccatcgcaggagaacggcagactcatgctggctgacggaggggtggcagag
aagggggaccccaaagtgaactctggtggggggtcaggaggggtgtccaacgggtacccc
acgtccacagcacagagcccaaaggagggagcggaaggtgtacccacaggggcccccagg
actctagtggtccagcagaccagtctggaccggccccgggagacctggagcaagaagatg
gactttctgttgtctgtgattggctacgccgtggacctgggaaatgtgtggcgcttcccc
tacatctgctaccaaaacggcggaggtgccttcctgctgccctacatgttgatggcggta
ttcggtggtgtgcctctgttctacatggagctggctctggggcagttccaccgcagcggc
tgcatctccatctggaaacacatctgccccatcttcaagggtatcggcttcgccatctgc
atcatagcgctgtacattgcgttctactacaacaccatcatggcgtgggccctgtactac
ctgctggcgtcgttccggcccaccctgccctggaccacgtgctccaacccctggaacacg
gtcaactgtctccgctacctgtccaccgacagcaacgtcacctggaccaacacgtccatc
tcgcccgccgaggagttctatacgcgtcaggtactgcaggtacacctgtctccaggtctg
caccagcttggcagtgtgagttggcagctggctctctgcctcctgttcatcttcaccatc
gtctacttcagcatctggaagggagtcaagacctctggcaaggtggtgtgggtgacagcc
accttcccctaccttgtcctgctggtgctgctcgttcgtggggccactctacccggagcc
tggaggggcgtggtcttctacctcaaacctgattgggggaaactactcagcaccacagta
tggattgatgctgcagctcagatcttcttctctctggggccaggtttcggggttctcctg
gcctttgccagctacaacccctttcacaacaactgttacaaggatgcgttgctgaccagc
tctgtgaactgcctgactagtttcctctctgggtttgtcatctttaccgtgctcggctac
atggctgagatgcgcaaaataggcgtggagaccgtagccaaggatgctggtcccagtctg
ctgttcatcatctatgctgaagccatcgccaacatgcccgctgccaccttcttcgccatt
atcttcttcctcatgatcatcatgctggggctggacagcacgtttgccggtctggagggg
gtgatcacagccatgctggatgagttcccccagttgttgtctaggaggagggagtggttt
gtcctgggcctggtgtgtgtctgctacctgggagcgctctccaccctcacctacggaggt
gcgtttgtggtgaaactgtttgaggagtacgccacgggacctgctgtcatcactgtggtc
ttcctagaagtcatcgccgtttcctggttctacggcacgagtcgtttctgtgctgatgtc
catatgatgctgggattctctcctggattgttctggagggtgtgctgggtggccatctgc
ccaatattcctactgttcatcattgtcagtttcctggcgttccccccggaggtcaagttg
tttgactacatctacccaccttggacaacagttctgggctactgcatcggagtgtcctcc
ttcatctgtgtaccagcctacatggtgtaccacctgctcactgccaaagggacctttaaa
cagcgtctcctgaagggcatcacccctgtacccagtgggcctcacagtgacattatcatc
acccacgccgtctga
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