Oncorhynchus nerka (sockeye salmon): 115141629
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Entry
115141629 CDS
T07952
Name
(RefSeq) RNA-binding protein Musashi homolog 1-like isoform X1
KO
K14411
RNA-binding protein Musashi
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
115141629
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
one03019
]
115141629
Messenger RNA biogenesis [BR:
one03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
115141629
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
PHM7_cyt
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
115141629
NCBI-ProteinID:
XP_029536542
LinkDB
All DBs
Position
LG2:complement(47005444..47051644)
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AA seq
347 aa
AA seq
DB search
MDTEGSQSSLSSVDNSPHDPCKMFIGGLSWQTTQEGLNEYFCKFGEVKECMVMRDPVTKR
SRGFGFVTYIDQAGVDKVLAQNRHELDSKTIDPKVAFPRRAQPKLVTRTKKIFVGGLSVN
TTIEDVKQYFDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDMVEKVCEIHFHEINNKMV
ECKKAQPKEVMSPTGTARGRARIMPYGVDAFMLGIGMLSYPGFQAATYASRSYPGIAPGY
TYQFPEFHLERTPLLTSPHPSELTAIPLSAYGPMAAAAAAAMRGSTQSRNSGYLGTSSPG
PMADLYAAASQDSAVSSYLSTASPGPNSGFGHGLGGPLIAAFTNGYH
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atggatacggaagggagccaaagcagcctgtcctcggtggacaactccccccacgaccct
tgcaaaatgttcatcgggggtctcagttggcagacaacacaagagggtttgaatgaatac
ttctgcaaattcggcgaggtgaaggagtgtatggtgatgcgagatccagttacgaagaga
tcaaggggattcgggtttgtcacatacatagaccaagctggtgtggataaagttttggcg
caaaacagacatgagctggattctaaaacaattgatcccaaggtagcgtttcctcgtaga
gcccagcccaagctggtgaccaggacaaagaagatatttgtgggaggtctctctgtgaac
acaaccatcgaagacgtcaagcagtactttgaccagtttggaaaggttgatgatgccatg
ctcatgttcgacaaaaccaccaacagacacagaggtttcggctttgtgacctttgagaat
gaagacatggtggaaaaagtgtgtgagatccacttccacgaaatcaacaacaaaatggtg
gagtgcaagaaagcccagcccaaggaagtgatgtcaccgacgggtacggctcgaggtcgt
gccaggattatgccctacggcgtggacgctttcatgctggggatcggcatgctgagctac
ccaggcttccaagcagctacgtacgctagccgcagctaccctggcatcgctcctggatac
acctaccagttccctgaattccatttagagaggaccccccttctgacatcaccccacccc
tctgagctcacagccattccactgtcagcctacggaccaatggcagcggcagcagcagct
gctatgagaggttccacccagtcacgtaactcaggctacctgggcaccagcagccctggg
ccaatggctgacctgtatgcagcagcaagtcaagactcagcagtcagcagctatctcagc
acagccagtcctggccccaactcaggatttggccacggtctcgggggtcctctgatcgca
gcctttaccaacgggtaccactaa
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