KEGG   Oncorhynchus nerka (sockeye salmon): 115141630
Entry
115141630         CDS       T07952                                 
Symbol
pnkp
Name
(RefSeq) bifunctional polynucleotide phosphatase/kinase isoform X1
  KO
K08073  bifunctional polynucleotide phosphatase/kinase [EC:3.1.3.32 2.7.1.78]
Organism
one  Oncorhynchus nerka (sockeye salmon)
Pathway
one03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:one00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    115141630 (pnkp)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:one01009]
    115141630 (pnkp)
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:one03400]
    115141630 (pnkp)
Enzymes [BR:one01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.1  Phosphotransferases with an alcohol group as acceptor
    2.7.1.78  polynucleotide 5'-hydroxyl-kinase
     115141630 (pnkp)
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.3  Phosphoric-monoester hydrolases
    3.1.3.32  polynucleotide 3'-phosphatase
     115141630 (pnkp)
Protein phosphatases and associated proteins [BR:one01009]
 HAD phosphatases
  Other HAD phosphatases
   115141630 (pnkp)
DNA repair and recombination proteins [BR:one03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     115141630 (pnkp)
SSDB
Motif
Pfam: PNK3P FHA_2 AAA_33 Hydrolase_6
Other DBs
NCBI-GeneID: 115141630
NCBI-ProteinID: XP_029536538
LinkDB
Position
LG14:complement(32803232..32809353)
AA seq 610 aa
MDTLRLLSLQMQQCTLVSASGAHVPLADGRAVILGRGPETGVIDKKCSRHQVKLVACYAD
KEVLVTQLGPNPSSLGSESLGRGQSGRLTHDRTLYLVNQSHPFRVQFSASNETSSSSAQK
GKVVERLKALDKTKGGKNDRGREVQSTVPKRSIQDFFASSPKKASKRLHSSEEPPQEKRR
RTTGSDSGGEDEAEKLAEEKLRQLQEMSESASGASRDCVQQQASVSACSRSHWQQIGNLM
LYTAVGVTGSTKIAGFDIDGCIITTNSGKVFPTSPDDWRILFPEIQPKLASLLKKGYKVV
FFTNQMGISRGKLKPEDFKSKVETILKTLQLPVQVFVASGPGIYRKPVMGMWEHLCEKDN
GGVAVDKSQSLYVGDAAGRPVNWAPGKKKKDFSCSDRLFALNLGLQFHTPEEFFLGWKTA
PFSLPPFDPRKCDSNARLYDPPNACLTSTKQEVIIAVGFPASGKSTFFHTHIVPKGYVYV
NRDTLGSWQSCVSACERALKEGRSVAVDNTNPDLESRKRYVDVSQSLGVSCRCFNFSASL
EQAKHNNRFREMAPSTTKHLKVNDMIFHSYKKKFVAPSLSEGFSEILQIHFVPTFTDSQS
EALFRQFSEG
NT seq 1833 nt   +upstreamnt  +downstreamnt
atggacaccttacgtctcttgtctttgcagatgcagcagtgcacattagtcagtgcatcc
ggcgctcatgtcccacttgccgatggccgagccgtgatcctaggtcgtggtccagagact
ggagttattgacaagaagtgctcccgacaccaggtgaagctggtggcctgttatgcagac
aaggaggtacttgtaacacagcttggccccaacccctcatccttgggcagtgagagtctt
ggtagaggccagtctggccgactgacccatgaccgcaccctctacctggttaaccagagc
caccccttcagagtgcagttctctgcttccaacgaaacctcctcatcctctgcccagaag
gggaaggttgtagaaaggttgaaagcattggataagacaaaaggaggaaagaacgacaga
gggagggaggttcaaagcacagttcccaaacgcagcatccaagacttttttgcttcctct
cccaagaaggcatccaagaggctacacagttctgaggagcccccgcaggagaagcgtagg
aggactacaggctccgacagtgggggcgaggacgaggctgagaagcttgctgaggagaag
ctccgacagctccaggagatgtcagagagtgcttcaggggctagcagagactgtgtccag
cagcaggcatcagtctcagcctgttctcgaagccactggcagcagattggaaacctcatg
ctctacactgctgttggcgtcactggaagcaccaagattgctggattcgacattgacggg
tgtatcatcaccaccaattctggcaaagtgtttcccaccagcccagatgactggaggatt
ctctttcccgagatccaacccaaactggccagcttattaaagaaaggctacaaggttgtg
tttttcaccaatcagatgggtatatctagggggaaactgaagcctgaggatttcaagtct
aaagtggagaccattctgaagacattacagctccccgtacaggtctttgtggcgtctggt
cctgggatctacaggaagccagtgatggggatgtgggagcacctgtgtgagaaggataat
ggcggcgtggctgtagacaaaagccagagtctctatgtgggagatgcagcgggacggcct
gttaactgggctcctggcaagaagaagaaggacttctcctgcagtgaccgactgtttgct
ctgaaccttggactgcagttccacactccagaggagttcttcctgggctggaagaccgcc
cccttcagtcttcctccatttgaccctaggaaatgtgactctaacgcccgtctatatgac
ccgcccaatgcctgcctcacctccaccaagcaggaagtaatcattgccgtgggtttccct
gcttccgggaaatcaacctttttccacacacacattgtccccaaaggttacgtgtacgtg
aaccgggataccctgggctcttggcagagctgtgtttcggcctgtgagcgggcactgaag
gaggggcgcagtgtggcggtggataacaccaacccagaccttgagtctcgcaaacggtat
gttgacgtcagccagagtttgggcgtgtcctgtcggtgcttcaacttctctgcctccctg
gagcaggccaagcacaacaacagattccgtgagatggccccctccaccaccaagcacctc
aaagtcaatgacatgatcttccacagttacaagaagaagtttgtggcgcccagtctctcg
gaaggcttttcagaaatcctgcaaattcattttgtcccaacctttacagacagccaatca
gaggccctcttcaggcagttctctgaaggctga

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