Oncorhynchus nerka (sockeye salmon): 115141752
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Entry
115141752 CDS
T07952
Name
(RefSeq) FRAS1-related extracellular matrix protein 2-like
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
115141752
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
one04091
]
115141752
Lectins [BR:
one04091
]
C-Type lectins
Lecticans
115141752
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Calx-beta
Cadherin_4
Big_9
TMEM154
FAM176
Motif
Other DBs
NCBI-GeneID:
115141752
NCBI-ProteinID:
XP_029536783
LinkDB
All DBs
Position
LG14:37524846..37642316
Genome browser
AA seq
3151 aa
AA seq
DB search
MALIISPRWKRQGTGAVFLLSALIAVIVTGDSAAQVFDSYGLSYALRSELSEDAILVANN
GIRVPFGRAVFIDPINDLVIQVQPGDRCSMTVLDNDPLSQRPGQLSPKKFPCEFGPNDVK
YSHFGSRSPPRDRVRLQLRYDTHTDTIIIPFMMEVEVIFTQLEVLTRNMPLTVDKLLGTS
NPIDRKILEFTYDRSEHQCKITSLSSGSALPRYGKLVDEGKLGEMVDCDEFIKMNICYQH
TSAHKSPNRDYFPMIVELQDKEGNLLKQEFFQMMVRIKDGEENTAPKPSFVAMMMMEVDQ
FVMTAITPDMLAAEDIESNPDDLIFNITTPLSFEEGYIVSTDDRNLPITSFYQGDLKELK
IAYKPPSVDSETERIFQIEFEVVDTDGAVSDPFAFMIVVKPMNTLAPVVTRNTGQLLYEG
QSRPLSSSHNLGVSDEDDLDNVRITVVDGLRHGQLTVLGSLRKFFTPADLDGGMVIYQHD
GSDTYSDNIIFRMTDGKHEVEFLFPLTIVPTDDEPPIINANTGLILFKNQIMLISPLTLS
AADIDSEDSTIRFTIEAPFSPIGEVLLRQSEAPADPFTWRFNAEDELYEKEVTDWLQQDI
TDGKLFYRHTGPHSTDTVMDQFVFRVQDDNDPPNQSEQSSFIIKILPVDDISPELYPGTT
LQMTVHEYQLTYFRKKFLRYTDLHSEDRDLKYTVTQPPTDTDENSPVVLGSIVLTESPDT
VVTEFTQAQVNHHKISYNPPDLELGITAHVLQVQYTVEDTSGNTVIGTFSIFLQPVDNKP
PQITNTGFTIFERGTHIITRAELDTVDLDTDRSQISFTVTQPPQHGTVQYTFTDLTKGDQ
FNLLDIANDRISYIHNGDESTSDFFQLDVSDGVHVVTITIRVTVKPIDDETPTITLPAGT
IGSYIDVLENGATEITTNVIQGRDEDTDDLRLTFILEDPPVLGEILVNGVQSGSFTQADI
INGLVVYTHTSGEIGLTTKYDYFNLTLTDMSDEWTVGGNRVTGVRVQITILPMDSQAPEV
FVGPQFTVVEGEKNVIEILHISADDIDTPNDDLLCTIIVQPTSGYVENISPAPGSEKSRS
GTAISAFTIKDIRQNHIYYVQSIHKGVEPVEDRFTFRCSDGINFSERHFFPIAIIPSNDE
KPEIYMREFVVMEGMNIVIDTPILNGADADIPSDELTFIITKPPKHGFILNQLTTDTVTV
TNFTLDQIREASSIVYEHDDSETKEDSFDLILTDGKYTVEKTIIVMIIPVDDETPRMAIN
DGLELEIGDVKVIDNNVLKATDLDSEDSTLTYVVRYGPGQGLLQRRTPYGTLENITVGMN
FTQYQVDQALIVYIHNGQEGIRDLIKFDVTDGINPLIDRYFYVTVGGIDMVFPDVVSKGV
SLKEGGRVTLTTDLLSTSDLNSPDEHLVFTITRAPQRGHLECTDGPGMPISSFTQLQLAG
SKVYYIHTADDEVKMDSFEFEVTDGYNPVFRTFRVSITDVDNKKPVLTVHSLVVNEGENK
LITPFELTAEDRDTADRLLKFTVTQVPVHGRLLFNNTRPVTSFTKQDLNENLISYKHDGT
ESSKDSFSFTVTDGTHTDFYVFPDTVFETRRPQMMKITVLSVDNGVPQIVVNKGGPTLRV
LETGHLGFLITSKTLKAEDRDSLQLSVTFKITVGPEHGYLINLGTGNATVTTFTQAEIDD
MKICYILRDGGNATSDIFYFSIEDNGGNRLKNQVFRLNWAWVSLEKEYYVVDEEAKYLEV
VLKRRGYLGETSFVSIGTRDGTAEKDKDFRGKAQKQVQFNPGQTMATWRVRILQDGVYEQ
SEAFQIVLSEPVMAALEFPDTGTVEILDPADESTVFIPSAVYPVEEDIGELLIPVRRSGD
ITQELMVICYTQQATATGTIPTTVLSYSDYISRPEEHNSVLRFDKGEMEKSCRVVIIDDS
LYEEEESFNVTLSMPMGGCLGQEYHTARVTIIPDLDDAPGFYFGDTDYRVDESDGYVEVK
VYRTGTDLSKTATVTVRSRKTDPVSAEAGVDYVGISRNLDFAPGVSQQTFRVTILDDLGQ
PVLEGTETFELVLRMPMNGILGEPGKATILINDSVSDLPKVQFRDAMYMGHENSGQISVV
VYRSGDISYRSTVRCYTRQGTAQVMMDFNERPNTDASIITFLPGEVEKPCVLSLVDDTEH
EEEEELRLVLGSPRSESPFGASIGKQNETLVKIKDDADKAIIKFGETKFSVSEPSGAGQV
SMVKIPVLRVGDTSKVSVVRVHTKDGSATSGEDYHPVSEDIEFKEGDTEHYIEVEILFDG
VREMREAFTVHLKPDENMVAETQMSKAIIYIEETNSMADVTFPSVPQVFSLLQYDDTSRA
RHTPPVAGYPVVCVTACNPKYPDYDKTGSICISEHINDTLTRYRWLVSAPTSLDGVTSSM
REVDFDTFFSSSKIITLDSVYFQAGSRVQCAARAVNSNGDEGLELSSFIVSISIEDGMCQ
PRVAGTVGAEPFSAKLRYTGAEDPDLPNLIKITVTMPHIDGMLPVVSTRPMSNFELTLSP
DGTRVGNHRCSNLLDYTEVKTRHGFITNATKNPEVIGETSPYQYSTPLRGSSVLRFYKNL
NLEACLWEFTSYYDMSELLSDCGGTIGTDGQVLNLVQSYVTLRVPLHVSYVFHSPVGAGG
WQHFDLQSELRLTFVYDTAILWRDGIGSPPEAELQGALYPTSMRINEQGRLVVNFRTEAR
FRGLFVISHSASSLSSMVMCADHPGVTFNLSLVRSEPTYNQPMQQWTFTSDFAVRDYSGT
YTVKLLPCTSPPSLEYSLPPVCNPREPVTFDLDIRFQQVSDPVAAEFSLNTHMLLLSKRT
LWLSDGSMGFGQESDTAFSQGDMIYGRVMVDPVQNLGDSFICNIEKVFLCTGADGYVPKY
NPNNNEYGCLADAPSLLYRFKIIDKAQPETQARSFGNVGFRALLAVDDPRALALVRQPGS
DGFSMDSTALFQVSAGREWFIHTIYTVRSRENANRGIGKRSLEYHTLTQHSSLAAGGHSL
TQHSSMDRETQHQTMAAGGPSQSQFRSRRSANRVPDLTEDIGLDNNRGTNILHIALDLSR
QRRTSPDREVLTRGVVPRELNHPEESEDSLVLIIGILVGLLLTILIIIVIVISVRSRQEK
KKMEVPTTTSSSTEPMVTSGFTCGGLDSSEV
NT seq
9456 nt
NT seq
+upstream
nt +downstream
nt
atggctttgattatttccccgcggtggaaacgccaagggactggcgctgtttttctgctc
tctgctttgatcgcggtgattgtgacaggtgactcggccgcgcaggttttcgacagttat
ggattatcatacgcgttgagatcggaactatcagaggatgctatattggtggccaacaat
ggaatacgcgtgcctttcgggagagcagtattcattgatcctatcaatgatctggtaatc
caagtacagccgggagacagatgtagtatgacggttctggataacgacccgctctcccag
aggcccgggcagctctcccccaaaaagtttccctgtgagtttggacccaatgacgtaaag
tattctcacttcgggtccaggagccctccgcgggatagggtgaggctacagctcagatat
gacactcataccgacaccataatcatcccgtttatgatggaagtggaggtgattttcaca
cagttggaagtgttaaccagaaacatgcctctgactgttgacaaactgcttggcactagt
aaccccattgacaggaagattctggagttcacctacgatagaagtgaacatcagtgtaaa
ataacgtctctctctagtggcagtgcattacccaggtatggaaaacttgtggatgaggga
aaacttggagaaatggtggattgtgatgaatttattaaaatgaatatctgctatcagcac
acttctgcacacaaatcacccaatagagattatttcccaatgattgtggaattacaagat
aaagagggtaatctgctgaagcaggagtttttccagatgatggtgcgtataaaggatgga
gaggagaacacggctcctaaacccagctttgtggccatgatgatgatggaggtggatcag
tttgtgatgacagccatcacccccgacatgctggctgccgaggacattgagtctaaccct
gacgaccttatcttcaacatcaccacccccctctccttcgaggaggggtacattgtcagc
acagatgaccggaacctgcccatcacgtctttctaccagggagacctcaaagaactaaag
atagcctacaagcctccgtctgtggactctgagacagaacgtatcttccagatagagttt
gaggtggtggacactgatggggctgtgtctgacccgttcgccttcatgattgtagtgaag
cctatgaacacgcttgctccagtagtcaccaggaatactggtcagcttctctatgagggt
cagtccagaccactgtccagttctcataacctaggggtcagtgacgaggacgacctggat
aatgtcaggatcacggtggtcgacgggctgcggcatggccagctgacggtgctcgggtca
ctcaggaagttcttcaccccggccgatctggacgggggcatggtcatataccagcacgac
ggcagcgacacgtacagcgacaacatcatcttccggatgacggacgggaagcacgaggtg
gagttcctgtttcccctaacgatcgttcccacggacgacgagccgcccattatcaacgct
aacactgggttaatcctcttcaagaaccagattatgctcatttcgccactcacactgagc
gctgcagacatcgactctgaagactccactatcaggttcaccatagaagcaccgttctcg
cctataggggaggtgctgctgaggcagtcagaggccccagcagacccattcacctggagg
tttaatgctgaggatgagctgtatgagaaagaggttacagattggttgcagcaggatatc
acagatgggaaactgttctacagacacactgggcctcacagcactgacacagtcatggac
cagtttgttttccgggtccaggatgataacgacccccctaaccaatcagaacagagctcg
ttcatcatcaagattctgccagtggatgacatatcccctgagttgtatcctggtaccacc
ctccagatgaccgtacacgagtaccagctcacctacttcaggaagaagtttctccgctac
actgacctgcactcagaggacagggatctgaagtacactgtcacccagcccccgacagac
acagatgagaacagccctgtggtactggggtctattgtgttaacagagagtccagacact
gtagtgactgagtttactcaggctcaggtcaaccaccataagatatcatacaacccacct
gacctggagctggggatcacagcccacgttctgcaggtccagtacacggtggaggatacg
tcagggaatactgtcatcggaacgttctctatattcctgcagcctgtcgacaacaagccg
cctcagataaccaacactggcttcactatattcgagcggggaacacacataatcaccaga
gctgagctggatactgtggacttagacacggacaggagccagatttccttcacagtcact
cagccccctcagcacggcacggtccagtacaccttcaccgacttgaccaaaggggaccag
ttcaacctgttggacattgctaatgacaggatctcctacatccacaacggagacgagtcc
accagcgatttctttcagctggatgtcagtgatggcgtccatgttgtgaccatcaccatc
agggttaccgtgaagcccatcgatgacgagaccccgaccatcaccctcccggccggaacc
attggctcctacatcgacgtcctggagaacggagctacggagatcacgactaacgtcatc
caggggcgggacgaggacacggacgacctccgtttgaccttcatcctggaggacccaccg
gttctcggtgagatcctggtgaacggggttcaatcagggagcttcacccaggctgacatc
atcaacggactggtggtgtacacccacaccagcggagagatcggcctcaccactaaatac
gactactttaatctgacgctgacagacatgtctgatgagtggacggtagggggcaacagg
gtcacgggggtcagggtacagatcaccatcctccccatggacagccaggctccagaggtg
ttcgtaggcccacagttcactgttgtagagggagagaagaatgtgattgagattcttcac
attagtgctgatgatattgacactcctaatgatgacctgctttgtaccatcatcgtacag
cccacgtcaggctacgtggagaacatctcccctgccccaggctcagagaagtccaggtct
gggactgcgatcagtgcattcaccatcaaggacatcagacagaaccacatctactatgtc
caaagcatccataagggagtggagccggtcgaggacaggttcacgttcagatgctcagat
ggcatcaacttctccgagagacatttcttccccatcgctatcatcccgtccaacgatgag
aagccggagatctatatgagggagtttgtcgttatggaagggatgaatattgttatcgat
acgcccatcctgaacggagccgacgcagacatcccctcggacgaactcacattcatcatc
accaaaccacccaagcacggcttcatcctcaaccagctgaccaccgacaccgtcacagtc
accaacttcaccctggaccagatcagggaagcctccagtatagtgtacgaacatgacgac
tctgagaccaaggaggacagctttgacttaatcctgacggacggtaaatataccgtggag
aagaccatcattgttatgatcatccctgtagatgatgagacacccaggatggccatcaac
gacggtctggagctagagataggagacgttaaagtgatcgataacaatgttttaaaagcc
accgacctggactctgaggatagtactctgacgtacgttgttcgctacgggccgggccag
gggttgttacagaggagaaccccttacgggacgttagagaacatcacagtggggatgaac
ttcacccagtaccaggtggaccaggctctcatcgtctatatccacaacgggcaggaagga
atccgggaccttatcaagtttgacgtgacggacggcatcaaccctctgatcgacaggtac
ttctacgtgacggtgggcggcatcgacatggtgttccctgacgtggtcagtaagggggtc
tctctgaaagaaggaggtagagtaacgttgaccacagacctgctcagcaccagcgacctc
aacagtcccgacgaacacctggtgttcaccatcaccagagccccacagagaggccatctg
gagtgtaccgacggccctggcatgcccatctcctcctttacccagctccagctagctggg
agcaaggtgtactacatccacacggccgatgatgaggtcaagatggacagctttgagttc
gaggtcaccgacggttacaaccctgtgttccgcactttccgtgtctccatcaccgatgtg
gacaataagaaaccggttctaacggttcacagcttggtggttaacgaaggagagaacaaa
ctcatcacgcccttcgagctgaccgcagaggaccgcgacacagctgaccgcctcctgaag
ttcacggtcacccaggtccctgtccacggtcgcctcctcttcaacaacacccgccccgtc
acctccttcaccaaacaggacctgaacgagaacctcatcagctacaaacacgacggtact
gagtcctccaaggattccttctcctttaccgtgactgacgggacgcacaccgacttctac
gtgttcccagacaccgtgttcgagacgcggcgcccccagatgatgaagatcacggtcctg
tcggtggataacggggtgccccagatcgtggtgaataaaggggggcccaccctgagggtg
ttagagacgggtcacctggggttcctcattacctctaagactcttaaggccgaggacagg
gatagtcttcagctgtctgtcacctttaagatcaccgtgggaccagagcatggatacctc
atcaacttgggtacaggcaacgctaccgtcaccacattcactcaagctgaaattgatgac
atgaagatatgctacatactaagagatggtggcaatgctacgagtgacatcttctatttc
tccattgaggacaatggaggcaacaggctgaagaaccaggtgttcaggctgaactgggcc
tgggtctccctggagaaggagtactatgtggtggacgaggaggccaagtacctggaggtg
gtcctcaaacgacgaggatacctgggagagacatcctttgtcagcatcggcaccagagat
ggtacggcggagaaggataaggacttccgtggtaaagcccagaagcaggtccagtttaat
ccaggtcagaccatggccacatggagggtgaggatcttgcaggatggagtgtacgagcag
tctgaggccttccagattgttctgtcagaacctgtcatggctgccctggagttccctgac
acaggcactgtggagatcctcgacccagctgatgagtcgacagtgttcatcccgtctgca
gtctaccctgtagaggaggacattggggagctgctgatcccagtacgcaggagtggtgac
atcacacaggaactcatggtcatctgctacacacagcaagccacagctacagggaccatc
cccactacagtcctgtcctactctgattacatatccagacctgaggaacacaacagtgtc
ctgcgctttgataagggcgagatggagaagtcctgtcgtgtggtgatcatagatgactct
ctgtatgaagaggaggagagcttcaacgttaccctcagtatgcccatgggaggctgtctg
ggacaggagtaccacactgctagggtcaccatcatacctgacctggatgatgctccagga
ttctacttcggagacacagactaccgtgtggatgagagtgatggttatgtggaggtcaag
gtgtataggacaggcactgacctctctaaaacagccacggtcactgtacgctccaggaaa
acagaccctgtctctgctgaagccggtgtggactacgtagggatcagtcgtaacctggac
tttgccccgggggtcagccagcagacgttcagggtgaccatcctggatgacctgggtcag
ccggtgctggaggggaccgagacattcgagctggtcctccgcatgcccatgaacggcatc
ctgggagaaccggggaaggccaccatcctcatcaatgactccgtctccgacctgcccaag
gtgcagttccgtgatgccatgtacatggggcatgagaactccggtcagatctcagtcgtg
gtgtatcgtagtggagacatcagttacaggtcaacggtccgctgttataccagacaggga
accgctcaggttatgatggacttcaacgaacgacccaacacggacgcttccatcatcacc
ttcctaccaggggaggtggagaagccgtgtgttctgtctctggttgatgacacggagcat
gaggaggaggaggagctgaggctggtgttggggtcgccccgcagtgagtctccgttcgga
gcgtccatcgggaaacagaacgagactctggtcaagatcaaggacgacgcagacaaggcc
atcatcaagtttggggagactaagttcagcgtgagtgagcctagcggggcaggccaggtg
tccatggtgaagatcccagtgctgagggtaggagacacctccaaggtctctgtggtccgc
gtccacaccaaggacggatcagccacctccggagaggactaccatcctgtatctgaagac
attgagttcaaggagggtgacacagagcactacatcgaggtggagatcttgtttgatgga
gtcagagagatgagagaagccttcacggtccacctgaaacctgatgagaacatggtggca
gagacgcagatgagtaaggccattatctacatagaggagaccaacagcatggcggacgtc
accttcccctccgtcccccaggtgttctccctactgcagtatgacgacacctccagagcc
agacacacccccccagtggcaggctaccccgtcgtctgtgtcacggcttgtaaccctaag
taccctgactacgacaagactggctccatctgcatcagtgagcacatcaatgacacgctg
acacgctatcgatggttggtcagcgctccaaccagcctggacggggtcaccagctccatg
agagaggtggactttgataccttcttctcctcctccaagatcatcaccttggactctgtc
tatttccaggctggctctagggtgcagtgtgcagctcgtgctgtgaactctaacggagat
gagggcctggaactcagcagcttcatagtctccatcagtatagaggatggtatgtgccag
cctcgtgtggcgggtacagtgggcgctgagcccttctctgccaagctacgctacaccgga
gcagaggacccagacctccccaacctcatcaagatcactgtcaccatgccacacatagac
ggcatgctcccggtggtctccacccgtcctatgtctaactttgagctgacgttgagtcct
gatggtactcgtgtggggaaccaccgctgttctaacctgctggactacaccgaggtcaag
acccgccacggcttcataaccaacgccaccaagaaccctgaggtgatcggggagacctct
ccttaccagtacagcacccccctgaggggatccagcgtactgcgcttctacaagaatctc
aacctagaggcctgtctatgggagttcactagttactatgacatgtctgagctactgtca
gactgtggagggaccatcggtacagacggacaggtgttgaacctggtccagtcctatgtg
accctccgggtgcccctccatgtctcctatgtgttccactccccggttggggcagggggc
tggcagcattttgacctgcaatctgagctacgactcaccttcgtatacgacactgccatc
ttgtggcgggacggcatcggcagccctcctgaggctgagctacaaggagccctgtacccc
accagtatgcgtatcaacgaacagggtcgtctggtggtcaacttcagaacagaggctcga
ttcagaggactatttgtcatatcacactctgcttcctctctgtcgtccatggtgatgtgt
gcggaccaccctggggtgacctttaacctcagcctggtgaggagcgagcccacctacaac
cagcccatgcagcagtggacctttacatcagacttcgctgtgcgtgactactcaggtacc
tacacggtgaagctgctgccctgtacctctcctcccagtctggagtactccctgcctcct
gtctgtaaccccagagaacctgtcacctttgacctggacatacgcttccagcaggtgagt
gacccggttgcggctgagttcagtctgaacacacacatgttgctgctgtctaaaagaact
ttgtggctgtctgacggatccatgggcttcggacaggagagcgacacagccttctcacag
ggtgacatgatatatggcagagtgatggtggacccagtccagaacctgggggattccttt
atctgtaacatagagaaggtgttcctgtgcaccggcgcggatggatacgtgcccaaatac
aaccccaacaacaatgagtacggctgtctggctgatgctccatcgctgctttacagattc
aaaatcattgataaggcccagccagagacacaggccaggtcgtttggtaacgtggggttc
agggctctgctggctgtagacgaccctcgggccctggccctggtcagacagcctggaagt
gacggcttcagcatggactctacagcactattccaggtgtcagcagggagagagtggttc
atccacaccatctacaccgtccgctccagagagaatgctaacaggggcatcgggaagaga
agtctggagtaccacacactcacccaacacagcagtttggctgcaggaggccactccctg
acccaacacagcagcatggacagagaaacacagcatcaaactatggctgcaggaggaccg
tcccagtcccagtttcgctccaggcggtcagcaaacagggtgccagacctgacagaggac
atcggcctggacaacaaccgaggcaccaacattctccatatcgccctggacctcagccgc
cagcgccgcaccagccccgaccgggaggtcctcactcggggtgtggtgcccagggagctg
aaccatcctgaggagagcgaggacagcctggtcctgatcatagggatcctggtgggcctc
ctcctcaccatcctcatcatcatcgtcatagtgatatccgtacggtccagacaggagaag
aagaagatggaggttcccacaacaacgtcaagctctactgagcccatggtgacatcaggg
ttcacttgcggtggcttggacagctcagaagtctga
DBGET
integrated database retrieval system
