Oncorhynchus nerka (sockeye salmon): 115141776
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Entry
115141776 CDS
T07952
Name
(RefSeq) clustered mitochondria protein homolog isoform X1
KO
K03255
protein TIF31
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
one03012
]
115141776
Translation factors [BR:
one03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
115141776
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLU
eIF3_p135
TPR_12
CLU_N
TPR_10
TPR_MalT
TPR_NPHP3
GSKIP_dom
ANAPC3
PGA28-like_dom
Motif
Other DBs
NCBI-GeneID:
115141776
NCBI-ProteinID:
XP_029536820
LinkDB
All DBs
Position
LG14:38618021..38644116
Genome browser
AA seq
1444 aa
AA seq
DB search
MVSKTDDIPASVPNCNVNTVDLVGETPDRKETTKAPHKDPCGHSVDTAVMNGGGTHNLSE
ESKQDGAGDTDGGEDSNEQEVIVIQDTGFTVKIQAPGTEPFDLQVSPQEMVQEIHQVLMD
REDTCHRTCFSLQLDSNVLDNFAELKSIEGLQEGSLLKVVEEPYTVREARIHVRHIRDLL
KGLDPSDAYNGVDCNSLSFLSVFTDGDLGDSGKRKKKGSELEQIDCTPPEHILPGSKERP
LLPLQPQNKDWKPMQCLKVLTMSGWNPPPGNRKMHGDLMYLYMVTVEERHISITASTRGF
YLNQSTTYTFNPKPANPSFLSHSLVELLSQISPAFKKNFTALQKKRVQRHPFERIATPFQ
VYSWTAPQVDHTMDCVRAEDAYTSRLGYEEHIPGQTRDWNEELQTTRELARKNLPDRLLR
ERAIFKVHSDFAAAATRGSMAVIDGNVMAINPGEETRMQMFIWNNIFFSLGFDVRDHYRE
LGGDAAAHAAPTNDLNGVRAYGAVDVEGLYTLGTVVVDYRGYRVTAQSIIPGILEREQEQ
SVIYGSIDFGKTVVSHGKYLELLEKTSRPLKVQRHNVLNEKDESMELCSSVECKGIIGND
GRHYILDLLRTFPPDLNFLPVEGEELSPESVRQGFPRQHRHRLACLRQELIEAFVEHRYL
LFMKMAALQLMQQKANKESKLATLTENSIPGAAVPALPSTETPDASAESSETSTETLTDA
NSDTVQTETTSTTDAPQPAATEATTTEAAPKTEPMTETDSSATTTTNASQATPIEDNVVP
TVTTNGPLVPFATAIQNGECESPLEGKAEDIIPGLAQAKELAESLAAEDGSGIDPKSREV
VLNACKAVGSISNTSFDIRFNPDIFSPGVRFPEDSADDIQKQKQLLKDAGAFMVSCQIPS
LVKDCLDHSALPMDGATLTEALHQRGINVRYLGNVLAFVDQTPAKAQLEHFYRIGISELI
TRCAKHIFKTYLQTMYSVSQGVELSALSAAVSHFLNCFLSSFDAVAHLPADELVSRRKNR
KRRNRVPGGGDNTAWACLTPSELWKNIVSEAQSYYHFTLHCENADQVVEKYGLQKITLLR
EISIKAGIQILIKEYNFDSRHKPAFTEEDILNIFPVVKHVNPKASDAFHFFQSGQAKVQQ
GYLKEGCELINEALNLFNNVYGAMHVEICACLRLLARLNYIMGDHHEALSNQQKAVLMSE
RVLGVEHPNTIQEYMHLALYCFANGQLSTALKLLYRARYLMLMVCGEDHPEMALLDSNIG
LVLHGVMEYDLSLRFLENALAINSKYHGPRSLKVALSHHLVARVYESKAEFRSALQQEKE
GYTIYKNQVGEAHEKTKESSEYLKYLTQQAVALQRTMNEIYKNGSNASIMPLKFTAPSMA
SVLEQLNIINGIIFIPLSQKDLENLKAEVQRRQQLQESGKSVEDLTVDGPLELEDKIPMD
VNVD
NT seq
4335 nt
NT seq
+upstream
nt +downstream
nt
atggtgagcaagactgatgacatcccggcgtcagtacccaactgtaatgttaacacagtt
gatcttgtaggagagacgccagaccgcaaagagactaccaaggcaccacacaaggaccct
tgtgggcacagtgtagacacagcggtgatgaatgggggtgggacccacaatctttcggag
gagtccaagcaggatggggctggtgacacagatggtggggaggattctaacgaacaggaa
gtgattgtgattcaggatacaggtttcactgtgaagatccaggcacccgggacggagcct
tttgacctccaggtttcaccccaggagatggtgcaggagatccaccaggtgttgatggac
cgtgaggacacctgccatcgtacttgtttctccctgcagctggacagcaacgtgctggat
aactttgctgagctgaaatccatcgagggcctgcaggagggctccctgctcaaagtagtg
gaagagccctacacagtgcgcgaggcccgtatccacgtgcgtcacatcagagacctgctg
aaaggcctggacccgtctgatgcctacaacggcgtggactgcaactccctctccttcctc
agcgtcttcactgacggggacctgggagacagtggtaagcggaagaagaagggcagtgag
ctggagcagatagactgtacccctccagaacacatcctgcctggcagtaaagaacgcccc
ctgctgcctctccagccacagaacaaggactggaagcccatgcagtgcctgaaggtcctg
actatgagtggctggaacccccctcctggcaacaggaagatgcatggtgatctcatgtac
ctgtatatggtgactgttgaggagagacacatcagtatcaccgcctctacacgtggcttc
tacctcaaccagtcgaccacctacaccttcaaccccaagccagctaaccccagcttcctc
agccactcgttggttgagctgctgagccagataagccctgccttcaagaagaacttcact
gccctgcagaagaaaagggttcagcggcatccgtttgagaggatagccacacccttccag
gtgtacagttggaccgccccccaggtggaccacaccatggactgtgtcagagctgaggac
gcttacacctcccgtctgggctacgaggaacacatacctggacagacacgagactggaat
gaggagctgcagacgaccagagagctggcccggaagaacctgcctgatcgcctgctgaga
gagagggccatcttcaaggtccacagtgactttgcggctgctgccactcgcggttccatg
gcggtgattgacggcaacgtgatggccatcaaccctggcgaggagacacgtatgcagatg
tttatctggaacaacatcttcttctccctgggctttgacgtacgtgaccactaccgcgag
ctgggcggggatgctgccgcgcacgctgcgcccaccaacgacctcaacggtgtccgggct
tacggggccgtagacgtggaggggctgtacaccctggggactgtggtggtggactatcgg
ggttaccgtgtcacggcccagtcgatcatccctggcattctggagagagagcaggagcag
agcgttatctacgggtctatcgactttgggaagacagtggtgtctcacgggaagtacctg
gagcttctggagaagaccagtcgaccactcaaggtccagagacacaatgtactgaatgag
aaggatgagtccatggagctgtgttcctctgttgagtgtaagggcataatcggcaacgat
ggacgccactacatcttggaccttctgaggaccttcccccccgacctgaacttcctgcct
gtggaaggggaggagctttcccctgagagtgtgagacagggtttcccacgccagcaccgc
caccgtctggcctgcctccgtcaggagctcatcgaggccttcgttgagcacagatacctc
ctcttcatgaagatggcagcgcttcagcttatgcagcagaaagccaacaaggagagcaag
ctggccaccctgacagagaatagcatccccggggcagccgttccagccctgccctccaca
gagacccccgatgcctcggccgagtcctcagaaacttccacagaaaccctcactgacgcc
aactcagacacagtccagacggagaccacctccaccactgatgcccctcagccagcagca
acagaagccaccaccacagaagcagcccccaagacagagccaatgacagaaacagacagt
tcagctacaacaaccactaatgcctcccaggcaacccctatagaggataatgtggttccc
acggtgaccaccaatgggccgttggtgccctttgccacagcaattcagaacggggagtgc
gagagccctctggagggtaaggctgaggatattatccctggcttagcccaggcaaaagag
ctggctgagtctttagccgcggaagacggatccggcatcgaccctaaaagccgagaggtg
gtcctcaacgcctgcaaggccgtgggttccatcagcaacacctccttcgacatccgcttc
aatccagacatcttctctccaggagtgcgtttccctgaggacagtgcggatgacattcag
aaacagaaacagctgttgaaggatgctggagccttcatggtgtcctgtcagattccgtct
ctggtaaaagactgtctggaccacagtgctctgcccatggatggagccacgctgaccgag
gcgctgcaccagaggggcatcaacgtgcgttacctaggcaacgtactggcgttcgtggac
cagaccccagccaaggcacagctggagcacttctatagaataggtatcagcgagttaatc
accagatgtgcgaaacatatcttcaagacatacctccagactatgtactccgtctcccag
ggtgttgagttgtcggccctctccgccgctgtcagccacttcctcaactgcttcctgtcc
tctttcgatgccgtggcacacttgcctgccgacgagctcgtgtcgcgccgcaagaaccgt
aagcgccgtaaccgcgtcccggggggaggggacaacactgcgtgggcctgcctgacaccc
agcgagctgtggaagaacatagtctctgaggcccagagctactaccacttcaccctgcac
tgcgagaatgccgaccaggtagtggagaaatacggccttcagaagatcaccctgctcaga
gaaatctccatcaaagctggcatccagatcctgataaaggagtataactttgacagtcgc
cacaagcctgccttcacagaggaggacatccttaacatcttccctgtggtgaagcacgtc
aaccccaaggcctccgatgccttccacttcttccagagtggacaggccaaggtccagcaa
ggttacctgaaggagggctgtgagttgatcaacgaggctctgaacctgttcaacaacgtg
tacggggccatgcacgtagagatctgtgcctgcctgcgtctgctggctcgcctcaactac
atcatgggagaccaccatgaggccctcagtaaccaacagaaggctgtcttgatgagtgag
agggtactgggcgtcgagcaccccaacactatccaggaatatatgcacttggctctgtac
tgctttgccaacggtcagctgtccactgctctgaagctgctgtaccgtgctcgctacctc
atgcttatggtgtgtggggaggaccaccccgaaatggcgcttctagatagtaacattggc
ctggtgctgcatggagtaatggagtacgacctgtctctgaggttcctggagaacgccttg
gccatcaactccaaataccatggaccccgctccctcaaagtagccctcagtcatcatctg
gttgcgagggtttacgagagcaaggcagagttccgctctgcgctccagcaggaaaaagag
ggctacaccatctacaaaaaccaggtgggagaggcccacgagaagactaaagagagctct
gagtatctgaagtacctcacacagcaggctgtggctctgcagagaaccatgaacgagatc
tacaagaacggctccaacgccagcatcatgccactcaagttcacagctcccagtatggcc
agtgttctagagcagctcaatatcatcaacggcatcatctttatacccctcagccaaaag
gacttggagaacctgaaggcagaggttcagcggcggcagcagcttcaggagtcggggaag
agcgtggaggatctcactgtggacggtccactagagctggaggataaaatacccatggac
gttaacgttgattaa
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