Oncorhynchus nerka (sockeye salmon): 115141811
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Entry
115141811 CDS
T07952
Name
(RefSeq) nectin-3-like protein
KO
K06592
poliovirus receptor-related protein 3
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04514
Cell adhesion molecules
one04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
115141811
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
115141811
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
one04515
]
115141811
04090 CD molecules [BR:
one04090
]
115141811
Cell adhesion molecules [BR:
one04515
]
Immunoglobulin superfamily
Nectin family
115141811
CD molecules [BR:
one04090
]
Proteins
115141811
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
C2-set_2
V-set
ig
Ig_2
I-set
C1-set
Motif
Other DBs
NCBI-GeneID:
115141811
NCBI-ProteinID:
XP_029536892
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All DBs
Position
LG14:complement(39724845..39801730)
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AA seq
557 aa
AA seq
DB search
MVKRLLLDYHKTLPPNGLQAATVLLLIYGFTCVSSNAVLVPERVSAVLGKNITLGCRVEV
GTNLSLTQSSWERRLPSGTITLAVFNPQFGISISPDYTRRLSFMNPSVHDATIVLEGVGF
QDIGSYTCKVATFPLGNTQASITVNILVEPKVYVSAGSMALVDGGNESVAATCIAERGRP
AAEVSWETELFGRSEVQTQDEPNGTYSTQVHYVLEPRRHSQGHTLTCVVRHPALQTEFRI
PYVLDVQFAPEVTVVGYDQNWFVGQENVKLDCGAKANPPAHHFSWTRLDGPMPDGVDIVN
NTFSFTRPLERNDSGLYRCEVYNDIGPRSHDVHVWIQDPPPTTAPVPTTSTPLFLDTSDT
SMAPNKRRGASGHFTSPTLASLSDSSLGTIVGGAVGGVLLLGLLLILGGACFMRQRRTFR
GDYYTKQYLGPSDMQKESQLDVLQPHELQEVYGDRHNSTCKDSQELKPKPGLGGDIIYPN
DIKDKEDWGDGHRGLREGNYPVENHNNIHHPKGPLVHTPTVTNGSPYLPEDCYDNGTDSE
YVSHMDGSVISRREWYV
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaaagattgctgctcgattaccacaagactctgccgcccaatggactgcaagcc
gccacagttttgcttctcatttatgggtttacctgtgtgagtagtaatgcggtgctggtc
ccagagagggtgagtgctgtgctggggaagaacattactctgggctgcagggtggaggtg
ggcaccaacctcagcctcacccagagctcctgggagcgtcgcctgccctcaggcaccatc
accctggccgtcttcaacccccagtttggcatctccatctccccagactacaccaggcgc
ctgtccttcatgaacccctccgtgcacgatgccaccatcgtcctggaaggcgtgggtttt
caggacattgggtcttacacgtgtaaagtggcgactttcccgttgggaaacacgcaggca
tccatcaccgtcaatatactcgtggagcccaaggtttacgtctctgccggctcaatggcc
ctggtggatggtggtaatgagtcggtggcagccacctgcatagcggagcgcggccggcct
gcagccgaggtgtcctgggagactgagctgtttggccgctctgaggtccagacgcaggac
gagcccaacggcacctattccacccaggtgcactatgtgttggagccacggagacactcc
cagggccacaccctcacctgtgtggtgcgccacccggccctgcagactgagttcaggata
ccctacgtgctcgatgtgcagtttgctcctgaggtgacggtggtgggatatgatcagaac
tggtttgttggtcaggagaatgtgaagctggactgtggagccaaagcaaacccacctgcc
caccacttctcctggaccaggttggatgggccgatgcctgatggtgtggatatagtgaac
aacacttttagtttcactcgtcctctggagagaaatgactctggactgtacaggtgtgag
gtgtacaacgacatcggtccacgcagtcatgacgttcacgtctggatacaagatcctccc
cccaccacggcaccagtccctaccacctctactcccctcttcctggacaccagtgacacc
agcatggcccccaacaagcggcgaggagcgagcggccacttcacatcccccaccctggcc
tccctgtcagacagcagcctgggtaccattgtgggcggggctgtgggcggggtcctgctc
ctggggttgctgctgatcctgggcggagcttgcttcatgcgccagcggaggaccttcagg
ggggactactacaccaaacagtacctgggcccctccgacatgcagaaggagtcccagctg
gacgtgctccagccccacgagctgcaggaggtctacggggacaggcacaactctacctgc
aaggacagccaggagctgaaacccaagccaggactgggaggggacataatttatcccaat
gacatcaaggacaaggaggactggggcgacggccacaggggcctccgggagggcaactac
cctgttgaaaaccacaacaacatccaccaccccaaagggccgctcgttcacactcccact
gtgaccaacggctccccctacctgccggaggactgctatgacaacggcacagacagcgag
tatgtgtcccacatggatgggtctgtgatctcacgcagagagtggtatgtctga
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