Oncorhynchus nerka (sockeye salmon): 115141841
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Entry
115141841 CDS
T07952
Name
(RefSeq) RNA polymerase II-associated factor 1 homolog
KO
K15174
RNA polymerase II-associated factor 1
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
one03021
]
115141841
Transcription machinery [BR:
one03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
115141841
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Paf1
Motif
Other DBs
NCBI-GeneID:
115141841
NCBI-ProteinID:
XP_029536953
LinkDB
All DBs
Position
LG14:40969829..40974960
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AA seq
532 aa
AA seq
DB search
MAPTIQTQAQRDSDGHRSSSHRTVPERSGVVCRVKYCNSLPDIPFDPKFITYPFDQHRFV
QYKATSLEKQHKHELLTEPDLGVTIDLINPDTYRVDPSILLDPADEKLLEEDITAPSSSK
RSQQHAKVVPWMRKTEYISTEFNRYGVSNEKVEVKIGVSVKQQFTEEEIYKDRDSQIAAI
EKTFEDAQKPIAQHYSKPRVTPVEVMPVFPDFKMWINPCAQVIFDSDPAPKDMSAPQGVE
MMSQAMIRGMMDEEGNQFVAYFLPNEETIRKRKRDVDEELDYMPDDLYDYKIAREYNWNV
KNKASKGYEENYFFIFRDGDGVYYNELETRVRLSKRRAKAGAQSTTNAVLVCKHRDMNDK
ELEAQDARKAQLENHEPEDEEEDMDLGKLQDSGDEKGSESEGDNSDSDSDREDEDGKRSG
AEDDEEGVKRRRKASGSGSESGEEEVKLADEVEIFGSDDDSDDDDNEPKNGAARSSGEER
SGSEEEKRSHRERSRSVSPAHSSGSDHSEGGRAQSGSGSEQASDSSDGSDSE
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atggctccaactatccagacacaagcacagcgagactcagacggtcacaggagttcatca
cacagaactgttccagagaggtctggagtggtctgtcgggtaaagtactgcaacagcctg
cctgacatcccatttgatcccaaattcatcacatatccatttgaccagcacaggtttgtg
cagtacaaggctacgtcgttagagaagcaacacaaacacgaactgcttactgagcctgac
cttggcgtcaccatcgacctcattaacccagacacctaccgcgtcgaccccagcattctt
cttgatccagctgatgagaagttattggaggaagacatcacagctccatccagctcgaaa
agatctcagcagcacgccaaggtggtcccgtggatgagaaagactgagtacatctctaca
gagttcaacagatatggtgtctccaatgagaaagtggaagtcaagatcggtgtgtctgtc
aaacagcagttcacagaggaggagatatacaaggatagggacagccagattgctgcaatt
gaaaagacctttgaggatgcacagaaaccgattgcccagcactacagtaaacccagagtc
actcctgtggaggtgatgcctgtgttccctgacttcaagatgtggatcaacccgtgtgct
caggtaatcttcgactctgatcctgctcctaaagacatgtcagcaccccagggtgtggag
atgatgtcacaggccatgattagaggtatgatggatgaggaaggaaaccagtttgtggcc
tacttcctgcccaatgaggaaacgattcgcaagcgcaagagagacgtggatgaggagctg
gactacatgcctgatgatctgtatgactataagatagccagggagtacaactggaatgtg
aagaataaagccagcaagggctacgaggagaactacttctttatcttcagagatggagat
ggagtctactacaacgagctggagaccagagtacggctgagtaagaggagagctaaggct
ggagcccagtctactacaaacgctgtgctggtgtgtaagcacagagacatgaatgacaag
gagctggaagcacaggatgcgcgtaaggctcagctggagaaccatgaaccagaggacgaa
gaagaggacatggacttgggtaaactgcaggactctggtgatgagaagggcagcgagagc
gagggagacaactctgacagtgactctgacagggaggatgaggatggaaagcggagtgga
gctgaggatgatgaagagggagtgaagcggaggaggaaggccagtggtagcggcagtgag
agtggcgaggaggaggtcaagctggcggatgaggtggagatcttcggtagcgacgacgac
agtgatgacgacgacaacgagcccaagaatggagcagcccggagcagtggggaggagagg
agtgggagcgaggaggagaagaggagccatagggagaggagtaggagcgtgtctccggcc
cacagtagcggtagtgaccactcagagggtggccgtgcccagagcgggagtggcagtgag
caggcctccgactccagcgacggcagtgacagtgaataa
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