Oncorhynchus nerka (sockeye salmon): 115141843
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Entry
115141843 CDS
T07952
Name
(RefSeq) protein Smaug homolog 2-like isoform X1
KO
K27396
protein Smaug
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
one03019
]
115141843
Messenger RNA biogenesis [BR:
one03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
115141843
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHAT
SAM_1
SAM_2
Motif
Other DBs
NCBI-GeneID:
115141843
NCBI-ProteinID:
XP_029536955
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All DBs
Position
LG14:40981463..40997888
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AA seq
681 aa
AA seq
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MMFRDQVGILTDWFKGWNECEQTVALLSLLKRASRTQARFLHICLEHWLADCTEIHILEA
EANNADIVSQWHQEPMEKAVSLLLSHLPLLQPRNSEAKCEYMKLLQKVLSYTIESSLFVE
ESRQLLSYALIHPATTLDDRTSLAMWLNHLEEHLSSGYPGPSSRPPSGPYHPRQGSDEWP
GSAEGLDPGHGWLDKPPSSSSPAGQNGHMSFQGGMSSPINSNNAGMGQMGQPSPLKRSLS
LIPSSPQVCGADWLSQDDLGGRQAFDHAPLSPQSSVASSGSEQTEDQGSRNTFQEDGSGM
KDVPMWLKSLRLHKYAALFSQMTYEEMMILTEHHLESQVCHRLSQNVTKGARHKIALSVQ
KLRERPSVLKSLEKDILEGGNLRNALQELQQIIITPIKVYSYSPPSVSHRDMEGTGSPSD
HSNPGEDKDLAQEGFQPHNPPPCDGESSATPISDRDIAGQFTRVMGKVCTQLLVSRPDEE
NISCYLQLIEKCLTHEAFTETQRKRLVSWKQQVLKLLRLFPRKAMLDMPVYRQKGWAYGS
NSLPTAGSVSAGGLARRGQRSFQLPPRGLTAGRMGLLSPGGIGVASPRHTLTSPTLPGQG
RQNLWFANPGGSNSMPSQSRSSVQRTHSLPVHTSPQTMLLFQQQECQVPGADLEINPTLE
SLCLSMTEHALGDGMDRTSTI
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgatgttccgagaccaggtgggcatcctgacggactggttcaaaggctggaacgagtgt
gagcagacggtggcgcttctttccttgctgaagagagcgtctcgtactcaggcccgcttc
ctgcacatctgcctggagcactggctggcagactgcactgagatccacatcctggaggct
gaggccaacaatgcagacattgtgagccagtggcaccaggagcccatggagaaggcagtg
tccctgctgctgtcccacctacccctgctgcagccccgcaacagcgaggccaagtgtgag
tacatgaagctgctgcagaaggtgctgagctataccatcgagagtagcctgtttgtggag
gagagcagacagctgctgtcctacgcccttatccacccggccaccaccctggacgaccgc
acctcgctggccatgtggctcaaccacttggaggagcacctctccagcggctacccaggg
ccctcctcccggcccccctccggcccctaccacccccgtcagggttcagatgagtggccg
ggctccgcggagggcctggaccctggccacggctggctggacaagcccccctccagctcc
tcccctgcagggcagaatggacacatgtctttccagggcgggatgtcctcgcccatcaac
agcaacaatgcaggcatgggtcagatgggccagcccagtcctctgaagaggtccttgtcc
ctgatcccctccagtccccaggtctgtggcgcagattggctgagccaggatgacctgggg
gggcgacaggcctttgaccacgcccccctgtccccccagagtagtgtggcatcctcaggc
agcgagcagactgaggaccagggctccagaaacaccttccaggaggacggcagtggcatg
aaagatgtgcccatgtggctgaagagcctccgtcttcataagtacgcagcacttttctcc
cagatgacttatgaggagatgatgattctgacagagcaccacctggagtcacaggtttgt
catcgtttgtcacagaatgtgaccaaaggtgcgcggcacaagatagccctgagtgtccag
aagctacgggagaggccaagcgttctcaagtctttagagaaggatatattggaggggggc
aacctgcgtaacgccctacaggagctacagcagattatcatcacccccatcaaggtctac
agctacagccctcccagtgtttcccacagagatatggaggggactggatccccctcagac
cactccaaccctggggaggacaaggacctggcccaggagggcttccagccccacaacccc
cctccctgcgacggggagtcctcagccacacccatctcagaccgcgacattgctggccag
ttcacacgtgtcatgggtaaagtgtgcactcaactactggtttccaggccggacgaggag
aatatcagctgttacctgcagctcattgagaaatgtctgacacatgaggctttcacagag
actcagaggaagagactggtctcctggaagcagcaggttctcaaactgctccgcctgttc
ccaagaaaagccatgctggacatgcctgtgtaccgacagaaaggctgggcatatggttcc
aattccctccccacagcaggctctgtgagtgctgggggtctggcacgtagggggcagagg
tcattccagttgccccctcgtggcctcactgccgggcgcatgggtctcctgagtccaggt
ggcatcggggttgcctcccctcgccacaccctcaccagccccacactgccaggccagggc
agacagaacctgtggtttgccaaccctggaggcagcaacagcatgccaagccagagtcgc
agctccgtgcaacggacccactcactccctgtccacacctccccgcaaaccatgctcctg
ttccagcagcaagaatgccaagttccaggtgcagacctggagatcaaccccaccctggag
tcactgtgcctcagtatgacagagcatgccttaggggatggaatggaccgaacatcaaca
atatga
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