Oncorhynchus nerka (sockeye salmon): 115141882
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Entry
115141882 CDS
T07952
Name
(RefSeq) Down syndrome cell adhesion molecule homolog
KO
K06767
Down syndrome cell adhesion molecule
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
one04515
]
115141882
Cell adhesion molecules [BR:
one04515
]
Immunoglobulin superfamily
DSCAM family
115141882
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
fn3
Ig_2
ig
Ig_DSCAM-DSCAML_C
V-set
C2-set_2
Ig_5
Pur_ac_phosph_N
C1-set
V-set_CD47
C2-set_3
Interfer-bind
fn3_2
ARM_TT21_4th
DUF4446
Motif
Other DBs
NCBI-GeneID:
115141882
NCBI-ProteinID:
XP_029537072
LinkDB
All DBs
Position
LG14:42684210..42725981
Genome browser
AA seq
1911 aa
AA seq
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MPWIMRDRVSFPAGWRTTVASYELIGSCHFYVNNPSFLSLSFSLPGPRFLITTTGALYIL
DVQNEDGLYNYRCTTRHRYTGETRQSNSARLFVSDPTNSEPGILDGFDRREVMASHRVEL
PCKASGHPMPKYRWLKDNSPLEPDTRFRQSVTGLLIESAQPTDSGTYVCEVWNSYGNAEV
VGRLMVKQPLKAVVSPRKVKGSVGSKVSLHCSVSGSDQYELSWYRNGEIIYPGNNVRITG
ISRENLIMEGMAKSDGGAYQCFARKNKMSAQDFVQVILEDGTPKILSSFSEKVVNPNEPV
FLVCNVKGTPPPSCTWNLDDDPVIKDSHHHPGHYETHEGHVVSQLNITHTKEVDGGVYRC
TCRNSAGAVYHQARINVRGAASIRPMKNITAIAGRDAYVHCRVIGYPYYSIKWYKNSHLL
PFNHRQRAFENNGTLKLSNVQELDQGEYNCRVLVKPHQETNQSVHLNVKVPPYIQPFAFQ
RFSIGQRVFIPCVVMSGDQPLDITWQKDGRPIPASLGVTIDNIEFTSSLRISNLSPDHNG
NYTCIARNEAAAVEHQSQLIVRVPPQFVVQPTDQDGIYGKTVTLNCSAEGYPRPTLVWKH
SKGNGVPQFQPIALNSGSRIQLLVNGSLLIKHVLEEDSGYYLCKVSNDVGADVSKSMYLT
IKIPAMITSYPNTTMATVGQQKEMSCTAHGEKPIMVRWEKEERIINPETSRYTVVVKEVA
DEVISTLKILPTVREDSGFFSCHAINSYGEDRGIIQLTVQEPPDPPEVEIREVRDRTIAL
RWTMGFDGNSPITGYDIECKNKSASWNSAQITKDVSPQLNQATIIELHPSSTYNIRIFAK
NNIGKSDTSNELTITTDEAAPDGPPQEVQLEATSPQSIKVTWRAPNKHLQNGVIRGYQVG
YREYSSGGSFQFNIISMDTTGESSESITLDNLRKFTEYGVVVQAANRAGTGPSSQEVITK
TLEDVPSRPPENVLAMAKSPEVISLSWLTLPNEALNGNLQGYRVIYWANLPDGELGEIRN
VTTSYPSLELDGLEKYTNYSIQVLAFTRAGDGVRNEQIFTRTKEDVPGPPAGVKSAAATS
SVVFVSWLPPLKLNGIIRKYIVFCSNLHPTVMSEFEASPDVYFYRVPNLARNRKYSIWVV
AVTAAGRGNSSETITVEPRAKAPARILTFNGTVTTPWMKDIILPCKAVGDPPPTIKWLKG
NNGTPAPVLIDGRRSVHSNGSFIIRTVKAEDSGNYSCVASNNWGSDEITLNLQVQVPPDQ
PRLTVTKTTTTSITLSWIPGDNGGSSIRGYILQYSEDNSEQWGSFPISPSERSYRLENLK
CGTWYKFTLTAQNGVGPGRISEIIEAKTHGKEPQFAKEHELFASINSTRVRLNLIGWNNG
GCPITSFTLEYRPVDTAMWTMAQRTSLTKSYILYDLAEATWYELQMKVVNSAGFAEKKIT
FATLNADGSTIPPLLKTVDPITDNMSGNEGLKMMVTITCILVAAVMVFILLMVLKRRRRE
QRLKRLRDAKSLAEMLMSKNTRTPDTSNKQQAMRMHIDIPRAQLLIEERDTMETIDDRST
VLLTDNDFGETSKQKSSTVTHTVHYQSLSQATGPLVDVSDARPGTNPTARRTAKAGPAAS
RNRYASQWTLNPPQPPTSSHTLSTDWRLPTPRAAGSVDKESDSYSVSPSQDTDRARSSMV
STESASSTYEELARAYEHAKMEEHLRHAKFTITECFISDTSSEQMTAGTNDYTDSLTSST
PSESGICRFTASPPKPQDVSRVMNMAAPKAHRPGGELVHLPPYLRMDFLLNRGSASGGRG
SNGGNGGREGGGGETGALGQACLEPQKSRTLKRPPLLEPTPMEVPTSREVQQWQPGTAST
LPQREPTGREATGDLAQAPAAKLSSSQESLLDSRGHLKQSNNPYAKSYTLV
NT seq
5736 nt
NT seq
+upstream
nt +downstream
nt
atgccatggattatgcgggaccgggtgtcttttccagctggatggcgtactacagtagct
tcctatgagctgattggctcctgtcatttttacgtgaataatccctcctttctttctctc
tctttttctcttccaggacctagatttctcatcacaaccacaggagccttgtatattctg
gacgtccagaatgaggatggattgtataactaccgttgcaccacacggcatcgctacacg
ggcgagaccaggcaaagcaacagcgcccggctttttgtgtcagatcccaccaactcagag
ccggggattttggatggctttgaccgtcgggaggtcatggcgtcccatcgggtggaactg
ccctgtaaggcgtcgggccatcccatgcccaagtaccgctggctgaaggacaacagcccc
ctggagcccgacacacgtttccgccagagtgtcacgggcctgctgatagagagcgcccag
cccaccgactctggcacctacgtgtgtgaagtgtggaacagctatggcaacgctgaggtt
gtgggccggcttatggtcaagcagcctctgaaggcggtggtcagcccacgaaaggtgaag
ggcagcgtgggtagtaaggtgtccttgcattgcagtgtcagtggctctgatcagtatgag
ctgtcgtggtatcgtaacggagagatcatctaccctggcaacaacgtgcggatcacaggc
atcagcagggagaacctgatcatggagggcatggccaagagcgatggcggggcctatcaa
tgtttcgccaggaagaacaaaatgtctgctcaggattttgttcaggtcattttggaggac
ggcactccgaagattctgtcctccttcagtgagaaggtggtcaaccccaacgagccggtc
ttcttggtgtgtaacgtcaaaggcactccccctccctcctgcacctggaacctggacgac
gacccggtcatcaaggacagtcaccaccaccctggccactacgagacccacgagggccac
gtggtcagccagctgaacatcacccacaccaaggaggtggacggaggggtgtaccgctgc
acctgcaggaactcggccggggcggtctaccaccaggctcgaataaacgtaagaggggct
gccagcatccgtccaatgaaaaacatcacagccatcgcagggcgggacgcgtacgtccac
tgtcgcgtcattggctacccatactattccatcaagtggtataagaactcccacctgctc
ccctttaaccaccggcagcgggccttcgagaacaacggcactctgaagctgtccaacgtg
caggagctggaccagggagagtacaactgcagggtattggtcaaacctcatcaagagacc
aatcagagcgtccatctcaatgtcaaagttccaccgtacatccagccctttgcattccag
cggttctccattggtcaacgcgtcttcatcccctgcgtggtaatgtcaggtgaccagccc
ctggacatcacctggcagaaggacgggcggccaatccctgccagtctgggggttaccatc
gacaacatagagttcaccagctcactgcggatctccaacctgtccccagaccacaacgga
aactacacctgcattgcacgcaacgaggctgcagccgttgagcaccagagtcagctcatt
gtcagggttcctccccagtttgtggtgcagccaacagaccaggatgggatctatggcaaa
actgtgaccctcaactgctctgctgagggttatccacgccccaccctcgtatggaaacac
tccaaaggtaacggggttccccagttccagcctatcgccctgaactctggctcccgtatc
cagctgctggtcaacggctctctgctcatcaaacacgtgctggaggaggacagcggctac
tacctgtgtaaggtcagcaacgacgtgggagctgacgtcagcaaatccatgtacctcacc
atcaaaattccggccatgatcacgtcgtaccccaacaccaccatggccacggtgggccag
cagaaagagatgagctgcacggcccatggggagaagcccatcatggtgcgatgggaaaag
gaggaacgcatcatcaacccagagaccagccgctacaccgtcgtggtcaaagaagtggct
gacgaggtcatctccactctgaagattttgccgactgttcgggaagattctggattcttc
tcctgccatgccatcaactcctatggtgaagacagagggatcattcagttaacagtacaa
gaacctccggaccctcccgaggtggagatccgagaggtcagagaccggaccattgccctc
cgctggaccatgggctttgacggaaacagccccatcacaggatatgacattgagtgcaag
aacaagtcagcctcgtggaattcagcccagataaccaaagatgtgtccccccagctgaac
caggccaccattatagagctgcacccctcctccacctacaacatccgcatattcgccaag
aacaacatcggcaagagcgacaccagcaacgagctcaccatcaccactgacgaagcagcc
cccgatggccctccacaggaagtacaactggaggccacctctccacaaagcatcaaagtc
acctggagggcccccaacaagcaccttcagaatggggtgatccggggctaccaggtgggt
tacagagagtacagctctggaggcagcttccagtttaacatcatcagcatggacaccaca
ggggagagcagcgagagcatcaccctggacaacctgaggaagttcactgagtatggggtg
gtggtgcaggcagctaaccgtgctggcaccggcccctcctctcaggaggtcatcaccaaa
acactggaggatgtcccctcgcgtccccctgagaatgtcctggccatggccaagtcccca
gaagtaatctctctgtcctggttgaccctgcccaacgaggccctcaatggaaacctgcag
ggctacagagtcatctactgggccaacctgccagacggagagttgggagagatcaggaac
gtgaccacctcctacccgtctctggaactggatggtctggagaaatacaccaactacagc
atccaggttctggccttcacccgggccggggacggggtgcgcaatgagcagatcttcacc
cggaccaaggaagatgtccctgggcctccagcgggggttaagagtgcagccgccaccagc
tccgtggtgtttgtgtcctggctccctcctctcaaactcaacggcatcatcaggaagtac
attgtcttctgttccaacctgcaccccacggtgatgagtgagtttgaggcttctcctgat
gtgtatttctacagagtgccaaacctggcccgcaacaggaagtacagcatctgggtggtt
gccgtgacagccgctgggcgaggcaacagcagtgagaccatcacagtggaacctcgggcc
aaagctcctgccaggatcctgacgttcaacggaacagtgactacaccctggatgaaggac
atcattctgccctgcaaggcggtcggagatccaccccccactatcaagtggctgaaggga
aacaatggtacacctgcccctgttctgattgatggacgccgcagtgtccatagcaacggt
agcttcatcatccgaacggtgaaagcagaggactctgggaactacagctgtgtggccagc
aacaactggggctctgatgagatcacgctcaacctgcaggttcaagttcctccagaccaa
ccacgcctcacagttaccaagacaaccaccacatcaatcactctgtcctggatacctggg
gacaacggaggaagctccatcagaggctacatcctgcagtactcagaggacaacagtgag
cagtggggcagctttcccatcagccctagcgagcgctcgtaccgtctggagaacctgaag
tgtggcacttggtacaagttcaccctgactgctcagaatggagtgggccccggacgcatc
agtgagatcattgaagcaaaaacgcacggaaaagagccccagtttgccaaagaacacgag
ctgtttgccagcatcaattccacccgggtcaggctcaatctaattgggtggaacaatggc
ggctgcccaatcacctcattcaccctggagtaccgtccggtcgacacggcaatgtggacc
atggcccagcgaacctcactaaccaagagctacatcctgtacgacctggcggaagccacc
tggtacgagctgcagatgaaggtggtcaacagcgctggcttcgccgagaagaaaatcaca
ttcgccacgctcaacgccgatggaagtactatccctcctctgttgaagacagtggacccc
atcacagacaacatgtcaggcaacgaggggctgaagatgatggtgaccatcacctgtatc
ctggtggctgctgtcatggtcttcatcctcctgatggtgctgaagaggaggaggagggag
cagaggctcaagaggctacgcgatgcaaaaagcctggcagaaatgctgatgagtaaaaac
acacggacaccagacacatcgaacaagcagcaagccatgagaatgcacatcgacatcccc
cgagcccagctgctcatcgaagagagagatactatggagactatcgacgacaggtcgacg
gtgctgctgactgataatgactttggggagacgtccaaacagaagtcgtccactgtcacg
cacacagtccactaccagtccctgtcgcaggccaccggcccactggtggacgtctccgat
gcccggcctggaaccaaccccacagcacgccgcactgccaaagcaggccctgcagccagc
aggaaccgatacgccagccagtggaccctgaaccccccccaaccacccacctcctcccac
accctgagcacagactggagactgcccacaccgcgtgccgccggctctgtggacaaggag
agcgatagctacagcgtcagcccatcgcaggacacagaccgcgcgcggagcagcatggtg
tcgacagagagcgcgtcgtccacgtacgaggagctggcccgagcctacgagcacgccaag
atggaggagcacctgcggcacgccaagttcaccatcacagaatgcttcatctccgacacc
tcctcagagcaaatgactgccggcaccaatgactacacagacagcctgacgtccagcacg
ccgtccgagtcaggcatctgcaggttcaccgcctccccgcccaagcctcaggacgtcagc
cgggttatgaacatggcagcacccaaggcccacagaccgggaggagagctggtgcacctg
cccccgtacctacgaatggacttcctgttaaaccgtggctctgcatcgggaggccggggg
tccaatggtggtaacggaggaagagaaggaggaggaggggagacaggggcgttgggtcag
gcgtgtttggagccccagaagagccgcacactgaaacggcccccgctcctggaacccaca
cccatggaggtgcccacatccagagaggtgcagcagtggcagccagggactgcctccacc
ctgccccagcgtgagcccactggccgtgaggccaccggagacctggcccaggccccggct
gccaagctcagcagctcacaggagtccctgctagactccagaggacacttaaaacagagc
aacaacccctacgcaaagtcctacacactggtataa
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