Oncorhynchus nerka (sockeye salmon): 115141923
Help
Entry
115141923 CDS
T07952
Name
(RefSeq) tsukushin-like isoform X1
KO
K08130
tsukushi
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
one00535
]
115141923
Proteoglycans [BR:
one00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class IV
115141923
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRR_5
LRR_14
LRR_LRWD1
LRR_RPS2
LRR_EndoS
LRRNT
PDU_like
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
115141923
NCBI-ProteinID:
XP_029537179
LinkDB
All DBs
Position
LG14:complement(45236557..45262493)
Genome browser
AA seq
356 aa
AA seq
DB search
MVKSMMAFLLCVSLWMLLAVHGQAGAVKNCHPGCHCEVESFGLFDSFSLTRVDCRGVGPS
TNPISIPLDTAHLDLSSNSMSLLTDTMLSGPGYTTLVSLDLSNNLISMVSPKALSRLRYL
ESLDLSHNSLEGLDEGCFSGLPLAEVDLSHNHFREFDLNMFITKDHGEPISVDLSHNRLT
VVSWSSSRSPLLHVQSLTLAANQLRAVPKLKGILLRDLNLDGNSISRIEEGAFEDLKDLV
YLSLSGLPELFNIQPNCFRGLQNLQVLDLSNNAKLKTLSPAVFSGLVSLQELNLSNSGVT
SLPNNMLSHLPIIKSITLGQNIHCWRAQKQGQFHRQLGQEQKHDEMLTCDVEGVIS
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atggtcaagagcatgatggcgtttctcctgtgtgttagcctgtggatgctcctagctgtc
catggccaagctggagcagtgaagaactgccacccgggttgccactgtgaggtggagagc
ttcggcctgttcgacagcttcagcctgaccagggtggactgcaggggagtgggccctagc
accaaccccatctccatccccctggacactgcccacctggacctctcctccaactctatg
tccctgctgactgacaccatgctctctgggcctggctataccaccttggtcagcctggac
ctcagcaacaacctcatctccatggtcagccctaaggccctgtccaggctgcgctacctg
gagtctctggacctcagccacaactcattggagggcctggacgagggctgcttctctggc
ctccccctggccgaggtggacctcagccacaaccacttccgagagtttgatctgaacatg
ttcatcactaaagatcacggagagccaatcagcgtggatctgtcccacaaccggctgaca
gtggtctcctggagttcttctaggagccccttgctacatgtccagagcctgactctagca
gccaaccagctgagggccgtgcccaagctaaaaggcatcctgctgagggacttaaacctg
gatgggaacagtatctcccgcattgaggagggtgcttttgaggacctcaaggaccttgtt
tacctgtccctcagtgggcttcctgagctctttaatatccagcccaactgtttcagaggc
ctacagaaccttcaggtgttggacctctccaacaatgccaagctaaaaacactgagccca
gctgtgttcagtggacttgtgtctctacaggagctcaatctgtcaaactctggagtaacg
tcattgccaaataacatgctaagtcacttgccaatcatcaagagtatcaccctgggccag
aatatccattgttggagggctcaaaagcagggccagtttcacaggcagctcggacaggaa
cagaaacatgacgagatgctaacctgtgacgttgaaggggttatctcatga
DBGET
integrated database retrieval system
