Oncorhynchus nerka (sockeye salmon): 115141927
Help
Entry
115141927 CDS
T07952
Name
(RefSeq) arginine-glutamic acid dipeptide repeats protein-like isoform X1
KO
K05628
arginine-glutamic acid dipeptide repeats protein
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115141927
Transcription factors [BR:
one03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
115141927
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Atrophin-1
ELM2
GATA
Myb_DNA-binding
Myb_DNA-bind_7
DUF7573
CCDC47
Motif
Other DBs
NCBI-GeneID:
115141927
NCBI-ProteinID:
XP_029537194
LinkDB
All DBs
Position
LG2:complement(48336018..48353898)
Genome browser
AA seq
1266 aa
AA seq
DB search
MDDLFSPRRSLNSTQGEIRVGSSHQAKLPELQPRPVFGVQTQTENEELVWMPGVNDCDLL
MYLRAARSMAAFAGMCDGGSTEDGCLAASRDDTTLNALNMLHASRYDAAKALQRLVKKPV
PKLIEKCWSEDDVKRFIKGLRQYGKNFFRIRKELLPNKKTGELITFYYHWKKTPEATGTR
PYRQHRRQPSSRKAKTRATAATVNTPSQSQSMDISSASEDDLDSEDSEQGTCGHCATTTS
KDWQHGGRDNILLCTTCRTYYNKHGRLPPGPKPADPPFMFKPVKEEEEGNGKHGMRTRRS
RTPLSSLRSGHKRLTGSPTSEDLQSSSHPSPAPSGASSTSNASRTSCLEKTDNTKKPGKK
IKEEAPLPKSTKRSRESAAQDPEEPERTPTKRTKTLQVRQSGEQAECRSEGDGEAEAERG
EVEEESCSDSRSAQDDGSSDTKDIDQDNRSSSPSIPSPRQGNESDSDSSAQQLQGAHQAA
AETVSAPAAALAETQTPQIVPPPRVAGSNTSLPPQGTSPSAEPGQVQAQATPSPEPPQPS
ATSAQAGQSVSYQTSPPHNRPLPPSHPLAGPSPVPPPLGQAFHPPTPVFQGPLPSPGSLP
PTQPLSLHGAPTQCPHPQRPPPHFPREPSFPQALPLNSGPQIKPPPTTPIPPSHKQPPHL
SSSLAPPFPQMPSNLPPPPALKPLNSLPNQHPPGAPPPPLQLMPQSLPMQQGVPPQPPVL
TQLQNLPGRGSHSHPHSSLPSCSAPSALHPVLSASSPSTMGPVPSLQHSFPSLRPSPENP
IGIGGSHVQIKEEPLDECEELESPPPPPRSPSPEPLVVNVASHASQSARFFKHLDRGYNS
CSRTDLFFTPLASSKLAKKREEAVERSKREVEHNAREREKDRERERERERQEDKNARASS
SSHDSRMSDVQMSGQVHMRSSFEQPPTSVAAVPPYIGPDTPALRTLSEYARPHVMSPNNR
NHPFFVSLSPGDPLLAYHMPGLYAAEPSLRERELRNLRERELRERMKPGFEVKPPEMETM
HPSANPMEHFARHGALALPHIAGPPHHPFGHFHPVMQNHLERERQALALAGPQMRPELSY
AERLTAERLHAERMASVANDPAARLQMLNVTPHHHQHSHIHSHLHLHQQDPLNQGEDVCY
CHPGNGPHPLDPLAPGPRLARFPFPGGPIPNPLLNDLPHDHDMLRHPLFAYAAVAGAGYP
RELQGPIPQMSAAHQLQAMHAQSAELQRLAMEQQWLHGHHHLQHGGPLPGQEDYYSRLKK
EGDKPS
NT seq
3801 nt
NT seq
+upstream
nt +downstream
nt
atggacgacctgttcagtccgagaaggagcctgaacagcacgcagggggagatcagagtg
ggatcaagtcatcaggctaagctccctgagctgcaaccacgccctgtgtttggtgttcag
actcagacagagaatgaagagctggtgtggatgccaggggtcaatgattgtgacctcctc
atgtacctcagagctgccaggagcatggcagcgtttgcagggatgtgtgacggaggatcc
acagaggacgggtgtttggcggcctctcgtgacgacaccacactcaacgctttaaacatg
ttacacgccagccgttacgacgcagctaaagctctccagcgcctagtgaagaaacctgtg
cccaaactcattgagaaatgttggtccgaggatgatgtgaagcggttcatcaaaggtttg
agacagtacggcaagaatttcttcaggattcgcaaagagctgctgcccaacaagaaaacg
ggggagttgatcacattctactatcactggaagaagacgcctgaggctacaggcacgcgg
ccgtaccgtcagcaccgtagacagccgtcctcacgcaaggccaagactcgcgccaccgct
gccactgtgaacaccccttctcagtcccaatccatggacataagttcagccagtgaggat
gacctggacagtgaagacagcgagcaaggcacctgtggacactgtgccacaaccacctct
aaggactggcaacacggaggccgggataacatcctcctgtgtaccacctgtcgtacctac
tacaacaaacatggccgcctgccgcctggccctaagcctgctgaccctcccttcatgttc
aaacctgtcaaagaggaagaggagggcaacgggaagcacggcatgaggacccgacgcagc
agaacaccgttgtcttcattaagaagtggccacaagaggctgaccggctctcctaccagt
gaagacctgcagtccagtagccatccctctcccgcccccagtggagctagctccacctcc
aacgcatccagaacctcctgtttagagaagactgataacacaaagaagcctggcaagaag
ataaaggaagaggcgcccctaccaaagagtactaaacgttccagggagagtgcagcccag
gacccagaggagcctgagagaacaccaactaaaaggacgaagacactgcaggtcagacag
agtggtgaacaggcagagtgccggtcggagggcgatggagaggctgaagcagagaggggt
gaggtggaggaggagagctgctcagacagccgcagtgcccaggatgacggcagcagcgac
accaaagacattgaccaggacaaccgctcctcctcccccagcatccccagccctcgccag
ggcaacgagagtgactccgactcctctgcccagcagctccagggtgcccaccaggcagca
gcagagaccgtcagtgcccctgctgctgcccttgctgaaacacagaccccacagattgtt
cctccaccacgggttgcaggctcaaacacatccctgcctccccagggtacttctccctct
gcagagcctggccaggtacaggcccaggcaaccccctccccagagcctccccagccttca
gccacctctgctcaggctggtcagtcagttagctaccagacaagtcccccacacaaccga
cccctacccccctctcaccctctcgctggcccctcacctgtccctcctccgctgggacag
gccttccatcctccaactcctgtattccagggtcctcttccttctcctggctctctgcct
cccacccagcccctgtccctccatggtgctccgacccagtgcccccacccccagcgaccc
cctcctcactttcccagggaaccctccttcccacaggccctccccctcaactccgggccc
caaatcaaaccacccccaaccacacccatccctccatctcacaagcagccaccacacctc
tcttcttcccttgctccccctttcccgcagatgccgtccaacctgccccctcctccggca
ctgaagcccctcaactccctgcccaaccagcaccctcccggtgcccctccaccccccctc
cagctcatgccccaatccctgcccatgcagcagggagtcccaccccagcctcccgtgctc
acgcagctgcagaacctccctggcagaggcagccactcccacccccactcctccctgccc
tcctgctctgcaccctcagccttgcaccctgtcctctctgcctcttctccctctaccatg
ggtccagtccctagtctccagcactccttcccctctctacgcccctcgcccgaaaacccc
attggcattggagggtcacatgtccagattaaagaggagccattggatgaatgtgaggag
cttgagagtccgccccctccacccagaagtccctcaccggaacctttggttgtcaacgtc
gccagtcatgccagccaatcagcacgatttttcaaacacctggaccgtggctacaactcg
tgctccagaacagacctgttcttcactccccttgcctcatccaagctggccaagaagaga
gaggaggctgtggagagatccaagagagaggttgagcacaatgcccgagaaagggagaag
gacagagagagggagagggaacgagagaggcaggaagacaaaaatgctagagcgtccagc
tcgtcccacgacagccgtatgagtgatgtccaaatgtccggccaggtccacatgcgctcc
tccttcgagcagccccccaccagtgtggccgctgtgcccccttacatcggccccgacacc
cctgccctgcgcaccctcagtgagtacgcccgaccccacgtcatgtcccccaacaatcgc
aaccaccccttcttcgtgtctctgtcccccggggaccctctgctggcataccacatgcct
ggcctgtacgccgccgagcccagcctgagagagagggagctccgtaacctccgggagagg
gagctccgcgagaggatgaagcctggcttcgaggtcaagcccccagagatggagaccatg
catccatcagccaaccccatggagcactttgccagacatggagccttggccctgccgcat
atcgctgggccgccccaccacccctttggccacttccacccggtcatgcagaaccacctg
gagagggagaggcaggcactggccctggccgggccccaaatgcgtccagagctaagctac
gctgagcgactgactgctgagaggctccatgctgagaggatggcatctgtggctaacgac
ccggccgccaggctgcagatgctcaacgtcacaccgcatcaccaccagcactcccacatc
cactcacacctgcacctacatcagcaggacccactcaaccaaggtgaggatgtgtgttac
tgtcacccaggtaatgggccccaccctctggatcccctggctcctgggccccgtctggcc
cgcttccccttccctggaggccccatccccaaccctctgctcaatgacctgccccacgac
catgacatgttgcgacacccactgtttgcctatgccgctgttgcaggagcagggtacccc
cgtgagctccaggggcccatcccccagatgtctgcagcccaccagctccaggccatgcac
gcccagtcagcagagttgcagaggctggccatggagcagcagtggctacatggacaccac
cacctacaacacggggggcctctgcccggacaggaggattactacagccgtctgaagaaa
gaaggtgacaagccatcgtga
DBGET
integrated database retrieval system
