Oncorhynchus nerka (sockeye salmon): 115141957
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Entry
115141957 CDS
T07952
Name
(RefSeq) eukaryotic translation initiation factor 4 gamma 1-like isoform X1
KO
K03260
translation initiation factor 4G
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
one03019
]
115141957
03012 Translation factors [BR:
one03012
]
115141957
Messenger RNA biogenesis [BR:
one03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
115141957
mRNA cycle factors
Stress granule specific factors
115141957
Translation factors [BR:
one03012
]
Eukaryotic type
Initiation factors
eIF-4
115141957
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
MA3
W2
Motif
Other DBs
NCBI-GeneID:
115141957
NCBI-ProteinID:
XP_029537245
LinkDB
All DBs
Position
LG14:complement(47650038..47699311)
Genome browser
AA seq
1535 aa
AA seq
DB search
MVLMQGAYYPAQQQYTSSLPAAPVIINPPPQQQQLPPQQQIQPKRERKQVQITIRDPNQG
GRDITEEIMSGGTRSGTTPTPPQVSDDSSESSGSEGPAVAQANGENVTPVMVRPDDRGKP
AATLITGPPALSKTPELVKTAPTEVKLPDTGSKSPSLPQDLPIPPRVTTTLHTTASGTPP
LSTSPIADMMDAPAPAAAPALSAPKVPAYPAPLPEPRPTPAAEEQPSATKEAREEVKEKE
IKEVTEAREVTTSSKPEPSLAPVTNPSSSTNGVSATQPLPEEEPVALSITMPSLQAAEPL
LESPVAQQEELRLPNGLPLPSSQDPEKVSAELSECDLSPIAEPEVTPLQREAPAHVAATA
KPDPVVQAAVAPVVLADTAITTEVTPRQIEDEMDSPPSQRAIPPGENSMQAAVSVPKKKR
KMKDLNRKEAVGDLLDAFKEEQVVQSPPEQATPTSASDTEEPRPATTPAVAEVDETWEEK
EDKLDAENIEPKPGDLKYQYKEEQCRLIDPEEKKRYDRDFLLGFQFISAAMSKPEGLPQI
NDVVLDKANKAPLRQLDPSRLPGMNMGTDFTPSFANLGRPGMAGGGGGGGGGGHRGPPSG
MGGGGPRRSQQGQRKEPRRIINISSSLTEDVKLNKAEDAWKPAVKKAASGQAAPEEESDN
PEQAKTHELFKRVRSILNKLTPQMFQQLMKQVKELTIDTEERLKGVIDLIFEKAISEPNF
SVAYANMCRCLMGLKVPTTDKPGVTVNFRKLLLNRCQKEFEKDKDDDVIFEKKQEELDAA
AMEEKDRLKAELEEAKDIARRRSLGNIKFIGELFKLKMLTEAIMHDCIVKLLKNHDEESL
ECLCRLLSTIGKDLDFEKAKPRMDQYFVQMDRIIKEKKTSSRIRFMLQDVLDLRRNTWVP
RRGEQGPKTIDQIHKEAELEEHREVLKVQQQLLNQNTRGGRGGGGGGGRDQGNRGGQHPQ
SGQRSQPQDEGWNTVPISTKSRPIDTSRLSKITKPGALDFNNQLLAPQLGGKGMWGSWGK
GSSGGTTGAKPTGEATPESGGRLATSTLNRFSALQPQQPSSSGPSQDSDRRVPLRNSSSR
DRGSDKFERLDRGSNDRFGRRDDRNPVTKRSFSRETEEHSREKEHRGPSDPIRRVASMTD
DRGTRDRARSKDNVKREAAATPPAQTKPSLREEELEKKATAIIEEYLHINDMKEALQCVV
EMNSTRLLFVFVRSGLESTLERSPIARERTGLLLHQLYKAGTLPTEQYYRGLQAILEVAE
DMAIDIPHIWLYLAELITPMLHEGGIPMGPLFKEISKPLVPQGTAGVLLAQILTLLCRGM
SHKKAGAMWREAGLSWKDFLPEDEDVNKFVTEKNVEFTLGGGGDDEKSSKKKLSSEELNK
QLDRLIQDKADNQRICDWVEANLDETQISSNVFVRAVMTAICQSAILCENPYKLDAKVIT
RRAKLLHKYLKDEQKELQALYALQALMVEMEQPANLLRMFFDTLYDEDVIKEQAFYKWES
SKDPAEMQGKGVALKSVTAFFTWLREAEDEESDNS
NT seq
4608 nt
NT seq
+upstream
nt +downstream
nt
atggtacttatgcagggggcatactacccggcccaacagcagtacacgtcctccttgccg
gctgctccggttatcatcaaccctcccccccagcagcagcaactacctccacagcaacag
atccagcccaaaagggagcgcaaacaggtacagatcacaatacgagaccctaaccagggt
ggtagagacatcactgaggagattatgtcagggggcactcgcagtggcaccacccccaca
cccccacaggtgagcgacgactcttcagagtcatctggatcagagggcccagctgttgcc
caggccaacggtgagaacgtgacacctgtcatggtcagaccagatgacagagggaaacct
gcagccacactcatcactggccccccagccctgtctaaaacccctgaactggtcaagact
gcccctacagaggtcaaactcccagacacgggcagtaaatccccttccttaccccaggac
ctacccatacccccgcgggtaactaccaccctccacactactgcctctggcaccccccca
ctttcaactagtcccattgcagacatgatggacgcaccagccccggccgctgctccagcc
ctatctgcccctaaagtgcctgcttaccctgcacccctacctgaaccccgccccactcct
gcagctgaggagcagccctcagccaccaaggaggcgcgggaggaggtaaaggagaaagag
attaaagaggtaacggaggctagagaagtgactacatcatctaaacctgagccttccctt
gctccagtgaccaaccctagcagcagcactaacggtgtgtctgccacccagccactccca
gaggaggagccagtagccctgtccatcaccatgccctccctccaggcagcagaacccctg
ctggagtctcccgtcgcccagcaagaggagctccgtctgcccaacggcttgccgctcccc
agctcccaggaccctgagaaggtttctgcagagttgtctgagtgtgacctcagccccatc
gctgagcctgaggtgaccccattacagagggaggcacccgcgcatgtcgccgccacggca
aagcccgaccccgtcgtccaggcagccgttgcccccgtggtcctagctgacactgctatt
actacagaggtaacccctcgccaaattgaagacgagatggactctccaccatcacagcgc
gccatcccacccggggagaattctatgcaagctgctgtttctgtgcctaagaagaagagg
aagatgaaggatctgaacaggaaggaggctgttggagacctcctggatgcctttaaggag
gagcaagtagtgcagagcccgccagagcaggccacacccacttctgcctctgacacagag
gagccccgcccagccaccacccctgccgtcgcagaggtagatgagacgtgggaggagaag
gaggacaagctggatgcagagaacattgaacccaagcccggggatctgaagtaccagtac
aaagaggaacaatgtaggcttatagacccagaggagaagaagaggtatgacagggacttc
ctgctgggcttccagttcatcagtgctgccatgtccaagcctgagggcctgcctcagatc
aatgatgtggtgctggacaaggcgaataaggcccctctccgccagttggaccccagccgt
ttgccggggatgaacatgggcactgacttcacgccctcatttgccaacctgggcaggcct
ggaatggcgggaggaggaggtggtggtggaggaggtggacacagaggaccaccctctggt
atgggtggtggaggaccgcgtcgctcccaacagggtcagcgtaaggagcccaggaggatc
atcaacatctcttcgtctctgacggaagacgtgaaactcaacaaggctgaggatgcctgg
aagcccgctgtcaagaaggctgccagtgggcaagcggctcctgaggaggagagcgacaac
ccagaacaggccaagacccatgagctgtttaagagggtccgtagtatcctgaacaagctg
acccctcagatgttccaacagctgatgaagcaggtcaaggagctgaccatcgatacagag
gagaggctgaagggagtgatagatctgatctttgagaaggccatctctgaacccaacttc
tccgtggcctacgccaacatgtgccgctgccttatggggctcaaagtccccactacagac
aagccgggagtcactgtgaatttccgcaagctgcttctgaaccgttgtcagaaggagttt
gagaaggacaaggacgatgatgtcatctttgagaaaaagcaagaagagctggacgctgca
gccatggaggagaaggatcgcctgaaggcggagttggaggaggccaaagacattgcacgg
cggcggtcgctaggcaacataaagttcatcggtgagctgttcaagctcaagatgctgacg
gaggccatcatgcacgactgcatcgtcaagctgctgaagaaccacgatgaggagtcacta
gagtgcctctgtagactcttgtcaactataggcaaggacctggactttgaaaaggcgaag
cctcgtatggaccagtactttgtccagatggacaggatcatcaaggagaagaagacctct
tccagaatccgcttcatgctgcaggacgtactggacctcaggaggaatacgtgggtcccc
aggagaggagagcagggccccaagaccatagaccagatccacaaggaggcagagctggag
gagcacagggaggttctcaaggtgcagcagcaactcctcaaccagaacacccggggagga
cgtggtggtggtggaggaggaggtagagatcaggggaaccgcgggggccaacacccccag
tcgggccagaggagtcagccccaggacgagggctggaacacagttcccatctccaccaag
agcagacccatcgacaccagccgactcagcaagatcactaagcctggggctttggacttc
aacaaccagctgctggcgccccagctcgggggtaagggcatgtggggcagttggggcaag
ggcagcagtgggggcaccaccggagccaaacccaccggggaagccaccccagagtcagga
ggccgcctagccaccagcacccttaacaggttctcagccctgcagccacagcagccctcc
tcctcagggccctcacaggactcggacagaagagttcctctaaggaacagctcgagccgg
gaccgtggcagcgacaaatttgagcgtcttgaccgtggcagcaacgaccgcttcggccgg
cgggacgacaggaacccggtcaccaagcggagctttagtagggagacggaggagcacagc
agagagaaggagcaccgcggcccttctgatcccatacgccgcgttgccagcatgaccgac
gaccggggcaccagagaccgagctaggagcaaagataatgtgaagagggaagctgctgca
acacctcctgcccagaccaaaccttcattgagggaagaagagctggagaagaaggccaca
gctatcatagaggagtacctacacatcaacgacatgaaggaggcgctgcagtgtgtagtg
gagatgaacagcacccggctgctctttgtgtttgtacggagcggtctggagtctactctg
gagcgcagccccatcgccagagaacgcaccggcctgctgctgcaccagctgtacaaggca
ggcaccctgcccacagagcagtactacagagggcttcaggcgatactggaggtggcggaa
gacatggccatagacatcccccacatctggctctacctggctgagctcatcacccctatg
ctccatgaaggaggcatccccatgggaccgctcttcaaggagatatccaagcccctggtt
cctcaggggacggctggagttctgctggcccagatcctcaccctactctgcagaggaatg
agccataaaaaggcaggcgccatgtggagggaggcggggcttagctggaaagactttctg
ccggaggacgaggacgtcaacaagtttgtgacagaaaaaaatgtggagttcaccctggga
ggaggaggagatgatgagaagagcagtaagaaaaagctgagctcagaggagctgaacaaa
cagctggatagactcatacaggacaaggctgacaaccagaggatctgcgattgggtcgag
gctaacctggacgagacacagatatcctccaacgtgtttgtcagagcagtcatgacagcc
atctgccagtcggccatcctgtgtgagaacccttacaagttggatgcgaaggtgatcacc
cggagggccaagctgctccacaagtacctgaaggatgagcagaaggagctacaggctctc
tacgccttgcaggccctcatggtggagatggagcagcctgccaacctgctgcggatgttc
tttgacacgctgtacgacgaagacgtgatcaaagagcaggccttctacaagtgggagtcc
agcaaggaccccgctgagatgcagggcaagggtgtggccctgaagtcagtcactgccttc
tttacttggctccgtgaggccgaggacgaggagtctgacaacagctag
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integrated database retrieval system
