Oncorhynchus nerka (sockeye salmon): 115141961
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Entry
115141961 CDS
T07952
Symbol
farsb
Name
(RefSeq) phenylalanine--tRNA ligase beta subunit
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
115141961 (farsb)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
one01007
]
115141961 (farsb)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
one03016
]
115141961 (farsb)
Enzymes [BR:
one01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
115141961 (farsb)
Amino acid related enzymes [BR:
one01007
]
Aminoacyl-tRNA synthetase
Class II (U)
115141961 (farsb)
Transfer RNA biogenesis [BR:
one03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
115141961 (farsb)
Prokaryotic type
115141961 (farsb)
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Gene cluster
GFIT
Motif
Pfam:
tRNA_synthFbeta
PhetRS_B1
B5
B3_4
EAD7
Glyco_hydro_77
Motif
Other DBs
NCBI-GeneID:
115141961
NCBI-ProteinID:
XP_029537255
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All DBs
Position
LG14:47791559..47801890
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AA seq
589 aa
AA seq
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MPTVSVKRDLLFHALGRTYTDEEFDELCFEFGLELDEITSEKDIISREQGDTKAEGASDV
ILYKIDVPANRYDLLCLEGLVRGLQVFKQKMEAPRYRRVSPASSEPQRLVITEETTAVRP
HAVAAVLRNITFTQERYDSFIELQEKLHQNVCRKRTLVAIGTHDLDTISGPFTYTAKPPG
DIRFKPLNQAKEYTAQELMSLYKTDSHLRHYLHIIEDEAVYPVIYDSNGIVLSMPPIING
DHSKISLNTKNVFIECTATDLTKAKIVLDMMVTMFCEYCEEPFTVEEAEVVYPDGRTCQY
PELAYRKETLSADFINRKVGISESTEHIAQLLTKMCLRSEVMSDGDQIEVEIPPTRSDVI
HACDIMEDAAMAYGFNNIPRTTPRTYTIANQLPLNKLSELLRQDLAAAGFTEALTFALCS
QEDIADKLLKNISETRACRISNPKTAEFQVARTTLLSGLLKTVAANRKMPLPLRLFEISD
VVLKDESKDVGARNNRRLCAVYYNKSPGFEVIHGLMDRVMQLLEIKPGQGNGYHIQAAND
STFFPGRCAEIFACGKSIGRLGVLHPDVINRFELTMPCSALDIDIEHFL
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgccgactgtcagtgtcaaaagggatcttctgtttcatgccttgggcagaacatatact
gatgaagaatttgatgagttgtgttttgagtttgggctggagctcgatgagattacctca
gagaaggacatcatcagtcgtgagcagggggacaccaaggcagagggggcgtctgatgtg
attctgtataagatcgatgtcccagctaaccgctatgaccttctgtgtctggaagggctg
gtcaggggcctgcaggtcttcaagcagaagatggaagcccctcgctacaggcgtgtgagt
ccagccagcagtgagcctcagaggctggtcatcacagaggagacaactgctgtgcgaccc
cacgctgtggctgcagtcctgaggaacatcaccttcacacaggaacgctacgacagcttt
atcgaactacaggagaaactccatcagaatgtctgtaggaaaaggactctggttgccatc
ggcacccatgacctggacaccatttcaggccccttcacctacacagccaaaccacctggt
gacatccgcttcaaacctcttaaccaggccaaggagtacaccgcacaggaactcatgagc
ctctacaagacagacagccacttgcgacactatctgcacatcattgaagacgaggctgta
tatcctgtcatctatgacagcaacggcattgttttgtctatgcctccaatcatcaatggg
gaccattccaaaatctccttgaatacaaagaatgtttttatcgagtgcacagccactgac
cttaccaaggcaaaaattgtgttggacatgatggtgacgatgttctgcgagtattgtgaa
gagcctttcacggtagaggaggctgaggtggtgtacccagatggaaggacctgtcagtac
ccggagctggcttacaggaaggaaactctgtcagctgacttcatcaaccgtaaagttggc
atcagtgagtcaactgagcatatcgctcaactgttgaccaagatgtgcttgcgctcagag
gtcatgagtgacggcgaccagatcgaggtggagatcccgcccacgcgctctgacgtcatc
cacgcctgtgacatcatggaggacgccgccatggcgtacggtttcaacaatattccccgc
accacgccgcgcacatataccatagccaatcagctcccactgaataagctgtcggagcta
ctgagacaggacctggctgctgctggattcacggaggccctcaccttcgccctgtgttct
caagaggacatagctgacaagctgttgaagaacatctcagagaccagagcatgtcgcatc
tccaaccccaagacagctgagttccaggtggcgcgcaccaccctgctctcaggcctgctg
aagactgtggctgccaacaggaagatgcctctgcctctgaggctgtttgagatttcagac
gtggtgctcaaggatgaatccaaagacgtgggggccaggaacaaccgtcgcctgtgtgct
gtctactacaacaagagtccggggtttgaggtgatccacggtctgatggacagggttatg
cagctgctggagatcaaaccaggccagggcaatggctaccacatccaggctgccaacgat
tccaccttcttccctggtcgctgtgctgagatctttgcgtgcgggaagagcataggacgc
cttggggtccttcaccctgatgtcatcaaccgctttgagctcaccatgccatgctccgcc
ctggacatcgacattgagcacttcctgtga
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