Oncorhynchus nerka (sockeye salmon): 115141964
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Entry
115141964 CDS
T07952
Name
(RefSeq) paired box protein Pax-3-A-like isoform X1
KO
K09381
paired box protein 3/7
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115141964
Transcription factors [BR:
one03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
115141964
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PAX
Homeodomain
Pax7
HTH_23
HTH_32
Homeobox_KN
SEEK1
HTH_Tnp_IS1
Motif
Other DBs
NCBI-GeneID:
115141964
NCBI-ProteinID:
XP_029537257
LinkDB
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Position
LG14:47832882..47877756
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AA seq
496 aa
AA seq
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MTALAGAIPRMMRPMLAQNYPHSGFPLEVSTPLGQGRMNQLGGVFINGRPLPNHIRHKIV
EMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPKQGTTPDVEKRIEE
YKRDNPGMFSWEIRDKLLMDGICDRNTVPSVSSISRIMRSKFGGKGDDDDDEDEIEKKEL
EEHERRAKHSIEGILGDRSSHSDEGSDVESEPDLPLKRKQRRSRTTFTAEQLDELERAFE
RTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGASQLMAFNHLIPGGFPPSAM
SSLSPYQLSDSPYPPTSISQVVSEQASTLHRPQPLPPSSGHHQSSGGGGQDGGSAYCLAS
GRHSFSGYSDSFVTSGGPPMNSAISNGLSSQVMGLLNPGGVPHQPQSDYALSPLTGGLEP
PGGMGASCSQRLEHIKGLEGLSSVPNIPSLPSLPNSQSYCPSSYSAPAYSVDPVASYQYG
QYHGQSALHYLRPEIT
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgactgcgttggctggggcaataccaaggatgatgcgccccatgctggcgcagaactac
ccccacagtggcttcccactggaagtctctaccccgttaggccaaggcagaatgaaccag
ctcgggggagttttcataaatggcagacctttgcccaaccatatccgccataagatcgtc
gaaatggcccaccatggcatcaggccatgcgtaatctcccgtcagctccgcgtctctcac
ggttgcgtttctaaaatcctctgccggtaccaggagaccggctctattcggcccggggcc
atcgggggaagcaaacccaagcaggggacgacgcctgatgttgagaagagaatagaggag
tacaagcgggacaacccgggtatgtttagctgggagattcgggataaattactgatggat
gggatatgtgaccggaacaccgttccatcagtgagctctatcagtcgcatcatgaggagt
aaattcggagggaagggagatgacgatgatgatgaagatgaaatcgagaaaaaggaatta
gaagaacacgaacggcgggccaaacacagcatcgagggcatcttaggagaccgatcgagc
cactcagatgaggggtcggacgtggaatctgaaccagacctgcctctgaagaggaagcag
cgccgcagtagaaccaccttcactgccgaacagctggatgagctggagagagcctttgaa
cgaacacactaccctgacatctacaccagggaagagctggctcagagggccaaactcaca
gaggccagagttcaggtgtggttcagtaacagaagagctcggtggaggaagcaggctgga
gctagtcagctcatggccttcaatcacctgatccctgggggcttcccgccctctgccatg
tccagtctctcaccttatcagctgtctgacagcccgtatccccctacatccatatcacaa
gtggtgtcggagcaggccagcacgctgcaccggccccagcccctgcccccgtcctcaggc
caccaccagagctcaggagggggaggacaggatggggggtctgcctactgcctggcctct
ggacgccacagcttctcaggctactccgacagctttgtcacgtcaggaggccctcccatg
aactctgccatcagcaatggcctctcttcacaggtgatgggtctgttgaacccaggtggg
gtgccccaccagccccagagtgactatgccctctcccccctgacaggaggcctggagccc
cctgggggcatgggggccagctgctcccagcgtctggagcacatcaagggtctggagggc
ctgtccagtgtccccaacatccccagtctcccctcgctgcccaactcccagtcctactgc
ccgtcctcctacagcgctcctgcctacagcgtggaccctgtggcctcctaccagtatggg
cagtaccacggacaaagtgcccttcattatctgagacctgagatcacctga
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