Oncorhynchus nerka (sockeye salmon): 115141985
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Entry
115141985 CDS
T07952
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 2-like
KO
K05046
solute carrier family 6 (neurotransmitter transporter, GABA) member 13
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
115141985
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
one02000
]
115141985
Transporters [BR:
one02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
115141985
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Motif
Pfam:
SNF
Ezh2_MCSS_fung
Motif
Other DBs
NCBI-GeneID:
115141985
NCBI-ProteinID:
XP_029537293
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Position
LG2:complement(48425242..48460657)
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AA seq
640 aa
AA seq
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MLSEGNTDQSAVTAQTQTTARMGEETMVMEGNFPKDHSHNLPAQDISLVKGQKKSQLLLD
RGQWANKLEFLLAVAGTLVGLGNLWRFPYLCYKNGGGAFLIPYVLFLLSCGIPMFLLETA
MGQYTSQGCITCWRHFCPLFEGIGYATQVVIAYAAVSYIIIQAWAFFYLFSSFSAEVPWA
SCRNPWNTESCVEFDKRNLSANWTVPVNATSPATEFWERRVLSISTGIEQIGRLRWELAL
CLLLAWILCYFCVWKGVKSTGKVVYFTATFPYLMLIVLLARGLTLPGAIDGIKFYLYPDP
ARLVDPQVWMDAGAQVLFSFGICQGSLTALGSYNHYNNDCYKDTFVLCLVNGGSSFVAGF
AIFSVLGFMSYEQGLPISEVAASGPGLAFIAYPRAVAMMPLPQLWSICFFVMVILLGADT
QFVSLECLMTSVTDMFPTVFRRGYRRELLLLCLCSVCFFLGLLLVTEGGLYFLQLFDHYV
CSGNNLLLLSVCQSIAIGWIYGVDRLYDNIEDMIGYRPWPVIKYCWLYVTPTVCLGTFIF
SLVQYKPLKFNKTYLYPDWAYALGWFLGLACVALVPLWMIWKVYRSKLTVWQSLKQLCRP
ETNKALNQKQQTPEQCPLNPDSILNLEYKGSGVVELEMHT
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgctgtctgaggggaatactgatcagtctgccgttacagcacagacccagaccactgcg
aggatgggggaggagacaatggtaatggagggaaatttcccaaaggatcacagtcataac
ctgcctgcccaggacatcagtctggtgaagggccaaaagaagagccagttgctgctagac
cgtggccagtgggccaacaagctagagttcctcttggccgtggcaggcaccttggtgggg
ctggggaacttgtggaggttcccatatctgtgttacaaaaatggaggaggtgcattcctg
attccctatgttctgttcctgctctcctgtgggatccccatgttcctcctggagacagcc
atgggacagtacacctcgcagggctgcatcacctgctggagacacttctgccctctcttt
gaagggattggttatgccacccaggtggtcattgcatatgctgcagtgtcatacatcatc
atccaggcctgggccttcttctacttgttctcctccttcagtgccgaggtaccatgggcc
agctgcagaaacccctggaatacagaatcttgtgtagaatttgacaagaggaatctgtca
gctaactggacagtccctgtgaatgcaacttcacctgcgacagagttctgggagcgcagg
gtgttgagcatctcaacagggatagaacagattggtagactgcggtgggagctggctctg
tgtctgctgctggcctggatcctctgctacttctgtgtctggaaaggagtgaagtctact
gggaaggtggtgtatttcacagctacctttccctatctgatgttgatcgttctattggct
cggggactcacgttacctggagctattgatgggatcaagttctacctctacccggaccct
gcaagactggtcgacccacaggtatggatggatgctggagcacaggtgcttttctccttt
ggtatctgtcaagggagtctgactgcactgggcagctacaatcattataacaatgattgc
tataaggacacgtttgtgctgtgtttggtgaatggaggatcaagcttcgttgctgggttt
gctatcttctctgtgttgggcttcatgtcatatgaacaggggctgcccatatctgaagtt
gcagcatctggtcctggcctggctttcatagcctatcctcgtgccgtggccatgatgcct
ttacctcagttgtggtccatatgtttcttcgtcatggtcatcttgctgggcgctgacaca
cagtttgtcagtctggagtgcctgatgacctctgtgacagacatgttccccaccgtgttt
cgaagggggtaccgtcgagagctgctgctgctttgtctctgctctgtctgcttcttcctg
ggactccttctggtcacagagggaggcttatattttctacaactttttgaccattacgtg
tgcagtggcaacaatctccttctgctctccgtctgccagtcaatagcaatcggttggatt
tatggagtggatcgtctctatgacaacatagaagatatgattgggtatcgtccctggcca
gtgattaagtactgttggctttacgtcacccctacagtctgtttgggtacattcatcttt
tccttggtacaatataagcccctaaagttcaacaaaacctatttgtaccctgactgggca
tatgcattggggtggttcctggggctcgcctgtgtggctctggtgcctctgtggatgatc
tggaaggtctatcggtccaaattgacagtctggcagagcctaaaacagctatgtcgccca
gaaaccaacaaggccctcaaccagaagcagcaaactcctgaacagtgccctctgaaccca
gattccattcttaatcttgagtacaagggaagtggtgtagttgagctagagatgcacaca
tga
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