KEGG   Oncorhynchus nerka (sockeye salmon): 115142192
Entry
115142192         CDS       T07952                                 
Name
(RefSeq) mediator of DNA damage checkpoint protein 1-like
  KO
K20780  mediator of DNA damage checkpoint protein 1
Organism
one  Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:one00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:one03400]
    115142192
DNA repair and recombination proteins [BR:one03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    115142192
SSDB
Motif
Pfam: BRCT_2 RTT107_BRCT_5 BRCT FHA PTCB-BRCT
Other DBs
NCBI-GeneID: 115142192
NCBI-ProteinID: XP_029537513
LinkDB
Position
LG14:7301187..7313428
AA seq 2150 aa
MEATQLIDDSILEESEEEDDGEKRGEPLAKLRVLKNKHITETELPLYQGENVLGRNPDSC
SLPLVARSVSKQHTIISISMFRGNRRHGNVATMETEALVWDLGSMNGTRKGRTKLTPHVR
YALTEGECVVIADIPCQYVSVDQRGGQGHMQNPTNTHSGRGRRTGPDRKAQLRGSPSGQG
LGRETGTPKTEGREVNGEIGAPSLTELGGKGTNLAKPLSFEQTPTQPERTLVPESDSDGE
REGRRDKRGKYFVSDSDSHMSSPTCSTFLSPTTKVIPESEDESPITPSSSAKNRPKKIVS
FSEEESDMDGPRQQPRRRRAQVIVYDSEEEEEGKEGTEALGEKETGKRTRGKEDVSVVNQ
VSQAERDRLTPSAPMVSTEDTSNMDSDTDVEGEEEMGLSAPVNAVKPPAATEPPTTDSDP
GQIHLDSDTDVEGEEEMGLSAPVNAVKPPAATEPPTTDSDPGQIHMDSDTDVEEGDTMDG
DSKLMLTAADVERKPVDSVPVMQPTEIHLDSDTDVDDDVVVSDSATNVTSFVSDPAEKPD
DPAPAVPPVEFHLDTDTDVEEEDTHSKTFPESDSSGIRTGIAGPQEILLDSDTDEEDNPF
TPPASSRTAELLNPPTSVGPAAAAPLEIRSDSDTDLEEDATQTMNLPPNVTTVTEDAVLA
LRQAVLPSPTITTTTGAVTKTITLRSQDSDADTDAEEERLEPKPPQCRPPAGMVPESDLS
EPSDFMVDSDTEEDGPGKAGQGQTACRLREGAVGPGLLPLGGSPGPHQKCSTPLASSVQE
EMETQAFFCPSDPFRRPALPPVLRPTAALSCSASDSQEDDDFVVAETQSFVFEAQNQGHQ
SSLPVEPTLDATQPYGLEPSLGEDREEQPSRGSFQLGLSDSSHLHLQARDQASESTQAFS
FPDGDSDLEATQTYGSGGGREEPGLGQRSAVFRRNRQVDFVLEATQAYAAQPRSDTEEED
EEETQPLEFPTQSNVATTETLPMSAYEEEDGEEEEYLVGAKPLTPVRRGRSGGAREREEE
EQETQTGEVLTNQYLSTAQTLDMVQESDDEEEAKPDSPRRRRTQKQTVDEEETQTVGSYL
STAETQPMFTAAEDDDDNEEEELKPPSPRRKGMSQRGRVEEETQPSEFLTSSHISTAETQ
PMGTCDTEEEEEEDTKAKGQAQRERGKESEAGTSGVSSRGRRGARGGEEENSETLKTQMR
GKGKAVNTAGGGGRRKVFPEEEEAEVVEQGRRGRGRKSVKQQKEGEKERLEEEEGIEKER
QEQAEKERLQKEKVESERVMKEQQDRESMVQELKEQDERLERERVEREETMEREKREQEK
RERLERERKEREEQERLQCERTKREKKERLQEETERIERERKEIEERNRLEREEKEKQER
LEVENREREALERSERERVEKERIEGEQAEKQRSEKEKMEREEKRKQERELLKKKKEEKE
RNLKEKLEREKKEREKREAEEKEKEIKERQAKEQGEKQAKIDDENELKTSRRGRRATTRR
TVTVPPTTEPQPELNILSSTPEPVPASITRSRSNSSNSVSSERSSIDTLGSRRRGGRKTT
STTEPAPGPDNPTRNSTRRRTLVGTVVAPPAAVEVTVQDILSSEQFVARRTRSTSTNSHS
STNSEVSTCIVDSVSSQSKGRGGGRRRKTGTESLSPSNRQSEQPPALKPTARGRRSQKVE
DDGPHPVINENAYSQEAGGTTRGQNKTAKTNEPDPVVADEETTPAQVTEDSPAPRGNGRG
RGRAGQKDNTPESTTTTAGGDTPSEEGVESKTGGRGKGRKRGLEEEEEENSGFKVPRRKA
KVQRGGRCRAAEEGEKEEKPASTPPKRGRTSTAQVKKIAEEEKSMEEQSEKMEEEEAGAV
QRKVRGRQSTVQIKEKEEPVLDSNSVVPQTPTGKGRGKRRAPVESSPLARTPRSSSASPL
SSLSSPGTLGPERAATQSYKVLFTGVVDEEGGKVVSCLGGSLAKGVADMTHLVTDRVRRT
VKFLCAVARGVPVVTTDWLDKCGKVGRFLPTDRYLVKDREQENKFSFCLEESLRTASTQP
LLQGYEVHVTRSVLPEPAQMKDIIVCSGARFLSTMPSTQKAQARTLVISCGEDWSLCAPA
LSASLPVLSAEFLLTGILQQRVNLVTHVLSAPKPRAQPGAKGQARGRKRM
NT seq 6453 nt   +upstreamnt  +downstreamnt
atggaggcaacacagctgatcgatgactcaatattggaagagtcagaggaggaggatgat
ggagagaagcgaggagagccactggccaaactcagggtgttaaaaaataaacacatcaca
gagactgagttgcctctctaccagggagaaaatgtgttgggtcgaaacccagactcctgc
tccctgccccttgtggcccgctctgtatccaagcaacacaccatcatctccatctcaatg
tttcgcggcaaccgtcgtcacggcaatgttgccaccatggagacagaggctttagtgtgg
gacctgggcagcatgaacgggacaaggaagggccggaccaaactgacccctcacgtccgc
tacgctctgaccgagggagagtgtgtggtaatagctgacatcccctgccagtatgtctct
gtggaccagagggggggacaggggcacatgcagaacccgacaaacacacactctggaagg
ggaaggaggacagggccagacaggaaggcccagctcagaggaagccctagcggccaaggt
ctgggacgagagactggcacaccgaagactgagggtagagaagttaatggagagattggg
gcaccatcgttgactgagctgggtggaaaaggtacaaatctggccaaacccctgtcgttt
gaacaaacccccacacagcctgagaggacactggtgcctgaatctgactccgatggagag
cgagagggacggagagacaaacggggaaagtactttgtctctgattctgactcgcacatg
tccagtcccacctgttctacatttctcagtcctacaaccaaagtcattccagagagtgag
gacgagagccccatcactccctcctcctctgctaaaaacagacccaagaaaatagtgagc
ttcagtgaggaggagagcgacatggatggaccgagacagcagcccaggagaagaagagca
caagtgatagtgtacgacagtgaagaagaggaggaggggaaggaaggcacagaggcacta
ggagagaaggaaactggcaaaaggacaagaggaaaggaggatgtgtcagtggtgaaccag
gtcagtcaagctgagagagatcgattaaccccctctgcaccaatggtgtctacagaggac
acgtctaacatggacagtgacacagacgtagagggagaggaggagatggggctgtctgca
cctgtaaacgctgttaagccaccagccgcaacagaacctcctactacagactctgaccca
ggccagatccacctggacagtgacacagacgtagagggagaggaggagatggggctgtct
gcacctgtaaacgctgttaagccaccagccgcaacagaacctcctactacagactctgac
ccaggccagatccacatggacagtgatactgatgtagaggaaggggatactatggacggt
gactctaagttaatgctaactgctgccgatgtggagaggaaaccagtagattctgtccca
gtgatgcagccaacagagatacacctggacagtgatacagatgtggatgatgatgttgtt
gtgtcagacagtgctaccaatgttacctccttcgtatccgatccggctgagaaaccagac
gatcctgcccctgcagtgccacccgtagaattccacctagacactgacacagatgtggaa
gaggaggacacacattccaaaacatttccagaatcagattctagtgggatcagaacaggg
attgctggtccccaggagatccttttggacagtgatactgatgaagaagacaacccgttt
acccctccggccagcagcagaacagcggagctccttaatccacccaccagtgtaggacct
gcagctgctgctcctctggagatcaggtctgacagcgacacagacttagaggaagacgcc
acacagaccatgaaccttcctcctaatgtcaccacggtaacggaggatgcggtgttagcg
ttgcgacaggccgtgcttccatcacccacaataacaacaacaaccggtgctgttaccaag
acaatcactctcaggtctcaggactctgatgctgacacagatgctgaggaggagaggttg
gagcccaaacccccccagtgtcggcccccagcagggatggtcccggagtcggacctcagt
gagcccagtgacttcatggtggacagtgatacggaggaggatggaccagggaaggcaggc
cagggacagactgcatgtcggctcagagagggggcagttggccccgggctgctccccctg
gggggttcccctggccctcatcagaagtgctccacccctttggcatcgtcagtacaggag
gagatggagactcaggccttcttctgtccctctgaccccttcagacgcccagccctccct
cctgtgctgaggcctacagcagcattgtcctgctctgcatcagacagccaggaggacgat
gactttgtggtggccgagacccagtcatttgtgtttgaggcccagaaccagggccatcag
agcagccttccagtggaaccaaccctggatgctacgcagccctacggtctggagccttcc
ttgggggaggaccgggaggagcagccgagccgaggctccttccagctgggtctatcagac
agcagccacctccacctccaggccagggaccaggcctcagagagcacccaggcattcagc
ttcccagatggggattctgacctggaggccacccagacctatggatctggaggggggaga
gaggagcctggcctgggtcagaggtctgcggtgttcaggaggaacaggcaggtggacttt
gtcctggaggcaacacaggcttatgctgcccagcctcgcagtgacacagaggaggaagat
gaggaggagacgcagcccttggagttccccacccagtctaatgttgctacgactgaaacc
ctgcccatgtctgcctatgaggaagaggacggtgaggaggaggaatatttggttggggcc
aagcccctgaccccagtaaggagagggagatctggaggagcgagggagagagaggaagag
gagcaggagacccagactggtgaggtgctgaccaaccaatacctctccacagctcaaact
ctggacatggtccaggagagtgatgatgaggaagaagccaaaccagactcgcccagaaga
agacggacccaaaaacagacagtagacgaggaagagacacagactgttggatcctacctc
tccactgctgaaacccagcccatgtttactgctgctgaggatgatgatgataatgaggag
gaagaactcaaacctccatcacccagaaggaagggaatgtcccagagagggagagtagaa
gaagagacacaacctagtgagttcctcaccagctcccacatctccaccgctgaaactcag
cctatgggtacttgtgacactgaggaagaggaggaggaggacaccaaagctaaaggacag
gctcagagagagcgagggaaagagtcggaggctgggacaagcggtgtcagcagtagaggt
agaagaggagctagaggaggagaggaggagaactctgagactctaaaaacgcagatgaga
gggaaggggaaggctgtgaacaccgcgggaggcggagggaggagaaaggtgtttcctgag
gaggaagaggccgaggtggttgagcaagggaggaggggaagaggaagaaagagtgtgaaa
caacagaaagagggagaaaaagaaagacttgaggaggaagagggaatagagaaggaaaga
caagaacaggctgagaaggaacggttgcagaaggaaaaagtagaatcagaaagggttatg
aaggaacaacaggacagagagagcatggtacaggaacttaaagaacaagatgagagatta
gagagggagagagtggaaagagaagaaacaatggagagggagaaaagagaacaggagaaa
agagagcggcttgagagggaaaggaaggaacgagaagagcaagaaagactgcagtgcgag
aggacaaaaagagaaaagaaggagagattacaggaagaaacagaaagaatagagcgggag
aggaaagaaatagaagagaggaacagactggagagggaggaaaaagagaagcaagaacga
ttggaggtagaaaacagggaaagggaagcgcttgagcgatcggagagagaaagggtggag
aaagagaggatagagggagaacaagcagaaaagcaaagatcggagaaagaaaaaatggaa
agggaagaaaagagaaaacaggagagagaactattgaagaagaaaaaggaagagaaggag
agaaacctgaaagaaaaactggagagggagaagaaggaaagagaaaagagggaagccgag
gagaaagaaaaggagataaaagaacgacaggcaaaggaacaaggagaaaaacaagccaag
atagacgacgaaaatgagctaaaaacatccaggagaggtcgcagagcaacaaccaggaga
accgtcacggttccacccacaacggaaccacaacctgaacttaatattctgtccagcaca
ccagaaccagtcccagctagtataactaggtctcgctccaactcttccaactctgtcagc
tctgagagatccagcatagacaccctggggagcagaaggagagggggcaggaagaccacc
agcaccacagagccagccccgggtccagacaaccccacccgcaacagcaccaggagaagg
acgttggtagggacggttgtggctcctcctgctgctgtggaggtcacagtgcaggacatt
ctctccagcgaacagtttgttgccaggagaacccgctccacctccaccaactcccacagc
tccaccaactcggaggtctccacctgtatcgtggatagcgtgagctctcagagcaaaggg
aggggaggaggcagaaggaggaagactgggacagagtctctctcccccagtaacaggcag
agtgagcagcctccagccctcaagcccacagccagaggcaggagaagccagaaggttgag
gatgatggtccacaccctgttattaatgagaatgcttattctcaggaggctggtggtacc
actagagggcagaataaaactgccaaaaccaatgagccagaccctgtagtagcagatgaa
gaaaccactccagcccaggtaacagaggactcccccgctcctagagggaatggaagaggc
cggggccgagccggccagaaagacaacacacctgaatccaccactacaacagcaggaggg
gacactccaagtgaagagggagtggagtctaaaacaggtgggagagggaaagggaggaag
aggggtctggaagaggaggaggaggagaacagtgggttcaaggttccccggaggaaagct
aaggttcagaggggagggagatgcagggcagcagaggaaggagagaaagaggagaaacct
gcatccactccaccaaagaggggcagaacctccactgcacaggtgaaaaagatagcagag
gaggagaagagtatggaggaacagagtgagaagatggaagaggaggaggctggtgctgtg
cagaggaaagtccgaggcaggcagtcgacggttcagataaaggagaaagaggaacctgtt
ttggactctaattctgtggtgccccagacccctacaggtaagggcagaggtaaacgtagg
gcccctgtggaatcatcaccactagccaggacccctcgctcctcctctgcctctcccctg
tcctccctctcctcccctgggacactgggcccagagagggccgccacgcaatcctacaag
gtgttgtttacaggagtggtggatgaggagggggggaaggtggtgtcttgtctggggggc
agcctggcgaagggcgtggctgacatgacccacctggtgactgaccgggtccgacgcacc
gtcaagttcctgtgtgctgtggcccgcggcgtgcccgtcgtcaccaccgattggctggat
aagtgtggtaaggtgggtcgtttcctacctactgacaggtacctggtgaaggacagggag
caggagaacaagttcagcttctgtctggaggaatcactgaggaccgccagcacccaacct
ctactacagggttatgaggtccatgtgaccaggtcagtgttgccagagccagcccagatg
aaggacatcatcgtctgtagcggagctcgcttcctctccacgatgccctccactcagaag
gcccaggcccggaccctagtgatatcgtgtggggaggactggtctctctgtgctcctgca
ctctctgcttctctccccgtcctcagtgctgagttcctgctaactggtatattacagcag
agagtgaacctggtaacccatgtcctctcagcccccaaacccagggcccagccaggagcc
aaaggccaggccagggggaggaagagaatgtaa

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