Oncorhynchus nerka (sockeye salmon): 115142252
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Entry
115142252 CDS
T07952
Name
(RefSeq) calsyntenin-3-like
KO
K22661
calsyntenin 3
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
one04515
]
115142252
Cell adhesion molecules [BR:
one04515
]
Cadherins
Cadherin related
115142252
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CLSTN_C
Laminin_G_2
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
115142252
NCBI-ProteinID:
XP_029537560
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Position
LG14:18167764..18197942
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AA seq
702 aa
AA seq
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WSKRVEYTPGSGSIPLFPSLHLETCEETVWNIQATVELQTGHIGKGCDRDSYSDRSVRRL
CGAVRGEVDLLPPPSPAANWTSALPTLPSSDSSLVFSFNGSTHVAVVPDSVAAAVSGDHF
TLQLWMRRGGINTQPPTNQARGNRREEETIVCSTVKNDDSFSHYSLSVHGCRLSLFYWPD
VSAARPVKFLWKLEQVCDSEWHHLSLSVQFPSVTLYVDGVTFDPALIHDNGVIPNPAPRQ
RLVIGACWETEDKQKDILNNTIPEGKDTGKYVGGYRGLLSGVTVRPGSVEPHSVVECLYA
CREGLDFGDLETLGSGMKVHVNPSQSVLVLEGDDIESFNRAVQQVTYRNSLRFATPGVRP
LKLTTSLRCFNEESCLTLRQLEGYLVVLQPDAPQISLSGVGPHLARPAPEFEGPRGVPLF
PELRIVCSLSHAVNTAAQGMEGGALMSDAVAHTLDGCEVQPLGEELNPEREELLVDMDAL
RERGLEIINTTAYIAITGAESISVYEDVLRSVRYRLAKGSARFERRFRLSCSEMNGRYTS
NELTLEVNFLHSLDSLYHPSHLLASQQQFLHPSHHSGELSGHTLPNPHRNSVVPGAATVI
IMVCVGFLVVMVILGVFRIRSIHRRGEGTRGGSKEDSGQWDDSALTIIVNPMESYESRMG
ISADTEGEGEEDEEVVESPDNANDDQRIIIKKEGRDGNPRRY
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
tggtcgaagcgggtggagtatacccccgggtcaggcagcattcccctgttccccagtttg
cacctggagacctgcgaagagactgtgtggaacatccaggccaccgtagagctgcagact
ggccatattgggaagggctgtgacagggacagctactcagaccgatcagtgcgcagactc
tgtggtgctgtgagaggtgaagtggatttactcccgcccccatccccagcagccaattgg
acctcagccttgcccaccctcccttcttctgattcgtccctggtgttctccttcaatggc
tccacccatgttgctgtggtacccgactccgttgccgcggccgtatccggagaccatttc
accctccagctgtggatgcgaaggggtgggatcaacacccagcctccgactaatcaggcc
agaggaaaccgcagggaggaggagactatcgtctgcagtaccgtcaagaatgacgactcc
ttctcccactactctctctccgttcacggctgccgtctctctcttttctactggcccgac
gtctccgctgcgcggcccgtgaaattcctctggaaactggagcaggtgtgtgacagcgag
tggcatcacctgtccctcagtgtccagttcccctctgtgacactgtatgtggatggagtc
accttcgaccccgccctcatccacgacaacggagtcatacccaaccctgccccacgacag
cgactggtcattggcgcctgctgggagacagaagataaacagaaggacatccttaacaac
accatccctgaagggaaagacacagggaagtatgtggggggttaccgtggcctgttgtca
ggggtgacggtgcgtccagggagtgtggagccccacagtgtggtggagtgtctgtacgcc
tgcagagaggggctggactttggggacctggagaccttgggctcaggcatgaaggtgcat
gtgaacccaagtcagtctgtgctggttctggagggtgatgacattgagagcttcaacagg
gccgtgcaacaggtcacctacaggaactctctccgcttcgccacccctggagtcaggcca
ctcaaactgaccacctctctcaggtgtttcaatgaggagagttgtcttacgctcaggcag
ttggagggctacctggtggtccttcagcctgacgcccctcagatctccctgtctggggtc
ggcccccacctggcccgccccgcgcctgaattcgagggcccccgtggtgtacccctcttc
ccagagctgaggatcgtgtgctccctgtctcatgctgttaacacagccgctcagggcatg
gagggaggagctctgatgtcagacgccgtggcccacactctggacggctgtgaggtccag
cccctgggggaggagctaaacccagagagggaggagctcctggtggacatggatgccctg
agagagaggggtctggagataatcaacaccactgcttacatcgccatcacaggagcggag
tccatctccgtatatgaggatgtccttcggtccgtccgttaccggctggctaaaggatcg
gcccgctttgagaggcggttccgtctgtcctgctccgagatgaatggcagatacaccagc
aacgagctcacattggaggtgaacttcctgcattccctggacagtctgtaccacccgtct
cacctcctggcctcccagcagcagttccttcacccgtctcatcactctggggagctgagc
ggacacaccctgcctaacccccaccgcaactcagtggtgccaggagcagccacagtcatc
atcatggtgtgtgtgggcttcctggttgtcatggtgatcctgggagtgtttcgaatccgc
tccatccaccgccgtggcgagggcaccaggggagggtctaaggaggacagcggccaatgg
gatgactctgctctcaccatcatcgtcaaccccatggagtcctatgagtctcgtatgggc
atctcagctgacactgaaggtgagggggaggaggacgaggaagtggtggagtcgcctgac
aacgccaacgacgaccagcgaatcatcatcaagaaagagggcagagacggcaacccccgt
cgctactaa
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