Oncorhynchus nerka (sockeye salmon): 115142256
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Entry
115142256 CDS
T07952
Name
(RefSeq) E3 ubiquitin-protein ligase E3D-like
KO
K20803
ubiquitin-protein ligase E3 D [EC:
2.3.2.26
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
one04121
]
115142256
Enzymes [BR:
one01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
115142256
Ubiquitin system [BR:
one04121
]
Ubiquitin ligases (E3)
HECT type E3
115142256
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT_2
Motif
Other DBs
NCBI-GeneID:
115142256
NCBI-ProteinID:
XP_029537563
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All DBs
Position
LG14:complement(20869967..20885997)
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AA seq
429 aa
AA seq
DB search
MGENTKGAGDPSGVFIELRKRLQSGLLFLRRDVAKSYAEVSVTGGDLSLHIRTPRVLLIV
ELPAGVSLVEGSCREAPGAGDEIHFRMRLNVDQHTDDTVNGALGSVMERLLVQESYCFHC
QSCGTRVLEERLFKRVLPLPNGNWSSLVDDWCCHPDPFANLKLLPRAEDCLLGDTHLLVP
RDRGCEETLTQELSPRPITNKMADGQNQDTPKPNRRRTLVSCKSCTAGLGEAVAPGTLKL
YITEVTVRPSVGDSQFDTSLDRSLFLEQTIAARLVELSSSQSMFRFSIQTPDGKAFILLW
LLNSDSLIVSLSATMSSAVRGDCCHLSRPPPIFDVCITLTDAVLYNFSSCLSLGLVIFFY
ISLSLSLANPLSLCVSSVVDTWEKDIGVHPLDLPQTTCQELLSVLTASTSCLPLSLHSMN
SYQVAYMRL
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgggagaaaataccaaaggagctggggaccccagtggggtgttcatcgaactaaggaag
cggttgcaaagtggtcttctttttctccggagagatgtggctaagagctatgcagaggtg
agcgttacaggaggagatttgtccctccacatccggactcctcgggtcctgctaatcgtg
gagctgccagcaggggtcagcctcgtggagggctcctgcagggaggcacctggagcagga
gacgagatacatttcagaatgcgcctcaatgtggaccagcacacagatgacacagttaat
ggggccctggggagtgtgatggagaggctgctggtccaagagagttattgcttccactgc
cagtcctgtgggaccagggtgctggaggagaggttgttcaagcgagtgctccctctcccc
aacggcaactggagctccctggtggatgactggtgttgccatccggacccctttgccaac
ctgaagctgctgccccgagcggaggactgtttactgggcgacactcacctccttgtgccc
cgggatagaggctgtgaggagactctcacacaggagctcagccccagacccatcaccaac
aaaatggctgatggtcaaaatcaggacacaccgaaacccaaccgcaggcgtacacttgtc
tcctgtaagagttgtacagccggcctgggagaggctgtggcaccagggaccctgaaactc
tacatcacagaggtgacggtgagacccagtgtgggagacagccagtttgatacctctcta
gacaggtcactgttcctggaacagaccatagctgccagactggtggagctgtcctcctcc
cagagcatgtttcgtttctctatccagaccccagatggaaaagccttcatattgctctgg
ctcctgaacagtgactccctcatcgtctctctctctgccactatgtcatcggctgtcaga
ggtgattgctgtcacctctcccggccaccgccaatatttgacgtatgtattactctgact
gatgcagtgctgtacaatttttcttcatgtctttctctcggtctcgttatttttttttac
atttctttgtctctttctctcgctaatcccttatctctgtgtgtgtccagtgttgtagac
acctgggagaaggacatcggtgtccaccccctagacctgcctcagaccacgtgccaggag
cttttgtcggtgctgacagccagtacttcctgtctccctctgtcgctgcattccatgaac
tcctaccaggtggcgtacatgagactgtaa
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