Oncorhynchus nerka (sockeye salmon): 115142421
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Entry
115142421 CDS
T07952
Name
(RefSeq) elongation factor 1-alpha, somatic form-like
KO
K03231
elongation factor 1-alpha
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
115142421
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
one03019
]
115142421
03016 Transfer RNA biogenesis [BR:
one03016
]
115142421
03012 Translation factors [BR:
one03012
]
115142421
04131 Membrane trafficking [BR:
one04131
]
115142421
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
one04147
]
115142421
Messenger RNA biogenesis [BR:
one03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
115142421
Transfer RNA biogenesis [BR:
one03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
115142421
Translation factors [BR:
one03012
]
Eukaryotic type
Elongation factors
115142421
Membrane trafficking [BR:
one04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
115142421
Exosome [BR:
one04147
]
Exosomal proteins
Proteins found in most exosomes
115142421
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
Gtr1_RagA
Motif
Other DBs
NCBI-GeneID:
115142421
NCBI-ProteinID:
XP_029537718
LinkDB
All DBs
Position
LG15:complement(1565862..1572522)
Genome browser
AA seq
462 aa
AA seq
DB search
MGKEKLHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVL
DKLKAERERGITIDISLWKFETSRYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGV
GEFEAGISKNGQTREHALLAYTLGVKQLIVGVNKMDSTEPNYSQKRYEEIVKEVSTYIKK
IGYNPDTVAFVPISGWNGDNMLEASPNMTWFKGWKITRKDGNASGTTLLEALDAIQPPSR
PTDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKPGMVVTFAPVNVTTEVKSVEMHHEALT
EAMPGDNVGFNVKNVSVKDIRRGNVAGDSKNDPPMEVASFTAQVIILNHPGQISAGYAPV
LDCHTAHIACKFAELKEKIDRRSGKKLEDNPKALKSGDAAIVAMVPGKPMCVESFSEYPP
LGRFAVRDMRQTVAVGVIKAVEKKAPSTGKVTKSAQKAQKVK
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaggagaagcttcacatcaacatcgtggtgatcggccatgtggactcaggcaag
tcgaccaccacaggccacctcatctacaagtgtgggggcatcgacaagaggaccattgag
aagtttgagaaggaggccgctgagatggggaagggctcgttcaagtacgcctgggtgctg
gacaagctgaaggcagagagggagcgaggcatcaccatcgacatctccctgtggaagttt
gagaccagcaggtactacgtcaccatcatcgacgccccgggacacagggacttcatcaag
aacatgatcactggcacctctcaggcggactgtgctgtgctcatcgtggcggcgggcgtg
ggcgagttcgaggcgggcatctccaagaatgggcaaacccgcgagcacgcccttctggcc
tacaccctaggggtcaagcagctgatcgtaggggtcaacaagatggactccaccgagccc
aactacagccagaaacgctacgaggagattgtgaaggaagtcagcacctatattaagaag
attggttacaacccggatacggtggccttcgttcccatctccggctggaatggggacaat
atgctggaggctagccctaacatgacatggttcaaagggtggaagatcactcgtaaggac
ggcaacgcctctgggaccaccctgctggaggccctggacgccatccagccgccctcccgc
cccactgacaaacccctccgcctgcccctacaggacgtctacaagataggaggtattggt
acggtccctgtggggcgggtggagacgggcgtgatcaagccaggcatggtggtgactttt
gcccccgtcaatgtgaccacggaggtcaagtcagtggagatgcaccacgaggcgctgact
gaggccatgcccggagacaacgtgggctttaacgtcaagaacgtgtcggtaaaagacata
cggcgagggaacgtggctggagacagtaagaacgacccgccgatggaggtggccagcttc
actgcacaggtcatcatcctgaaccacccaggtcagatcagtgccggctacgcccccgtg
ctggactgccacacggcccacatcgcctgtaagttcgctgagctgaaggagaagattgac
cggcgctcgggcaagaagctggaggacaaccccaaggccctgaagtctggcgacgcagcc
atcgttgccatggtccccgggaagcccatgtgtgtggagagcttctccgagtacccacca
cttgggcgctttgcggtgcgtgacatgcgtcagacggtggcggtgggcgtgatcaaggcg
gtggagaagaaggctccgtccacgggcaaggtcaccaagtcggcccagaaggcccagaag
gtcaaatga
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