Oncorhynchus nerka (sockeye salmon): 115142474
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Entry
115142474 CDS
T07952
Name
(RefSeq) ATP-dependent RNA helicase DDX39A
KO
K13182
ATP-dependent RNA helicase DDX39 [EC:
5.6.2.7
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
one03041
]
115142474
Enzymes [BR:
one01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
115142474
Spliceosome [BR:
one03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
115142474
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
115142474
NCBI-ProteinID:
XP_029537835
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All DBs
Position
LG15:complement(5414676..5421110)
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AA seq
427 aa
AA seq
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MAENDVDNELLDYEEDEEPQVAPETTTPAGKKEVKGSYVSIHSSGFRDFLLKPELLRAIV
DCGFEHPSEVQHECIPQAILGMDILCQAKSGMGKTAVFVLATLQQIEPVDGQVSVLVMCH
TRELAFQISKEYERFSKYMPTVKAAVFFGGLSIKKDEDVLKKNCPHIVVGTPGRILALIR
NKTLNLKNVKHFVLDECDKMLEQLDMRRDVQDIFRLTPHEKQCMMFSATLSKEIRPVCRK
FMQDPMEVFVDDETKLTLHGLQQYYCKLKDSEKNRKLFDLLDVLEFNQVVIFVKSVQRCV
ALSQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFN
YDMPEDSDTYLHRVARAGRFGTKGLAVTFVSDETDAKTLNDVQDRFEVNVAELPEEIDIS
TYIEQSR
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggcagagaatgacgttgacaacgagctgttggactatgaagaggatgaggagcctcag
gttgccccggagaccaccacacctgcgggcaagaaggaggtaaagggctcttatgtctcc
atccacagctccggtttccgagacttcctgctcaaaccagagctgctccgcgccattgtc
gactgtggctttgaacatccctctgaagtccaacacgagtgcatcccacaggccatcctg
ggcatggacatcctgtgccaggccaagtctggtatgggcaagacggctgtgtttgtactg
gccaccctgcagcagattgaacctgtggacgggcaggtgtctgtgctggtgatgtgccac
acacgagagctggccttccagatcagcaaagagtatgaacgcttctccaagtacatgccc
accgtcaaggcagccgtgttcttcgggggcttgtccatcaagaaggacgaggacgtgctg
aagaagaactgcccccacatcgtggtgggtacgcctggccgaatcctggccctcatccgc
aacaagaccctgaacctgaagaacgtgaagcactttgtcctggatgagtgtgacaagatg
ctggagcagctggacatgaggcgtgatgttcaggacatctttaggctcacaccccacgag
aagcagtgcatgatgttcagcgccaccctaagcaaagagatccgtcctgtctgccgcaag
ttcatgcaggatcccatggaggtgtttgtggacgatgagaccaagctgacgctgcacggt
ctgcagcagtactactgcaagctgaaggatagcgagaagaaccgaaagctcttcgacctg
ctcgatgtgcttgagttcaaccaggtggtgatctttgtaaagtctgtgcagcgctgtgtg
gctctgtctcagctgctggtggagcagaacttccctgcaatcgccatccacaggggcatg
gcccaggaggagaggctttcccggtaccagcagttcaaggacttccagaggcggatcctg
gtggccaccaacctgtttggccgagggatggacattgagcgtgtcaacatagtcttcaac
tacgacatgcctgaggactccgacacctacctgcacagagtggcccgtgctggcaggttc
gggacgaaaggtctggccgtgacctttgtgtctgacgagaccgacgccaagacactgaac
gatgtgcaggaccgcttcgaggtcaacgtggcagagctcccagaagagattgacatctcc
acctacattgaacagtccagatga
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