Oncorhynchus nerka (sockeye salmon): 115142517
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Entry
115142517 CDS
T07952
Name
(RefSeq) myomesin-2-like isoform X1
KO
K24495
myomesin
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
one00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
115142517
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
one04990
]
115142517
Domain-containing proteins not elsewhere classified [BR:
one04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
115142517
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
I-set
Ig_3
Ig_2
Ig_DSCAM-DSCAML_C
ig
Pur_ac_phosph_N
V-set
C2-set_3
C2-set_2
Adeno_E3_CR1
Motif
Other DBs
NCBI-GeneID:
115142517
NCBI-ProteinID:
XP_029537897
LinkDB
All DBs
Position
LG15:6084857..6114092
Genome browser
AA seq
1519 aa
AA seq
DB search
MATKVMHFNQKKHVSHVSHHSSHTTKHVVKEHSSRKSSSKSVNQVQHTHATEAMAEPAYT
VPAFRQRSADEIEEYQRVSSHVGKGLASIQKELHRMKVATKTQVENIAITREVQEMMHKK
VTSSTETGKAPDFMVALRPHTVWEKTPVKLFCTVDGHPRPIVKWYKGGKPVDPLSAPGKY
KMESKYGVHSLIISRCVVSDTAEYSAVATNSHGSTTSKASVTVKRPAGGACQLFGQVPHV
TVIHHSKLEITMLDRFGVSFGTEGGSIRLVCTMVVVPDLPNVPPLAQWYRDDKLLKAGKL
AEIKVGGGAATLTLPHLAKDDEGLYTLRMWTKDGTTEHSAYLFVKDAAPSVAGAPGAPIS
IKAFDINSDYVLVAWKPPNTTNEAAITGYFVDKRESGSATWSQCNDSPVRICKYPVHGLK
VGHAYHFRVRAVNSAGISRPSRESDKVTALDPAERERLQVIKLDGKHEVVIKDDDLEGYV
TLPGEPTDMHASEIFKSYIVLSWKPPSPRGRAPLWYIIEKSVSGTGAWQKINTAVKLQSP
RYPVFDLEAGKKYQFRVYSENLYGASEASKPTDPIEKVDEHGSERPVGVPSAPGQVVATR
NTKSSVFVQWDPPKHPNHLMGYYIDASLVGSKTWAPCNHKPYKHTRFVVHGLTPGETYVF
RVQAVNVYGLSDESQESTPIAVEPALKRGVEYATPSAPHGITMLSCDGASMIIAWNSPKH
GGGSKINAYYVDKRDADSLAWKEVNSAPTKTRTYTVNGLTEGTFYEFKVQAGNLAGVGVP
SAPSTPLKCEAWTSAVPGPAYDLAFREVRGDSLVILWKAPVYTGASAVTGYIVEMAKKGH
HYHPLNEEAIGHCYLQVTGLEAGAEYTFKVKAVNAEGVGKASQTSEPVVAKALPGTQEIQ
CGVDEDTGDIFLSFEACEISETSNFAWSKNYKEISDCPRVAIETKGKHSKLTFVNPDVSD
LGAFSVHVTDTEGVSASHTLTEDALNTMLELSYNIRHPIVPLKHQLNYEVLEKGHVRFWL
QCLKMSPAVTYRFIVNDKEVTSSDSHKISHDVNTGVIQMTVDHFSKASEATYTVQIHDGR
AKNQSSLVLVGDVFKAALKEAEFQRSEHIRKQGPHFAEYLSYHVDDDCTVLLVCKVANVK
KETVFHWFKDEEEIVLETPPNVMSGSVALPISLFSRKDQGHYKAKLSDDRGKDTSVFDIS
GQVFDDIINAIAHIAGSSASELVLQCTPEGIRLQCYMKYYTEEIRTAWLHKDSKISSSEK
MRIAGTAEMAWMQIREPSEKEKGHYSIQIMDATKSHTRTFDLSGQAYTDAYEEYLRLKAA
AFAEKNRGRVVGGLPDVVTIMEQKTLSLTCTVWGDPSPEVTWFKNENEVVSTEHAKITLE
ANKFASLTITAVTSEDSGKYSINVRNKYGGEFVEITVSVYKQGESPPEAKIGGRGATPAP
LASKTPAQTPTPAQTHIPQTPTPSLKSPTPSPKSPTPTAKSPTPTPKSPTPTPKSPTPTR
RVKSPSPARSLKSPTPPRK
NT seq
4560 nt
NT seq
+upstream
nt +downstream
nt
atggctaccaaggtcatgcattttaatcagaagaaacatgtgagccacgtcagccatcac
agctctcacactactaagcatgttgtcaaggagcactcttcaaggaaatcaagctctaag
tctgtgaaccaggtgcagcacacccacgccacagaggctatggctgaaccagcctataca
gtgccggcgttcaggcagaggagcgccgatgagatagaggagtaccagcgagtgtctagt
catgttgggaaaggacttgcttcaattcagaaggagctccacaggatgaaagtggccaca
aagacccaagtggagaatattgcgataacgagagaggtgcaggagatgatgcacaagaag
gtgacgtcgagtacggagacgggcaaggcccctgacttcatggtggctctgaggccccac
accgtatgggaaaagactcctgtcaagctgttctgcaccgtggacggtcaccccaggcct
attgtcaaatggtataagggaggaaaacctgttgacccactgagtgccccaggaaagtac
aagatggagagcaagtatggagtacacagtctgattattagcaggtgtgtggtgagtgat
actgctgagtacagcgccgtagcaacgaactcccatggctcaactaccagcaaggcctct
gtcactgtcaagagaccagcaggaggagcctgccagctttttggtcaagtgccccatgtg
actgtgatccaccacagtaagctggagatcaccatgctggataggtttggagtgtcgttc
ggaacagagggaggttccattcgtctggtgtgtaccatggtggtggtccctgatctgccc
aacgtaccaccactggcccagtggtacagagacgataaactgctgaaggcagggaagttg
gctgagattaaggttggtgggggcgctgccactttgactttgccacacctggcaaaggac
gatgagggtctgtacaccctccgcatgtggacgaaggacggcaccaccgagcacagtgcc
tacctctttgtgaaagatgctgctccctctgtggccggagcacccggtgcaccaatcagc
atcaaggcgttcgacatcaactcggactacgtcctggttgcctggaaaccccccaacacc
accaacgaggctgccatcaccggatactttgtggacaaacgtgagtctggtagtgctacc
tggtcccagtgtaacgactccccagtgcggatctgtaagtaccccgtgcacggcctgaaa
gtgggtcacgcctaccacttccgggtccgggctgtcaacagtgccgggatcagcagacca
tcccgcgagtctgacaaggtgactgccctggacccagctgagcgagagagactgcaagtg
attaaactggatgggaaacatgaagttgtgattaaagatgatgacctggaaggttacgtt
acattgccgggggagcctacagatatgcatgcctcagagatattcaaatcatatatcgtg
ctgagctggaaaccccccagccctcgtggacgggcaccactgtggtacatcattgagaag
tccgtgtcaggcactggggcttggcagaagatcaacacagcagtgaaactgcagtcccct
cgctaccccgttttcgatttggaagccgggaaaaagtaccagttccgtgtgtattctgag
aacttgtacggcgccagcgaggcctctaagcctacagatcccatcgaaaaggtggatgag
catggtagcgagcggcctgttggtgttccctcggctcctggtcaggtggttgccaccagg
aacaccaagtcctccgtgtttgtgcagtgggacccccccaaacaccccaaccacctcatg
gggtactacatagacgcctctttggtgggatcaaagacctgggccccatgcaaccacaag
ccctacaagcacaccaggtttgtggtccatggactgaccccgggagagacctatgtgttc
cgtgtccaggctgtcaatgtctatggcctcagtgatgagtcccaggagtctactcctatt
gctgtggagcccgccctcaagaggggagtggagtatgcgacgcccagtgcacctcatggc
atcaccatgctgagctgtgacggagcctccatgatcattgcctggaacagtcccaagcat
ggcggtggctccaagatcaacgcctactacgtcgacaagcgtgatgcagacagcctggcc
tggaaggaggtcaactctgcccccaccaagaccaggacctacacggttaatggtctgacg
gagggaaccttctatgagtttaaggtccaggctgggaacctggcaggtgtgggcgtgccc
tctgctcccagcacacctctgaagtgtgaggcctggacttctgcagtacctggtccagcc
tatgacttggccttcagagaggtgagaggtgactccctggtcatcctgtggaaggcccct
gtctacaccggtgccagtgccgtcactggatacatcgtggagatggccaagaagggccat
cactaccaccccctgaatgaagaggctattggccactgttacctgcaggtgactggtctg
gaggcaggagcagagtatacgttcaaagtgaaggctgtcaacgctgagggagtaggaaag
gcctcccagacatctgagccagtggttgccaaggctctgccaggcacccaggagatccag
tgtggagtggatgaggacactggtgatattttcctgtcattcgaggcctgtgagatttct
gagacctccaactttgcttggtctaagaactacaaagaaatcagtgactgtccaagagtc
gccatagaaactaagggcaaacactctaagctgactttcgtcaacccagacgtaagtgat
ttgggtgccttctctgtgcatgtgactgacactgaaggagtttctgctagccacaccctg
acagaggatgccctgaacaccatgctggaactcagctacaacatcagacatccaattgtc
ccactgaagcaccaactgaactatgaggttctagagaagggccacgtgcgtttctggctg
cagtgcctcaagatgtcacccgccgtcacctataggttcattgtcaatgacaaggaggtc
accagcagtgatagccacaagatcagccatgacgtgaacaccggggtgatccagatgact
gtggatcacttctccaaggccagcgaggccacctacaccgtccagatccacgacggcaga
gccaagaaccagagctctctggtcctggtgggagatgtgttcaaggctgccttgaaggag
gctgagttccagaggtcagagcacatcaggaaacaaggtccccactttgctgagtacctt
tcctaccatgtggatgacgattgtactgttctgctcgtctgcaaggttgccaatgtgaag
aaagagactgtgttccactggttcaaggatgaggaggagattgttctggagacccctcct
aacgtgatgtctggatccgttgctctccccatctccttgttctccagaaaagaccagggc
cattacaaagctaaactcagtgatgacagagggaaagacacttctgtctttgacatttct
ggccaagtgtttgacgatattatcaacgccattgcccacattgctgggtcctctgcctct
gagctggtgcttcagtgtaccccagaaggcatcaggctccagtgctacatgaagtactac
acagaggagatcaggactgcctggttgcataaggatagcaagatctcgtcgtctgagaag
atgaggatcgccggcacagctgagatggcctggatgcagatcagggagccttcagagaag
gagaagggacactactccatccagattatggatgccaccaagtcccacactcgcacattc
gacctctccggacaagcatataccgatgcctatgaggagtacctgagactcaaggctgca
gccttcgctgagaagaaccgtggtagagtggttggtggtctgccagatgtggtcaccatt
atggagcagaagaccctgagcctgacctgcacagtctggggtgaccccagtccagaggtc
acctggttcaagaatgaaaatgaggtagtctccactgagcacgccaagataacgcttgag
gccaataagttcgccagcctcaccatcaccgccgtcacgtccgaggattccggcaagtac
agcatcaacgtacggaacaaatatggcggggagttcgtggagatcaccgtgagcgtctac
aagcaaggcgagagcccccccgaggccaaaataggagggagaggagcaacacctgcaccc
ctggcctccaagacccctgcccaaacccctacccctgcccaaacccacatcccccagacc
cccaccccgtcccttaagtcccccaccccatccccaaagtcccccaccccaaccgccaaa
tccccaacccccacccctaagtccccaacccccacccctaagtccccaacccccactagg
cgtgttaagtcgcccagccctgccagatctctcaagtcaccaaccccccctagaaagtaa
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