Oncorhynchus nerka (sockeye salmon): 115142526
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Entry
115142526 CDS
T07952
Name
(RefSeq) prolargin-like
KO
K08125
prolargin
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
one00535
]
115142526
Proteoglycans [BR:
one00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class II
115142526
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Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRRNT
LRR_5
LRR_9
Motif
Other DBs
NCBI-GeneID:
115142526
NCBI-ProteinID:
XP_029537911
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All DBs
Position
LG2:51154863..51169213
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AA seq
380 aa
AA seq
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MKAAVGLYSALVLCLLMGAVFSQRPRPKKPPKPPKATKRPSFKPSLPPDELEPQEPTDFP
PPILGPPSMFLDCPRECFCPPSFPNALYCENRNLRTVPVIPSRVHYLYLQNNYISVVTAE
PFNNATELRWVNMANNRIRKVDKQVFEKVPGLLFLYMERNQLKEVPDDLPAGLEQLILSH
NQISKIPSGAFGKMEHLALLDLHHNKLSDSDVGKNTFKDMKNLVQLNLAHNILKKMPANI
PNGITQLFLDRNNIEDIPKDYFQGFSNLAFVRLNFNQLSDKGVPKAVFNVSTLLDLHLAH
NQLTSVPLFNPQLEQLHLNHNSIESINGTQLCPFSLSSESLTDEALMPRLRYLRLDGNHL
SPPVPLDVIMCFRHLKSIVI
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcagctgtgggactctactctgccctggtgctctgtctcctgatgggggcagtg
ttctcccagagaccgagacctaaaaaacctcctaagcctcctaaggccaccaagcggccc
tctttcaagcctagcctgccccctgatgagctggaaccccaggagcccacagacttcccc
cctcccatccttggccccccctccatgttccttgactgcccccgcgagtgtttctgcccc
ccctccttccccaacgccctctattgtgagaaccggaacctccgtacggtccctgtgatc
ccgtcgagagtccactacctttacctgcagaacaactacatctctgtggtaacagcggaa
cccttcaacaatgccacagagctgcgatgggttaacatggccaacaatcgcataagaaaa
gtagacaagcaggtgtttgagaaggtacctggtctgttgtttctctacatggagaggaac
cagctgaaggaggttcctgatgacctgccagctgggttggagcagctcattctcagccac
aaccagatctccaagatcccctctggagccttcggcaagatggagcaccttgctctgctc
gacctgcaccacaacaagttgagtgacagtgatgtggggaagaacacttttaaagacatg
aagaacctggttcagctgaacttggcccacaacatcctgaagaagatgccagctaacatc
cccaacggcatcacacaattattcctggacaggaacaacatcgaggacatccctaaggac
tacttccaaggcttctccaacctggcgtttgtgagactcaacttcaaccagctaagtgat
aagggagtacctaaggctgtgttcaacgtttccaccctgctagaccttcacctggcccac
aaccagctcacctccgtccccctgttcaacccccagctggagcaactgcacctcaaccac
aacagcattgagagtattaacgggacccagctttgtccattcagtctgtcctctgagagt
ctgactgatgaggctctgatgcccagactcaggtacctgcgtctggatgggaaccacctg
agccctcctgtccctctggatgtcatcatgtgtttcagacacctcaagtctattgtcatc
tag
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