Oncorhynchus nerka (sockeye salmon): 115142543
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Entry
115142543 CDS
T07952
Name
(RefSeq) keratin, type I cytoskeletal 13-like
KO
K07604
type I keratin, acidic
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
one00001
]
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
115142543
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
one04812
]
115142543
04147 Exosome [BR:
one04147
]
115142543
Cytoskeleton proteins [BR:
one04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Types I and II: Acidic and basic keratins
115142543
Exosome [BR:
one04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
115142543
Exosomal proteins of other body fluids (saliva and urine)
115142543
Exosomal proteins of colorectal cancer cells
115142543
Exosomal proteins of melanoma cells
115142543
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
AIF-1
TPR_MLP1_2
CCDC39
Mitofilin
CENP-F_leu_zip
FKBP15
RelA_AH_RIS
Nuf2_DHR10-like
YabA
Motif
Other DBs
NCBI-GeneID:
115142543
NCBI-ProteinID:
XP_029537941
LinkDB
All DBs
Position
LG15:6588449..6592123
Genome browser
AA seq
497 aa
AA seq
DB search
MSFSRSSMSYSSSGGGGGGGTMSMRSGGGGGMGMGSSRFSSMGGGGGGGRVTAMRAGSVY
GGAGGSGVRISSSSFGSGGGGGGGGYGFGMGGGGGGGGGGGFGFGMGGGGGGGGGADINV
SVNEKATMQNLNDRLSTYLEKVRLLEAANAELELKIRQFMESKTSPSARDYSGFYATIAD
LQDKIQDATCLNGSIYLNIDNAKLAADDFRNKYENELAMRQSVEADIAGLKRMLDEMTMA
RSDLEMQIEGLKEELIYLKKNHEEELLAMRTQMTGQINVEVDAAPQEDLSRVMAEIREQY
EAGSAKNQRDLEAWFQTKTETLNKEVASSTEVLQTSKSEISEIRRTLQGLEIELQSQLSM
KGSLENTLAETEGRYSMQLGRLQSQVTSLEEQLVSLRSDMERQGQEYKMLLDIKTRLEME
IAEYRRLLDGEASGLVHSSSKSGLSSSGSHISSSSSGLSSSSSGPSSSTSTTRKVVIVTE
EMVDGKVVSSSETKHTS
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgtccttctccagatctagcatgtcctacagcagcagcggcggtggaggcggaggtggc
accatgtccatgaggtctggaggtggaggtggaatgggtatgggctcctcccgcttctcc
tcgatgggtggtggtggtggaggaggccgtgtcactgccatgagggctggcagtgtgtat
ggaggagcaggaggctctggggtgcgcatctctagctcctcgttcggttccggcggcgga
ggtggtggtggcggttatggtttcggaatgggagggggtggtggcggcggcggcggtggc
ggctttggtttcggcatgggagggggtggtggtggtggcggtggagccgacattaatgtg
tcggtcaatgagaaggccacaatgcagaacctgaacgaccgcctgtccacctacttggag
aaggtgcgcctgctagaggcggccaacgccgagctggagctgaagatccgtcagttcatg
gagagcaagacgtcccccagcgctcgcgactactctggcttctacgctactatcgccgac
ctgcaggacaagatccaggatgccacctgcttgaacggaagcatctatctgaacatcgac
aacgcgaagctcgctgcagacgacttcagaaacaagtatgagaacgagctggccatgcgt
cagtcagtggaggcggacatcgccgggctgaagaggatgctggatgagatgaccatggcc
agatctgacctggagatgcagatcgagggactgaaggaggagctcatctatctcaagaag
aaccatgaggaggagctgctggccatgaggacgcagatgactggacagatcaacgtggag
gtggacgcagcaccacaggaggacctgtccagagtcatggctgagattcgtgagcagtac
gaggccggtagtgccaagaaccagcgtgacctggaggcctggttccagaccaagacagag
acgttgaacaaggaggtggcgtccagcacagaggttctccagacctccaagtcagagatt
tcggagatccgtcgcacactgcagggcctggagattgaactgcagtcacagctcagcatg
aaaggctccctggagaacacgctggcggagacggagggccgttactccatgcagctggga
cgcctccagagccaagtgaccagcctggaggagcagctagtgtctctccgcagtgacatg
gaacgccagggccaggagtacaagatgctgctggacatcaagacacgcctggagatggag
attgctgagtacaggaggctgctggacggagaggctagcggccttgttcacagctcctcg
aaatctggcctcagctcctccggctcccacatcagctcctctagctccggcctcagctcc
tccagctccggccccagctcatccacctccaccacacgcaaggtggtgattgtcacagag
gaaatggtggatggcaaggttgtctcctcaagtgaaaccaaacacacctcttaa
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