Oncorhynchus nerka (sockeye salmon): 115142565
Help
Entry
115142565 CDS
T07952
Name
(RefSeq) integrin alpha-X-like isoform X1
KO
K05718
integrin alpha L
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04514
Cell adhesion molecule (CAM) interaction
one04517
IgSF CAM signaling
one04518
Integrin signaling
one04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
115142565
04517 IgSF CAM signaling
115142565
04518 Integrin signaling
115142565
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
115142565
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
one04147
]
115142565
04515 Cell adhesion molecules [BR:
one04515
]
115142565
04090 CD molecules [BR:
one04090
]
115142565
Exosome [BR:
one04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
115142565
Cell adhesion molecules [BR:
one04515
]
Integrins
Integrin alpha subunits
115142565
CD molecules [BR:
one04090
]
Proteins
115142565
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
FG-GAP
Integrin_A_Ig_1
ITGAX-like_Ig_3
Integrin_A_Ig_2
VWA_2
FG-GAP_3
FG-GAP_2
Copine
vWA_Rv0959
Mid2
Motif
Other DBs
NCBI-GeneID:
115142565
NCBI-ProteinID:
XP_029537971
LinkDB
All DBs
Position
LG15:complement(6983662..7019335)
Genome browser
AA seq
1189 aa
AA seq
DB search
MAANIPPPAVMKLSGDWSTNWDTFRGEWEDYALATGLLEKEDEVVAATLRTTIGTECRHV
YKHNLHLTAAQQAVSSMAFNIDEANPKIYKGEEKDFFGYKVLQFISGKKKGVMVSAPYQK
NGSGGICRCALDRTDCTDCYTPQETDTIKYIGLSMAGQSTSPPTFTACSPGLAHECDGNS
YLNSICYQFNSQLQITSNFTPAFQECTKKIVDLVFLFDGSGSMTTEEFDKNKGFINNIMT
TLKNSSIKFAAVQFSSIARTVFNFNDYQEGRALTNLWKEKHMSSLTNTHQAIDFLLKNIF
ENQAAGATADATKVLVIITDGEPSDTDKRFNSINRSDDKNIIRFVIGVKNVDLTKLKSLA
SEPKENNTFLIQDYNGLKGILDNLQKKIFNIEGSKTALAGNLTKEMSQSGFSAVYVNKDT
LVLGSVGSNNWRGSLFETEGQRSEEREIQDPTLDKDSYMGYSVAVGKKNENLLYFTGAPR
SEHMGRILLFNKVNNNWTVAQRLSGEQMGSYFGAELCSVDIDSDGNTDFLLVGAPMFHQP
PREGRIYVYTLTDKQELRMEMNVSVMAQGRFGSSISSLTDLNGDGLKDVAVGAPLEDDHR
GAVYIYLGEKLKGIRPEFSQRISAAMMRSKLQFFGQTIDGKMDLGEDGLTDIVVGTRGAV
VVLRSRPVLSISAHLHFHPSEISTDNFDCLAKETISPVVTLTACFNMAEATKSKAGALSA
GMNVSYTLDVDPVRQRSRAFYNDTNKGARRLLSTVELRKERTCFNHSVYMTQCVIDTLSP
IIIQLNFSQSQSQQEGCTAILNTDSPTKAVVEVPFEKNCKENEACLAELEVDFNFITSTL
LVVDQSYFNVTIRLSNHGDDSYNTSLTLLYPPGLSFSTMHLLKSTRRTVFSCGGLEGEMD
RTTCSVSIPVYRSKTTAVFTSKFHILNTYNWNDTMEMTVIGLSDNGNSTNSSLTRTIPVQ
FAVDLVAKALPQDSTTYMNFTLEDTSPKRLVNVYEVQNLGFKSVPVTVTFTFPTKLEHRF
EMKDYEISVLQNHTQCGKVINSTTEYCSPEKYCKSIECESFLLEKFLTVTFVLSGNVSFK
DLDQHAKSLSLPKKFTGDRETVNFISLVKLSYDKKRYAQTASDPGDNSTGFHQTQIDVQA
EIIIHPQRELILGTGVGVGLFLLLIVTMAMYKMGCFQRKSPDYDENEGE
NT seq
3570 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgaacattccccctcccgccgttatgaagctcagcggggattggagcacgaac
tgggatacgtttagaggtgaatgggaggactatgcgctagcaacgggacttctggaaaag
gaagatgaggtagtggctgccactttgaggactacaataggaactgaatgccgacacgta
tacaaacacaacctgcacctaacagcagctcagcaagctgtctcttcaatggctttcaac
attgatgaagcaaacccaaaaatctacaagggggaggaaaaggatttctttggatacaaa
gtcctgcaattcatatctggcaagaagaaaggggtaatggtcagtgctccatatcagaag
aacggatctggtggaatctgtagatgtgctctagacagaacagactgtacagactgttac
actcctcaagaaactgacacaatcaagtacattggactgtctatggctggacaatctact
tctcctccaacattcactgcctgcagccctggtctggcacacgagtgtgatgggaactcc
tatctgaacagtatctgttatcagttcaacagccagctccagatcacctcgaacttcaca
cctgccttccaagaatgtactaagaaaatagtcgacctcgttttcctctttgacggatca
ggaagcatgacaacggaggaatttgataagaacaaaggtttcataaacaatatcatgaca
accctaaaaaactcctcaatcaagtttgcagcggttcagttctcatcaatagccaggaca
gttttcaacttcaatgactaccaagaggggagagccttgactaatctttggaaagaaaag
cacatgtctagtctaaccaacacacatcaggcgatagactttcttttgaaaaacattttt
gaaaaccaagccgccggcgccaccgcagatgcaactaaagtactggtcataataacagat
ggagagcccagtgatactgataaaaggtttaactctatcaacagaagtgatgacaaaaac
atcatccgtttcgttattggggtcaagaatgtcgatttgacgaaactaaagtcactagca
tcagagccaaaagagaacaacactttcctcatccaggactacaacggactaaaaggaatc
ctagacaacttacaaaaaaagatcttcaacattgaaggttccaagactgctctggctgga
aacttgacgaaagagatgtctcagagtgggttcagtgctgtctacgttaataaggacacc
ttggttttgggctcagtgggatcaaacaactggcgtggatccctctttgagactgagggt
cagagatcagaggaaagggaaattcaggaccccacattggacaaagactcctatatggga
tactctgtagctgttgggaagaagaacgagaaccttctatattttaccggagcaccaaga
tctgaacacatgggacggatcctacttttcaacaaggttaacaacaactggactgtggca
caaagattgtctggagaacagatgggctcctactttggggcagagctgtgttctgtggac
atagactcagacggcaacacagacttcctcctggtgggtgcaccaatgtttcaccaacca
ccgagagagggcaggatctacgtctacacactgactgataagcaggaactgaggatggag
atgaatgtttcagtgatggcacagggtagattcggctcctccatctcctctctcacagac
ctgaatggagatgggctgaaggatgtagctgtgggcgctccacttgaagatgatcacagg
ggggctgtgtacatctacctgggtgaaaagctaaaggggatccgccctgaattcagccag
cgcatctcagctgcgatgatgagatctaagctccagttctttggccagacgattgatggg
aagatggacctgggtgaggatggactgactgacatcgtagtaggaacgcgtggcgcagtt
gtcgtcttgaggtccagaccggtcctcagcatctctgctcatctccacttccatccctcg
gagatcagcactgataactttgactgtctggcaaaagagaccatttcccctgtggtgact
ttgacagcctgctttaacatggcagaggcaacaaagagtaaagctggggcgctgagtgca
gggatgaacgtctcctacacgctggatgtggatccagtgagacagaggagccgagccttt
tacaatgacacgaacaaaggagccagaagacttctctctactgtggagctgagaaaggag
cggacctgcttcaaccactcagtctacatgacacaatgcgtaattgacacattatcgccc
ataatcatccaacttaatttttctcaatctcaaagccaacaagagggttgtactgccatt
ctgaatactgacagtcctacaaaggctgtggttgaggtgccctttgaaaagaactgcaaa
gaaaatgaagcctgtttggcagagcttgaggtggacttcaacttcatcacatcaacttta
ttagtggtggaccagagttactttaatgtgactataagactgtccaatcacggggatgac
tcctataacaccagtctaaccctcctctaccctcctggcctctcattctccacgatgcat
cttctgaagtctacaaggagaacggtgttcagctgtggtggtctggaaggtgaaatggac
agaactacatgcagtgtcagcatacctgtctaccgtagtaaaactaccgcagtgttcacc
agtaaattccatattttgaatacatacaactggaacgacacaatggaaatgaccgtcatt
ggcctgagcgacaatggaaactcaaccaatagttccctaacccggaccatccctgttcaa
tttgcagttgacctggtagcaaaagcccttccccaagactccaccacttacatgaacttt
actctggaggacacatcacctaaaagactggtgaatgtatatgaggtgcagaacttggga
tttaagtctgtaccagtcacagtcacattcactttcccaactaagcttgagcacagattt
gaaatgaaggactacgaaatatctgtcttacagaaccacactcaatgtggaaaggttatc
aattcaacaacagagtactgctctccagaaaaatactgcaagtccatcgagtgtgaaagt
ttccttttggagaagtttttgacagttacatttgtgctgtctggaaatgtttccttcaag
gacctcgatcaacatgcaaagagcttgtcattgccaaagaaattcactggggacagagaa
acagtcaacttcatcagtttagtcaaactcagctatgacaaaaaacgatatgcccagaca
gcgagtgacccaggggataactctacaggcttccaccaaacacagattgatgtccaggct
gagatcatcattcatccacaaagagagctgatactagggacaggagttggagtaggactc
tttctcctgctcatcgtcacaatggccatgtataagatgggatgcttccagagaaaaagc
cctgattatgacgagaatgagggggaatag
DBGET
integrated database retrieval system
