Oncorhynchus nerka (sockeye salmon): 115142567
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Entry
115142567 CDS
T07952
Name
(RefSeq) LOW QUALITY PROTEIN: integrin alpha-X-like
KO
K05718
integrin alpha L
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04514
Cell adhesion molecule (CAM) interaction
one04517
IgSF CAM signaling
one04518
Integrin signaling
one04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
115142567
04517 IgSF CAM signaling
115142567
04518 Integrin signaling
115142567
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
115142567
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
one04147
]
115142567
04515 Cell adhesion molecules [BR:
one04515
]
115142567
04090 CD molecules [BR:
one04090
]
115142567
Exosome [BR:
one04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
115142567
Cell adhesion molecules [BR:
one04515
]
Integrins
Integrin alpha subunits
115142567
CD molecules [BR:
one04090
]
Proteins
115142567
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
FG-GAP
Integrin_A_Ig_1
ITGAX-like_Ig_3
Integrin_A_Ig_2
VWA_2
FG-GAP_3
Copine
GDU_TM
vWA_Rv0959
Motif
Other DBs
NCBI-GeneID:
115142567
NCBI-ProteinID:
XP_029537978
LinkDB
All DBs
Position
LG15:complement(7035935..7059131)
Genome browser
AA seq
1179 aa
AA seq
DB search
MKQTPKSTRGRKKDFFGYKVLQFISGQDKGVMVSAPYQKNGSGGICRCALDRTDCTDCYT
PQETDTIKYIGLSMAGQSTSPPTFTACSPGLAHECDGNSYLNSICYQFNSQLQITSNFTP
AFQECTKKIVDLVFLFDGSGSMTTEEFDKNKGFIDNIMTTLKNSSIKFAAVQFSSIARTV
FNFNDYQEGRALTNLWKEKHMSNLTNTHQAIDFLLKNIFENQAAGATADATKVLVIITDG
DPSDTDKRFNSINRSDDKNIIRFVIGVKNVDLTKLKSLASEPKENNTFLIQDYNGLKGIL
DNLQKKIFNIEGSKTALAGNLTKEMSQSGFSAVYVNKDTLVLGSVGSNDWRGSLFETEGL
RSEEREIQDPTLDKDSYMGYSVAVGKKNENLLYFTGAPRSEHMGRILLFNKVNNNWTVAQ
SLSGEQMGSYFGAELCSVDIDSDGNTDFLLVGAPMFHQPPREGRIYVYTLTDKLELRMEM
NVSVMAQGRFGSSISSLTDLNGDGLKDVAVGAPLEDGHKGAVYIYLGEKLKGIRPEFSQR
ISAAMMRSKLQFFGQTIDGKMDLGEDGLTDIVVGTRGAVVVLRSRPVLSVSAHLHFHPSE
VSTDNFDCLAKETISPVVTLTACFNMAEATKSKAVVLSAGMNVSYTLDVDPVRQRSRAFY
NDTNKGARRLLSTVELRKERTCFNHSVYMTQCVIDTLSPIIIQLTFFQSQSQQEGCTAIL
NTDSPTKAVVEVPFEKNCKENEACLAELEVDFNFITSTLLVEDQSYFNVTIRLSNHGDDS
YNTSLTLLYPPGLSFSMMHLLKSTRRTVFSCGGLEDEMDRTTCSVSLPVYRSKTTAVFTS
KFHILNTYDWKDTMEMTVIGLSDNGNSTNSSLTRTIPVQFAVDLVAKALPQDSTTYMNFT
LEDTSPKRLVNVYEVQNLGFKSVPVTVTFTFPTKLEHRFEMKDYEISVLQNHTQCGKVIN
STTEYCSPEKYCKSIECESFLLEKFLTVTFVLSGNVSFKDLDQHAKSLSLPKKFTGDRET
VNFISLVKLSYDKKRYAQTASDPGDNSTGFHQTQIDVQAEIIIHPQIELILGTGVGVGLF
LLIIITMAMYMLGCFKRKRLVDNALEDENEGEQREQDDAVQPITEKKLEPESEPESRAVE
SNSLLDDSQTENNGFPTCEAVGEGPKEEQDVSVRSRLME
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaaaccccaaaatctacaagggggaggaaaaaggatttctttggttacaaagtc
ctgcaattcatatctggccaagacaaaggggtaatggtcagtgctccatatcagaagaac
ggatctggtggaatctgtagatgtgctctagacagaacagactgtacagactgttacact
cctcaagaaactgacacaatcaagtacattggactgtctatggctggacaatctacttct
cctccaacattcactgcctgcagccctggtctggcacacgagtgtgatgggaactcctat
ctgaacagtatctgttatcagttcaacagccagctccagatcacctcgaacttcacacct
gccttccaagaatgtactaagaaaatagtcgacctcgttttcctctttgacggatcagga
agcatgacaacggaggaatttgataagaacaaaggtttcatagacaatatcatgacaacc
ctaaaaaactcctcaatcaagtttgcagcggttcagttctcatcaatagccaggacagtt
ttcaacttcaatgactaccaagaggggagagccttgactaatctttggaaagaaaagcac
atgtctaatctaaccaacacacatcaggcgatagactttcttttgaaaaacatttttgaa
aaccaagccgccggcgccaccgcagatgcaactaaagtactggtcataataacagatgga
gatcccagtgatactgataaaaggtttaactctatcaacagaagtgatgacaaaaacatc
atccgtttcgttattggggtcaagaatgtcgatttgacgaaactaaagtcactagcatca
gagccaaaagagaacaacactttcctcatccaggactacaacggactaaaaggaatccta
gacaacttacaaaaaaagatcttcaacattgaaggttccaagactgctctggctggaaac
ttgacgaaagagatgtctcagagtgggttcagtgctgtctacgttaataaggataccttg
gttctgggctcagtggggtcaaacgactggcgtggatctctctttgagactgagggtctg
agatccgaggaaagggaaattcaggaccccacattggacaaagattcctatatgggatac
tctgtagctgttgggaagaagaacgagaaccttctatattttaccggagcaccaagatct
gaacacatgggacggatcctacttttcaacaaggttaacaacaactggactgtggcacaa
agcttgtctggagaacagatgggctcctactttggggcagagctgtgttctgtggacata
gactcagacggcaacacagacttcctcctggtgggtgcaccaatgtttcaccaaccaccg
agagagggcaggatctacgtctacacactgactgataagctggaactgaggatggagatg
aatgtttcagtgatggcacagggtagattcggctcctccatctcctctctcacagacctg
aatggagatgggctgaaggatgtagctgtgggcgctccacttgaggacggtcacaagggg
gccgtgtacatctacctgggtgaaaagctaaaggggatccgccctgaattcagccagcgc
atctcagctgcgatgatgagatctaagctccagttctttggccagacgattgatgggaag
atggacctgggtgaggatggactgactgatatcgtagtaggaacgcgtggcgcagttgtc
gtcttgaggtcccgaccggtcctcagcgtctctgctcatctccacttccatccctcggag
gtcagcactgataactttgactgtctggcaaaagagaccatttcccctgtggtgactctg
acagcctgctttaacatggcagaggcaacaaagagtaaagctgtggtgctgagtgcaggg
atgaacgtctcctacacgctggatgtggatccagtgagacagaggagccgggccttttac
aatgacacgaacaaaggagccagaagacttctctctactgtggagctgagaaaggagcgg
acctgcttcaaccactcagtctacatgacacaatgcgtgattgacacattatcgcccata
atcatccaacttacattttttcaatctcaaagccaacaagagggttgtactgccattctg
aatactgacagtcctacaaaggctgtggttgaggtgccctttgaaaagaactgcaaagaa
aatgaagcctgtttggcagagcttgaggtggacttcaacttcatcacatcaactttatta
gtggaggaccagagttactttaatgtgactataagactgtccaatcacggggatgactcc
tataacaccagtctaaccctcctctaccctcctggcctctcattctccatgatgcatctt
ctgaagtccacaaggagaacggtgttcagctgtggtggtctggaagatgaaatggacaga
actacatgcagtgtcagcctccctgtctaccgtagtaaaactacagctgtgttcaccagt
aaattccatattttgaatacatacgactggaaggacacaatggagatgaccgtcattgga
ctgagcgacaatggaaactcaaccaatagttccctaacccggaccatccctgttcaattt
gcagttgacctggtagcaaaagcccttccccaagactccaccacttacatgaactttact
ctggaggacacatcacctaaaagactggtgaatgtatatgaggtgcagaacttgggattt
aagtctgtaccagtcacagtcaccttcactttcccaactaagcttgagcacagatttgaa
atgaaggactacgaaatatctgtcttacagaaccacactcaatgtggaaaggttatcaat
tcaacaacagagtactgctctccagaaaaatactgcaagtccatcgagtgtgaaagtttc
cttttggagaagtttttgacagttacatttgtgctgtctggaaatgtttccttcaaggac
ctcgatcaacatgcaaagagcttgtcattgccaaagaaattcactggggacagagaaaca
gtcaacttcatcagtttagtcaaactcagctatgacaaaaaacgatatgcccagacagcg
agtgacccaggggataactctacaggcttccaccaaacacagattgatgtccaggctgag
atcatcattcatccacaaatagagctgatactagggacaggagttggagtaggactcttt
ctcctgatcatcatcacaatggccatgtatatgctgggatgtttcaagagaaaaaggctt
gttgataatgcactggaagatgagaatgaaggggaacagagggagcaagatgacgctgtt
cagcctataacagagaaaaagctagagcctgagagtgagcctgagagtagagcagtggag
tcaaattctctccttgacgacagtcaaacagaaaacaatggcttccccacttgtgaggcg
gtaggggagggaccaaaagaagaacaggatgtgtcagtcagaagcaggctgatggagtag
DBGET
integrated database retrieval system
