Oncorhynchus nerka (sockeye salmon): 115142578
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Entry
115142578 CDS
T07952
Name
(RefSeq) THO complex subunit 4-like
KO
K12881
THO complex subunit 4
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03013
Nucleocytoplasmic transport
one03015
mRNA surveillance pathway
one03040
Spliceosome
one05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115142578
09122 Translation
03013 Nucleocytoplasmic transport
115142578
03015 mRNA surveillance pathway
115142578
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
115142578
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
one03019
]
115142578
03041 Spliceosome [BR:
one03041
]
115142578
Messenger RNA biogenesis [BR:
one03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
115142578
TREX complex
115142578
Spliceosome [BR:
one03041
]
Complex C
Other components
EJC/TREX
115142578
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
115142578
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
Motif
Other DBs
NCBI-GeneID:
115142578
NCBI-ProteinID:
XP_029537998
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All DBs
Position
LG15:complement(7142871..7145805)
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AA seq
273 aa
AA seq
DB search
MADKMDMSLDDIIQQSKKGGGGRGNRGGRSRGSSGRGGSGGRPGGAASGGRTGGSGPMRS
RQNFSGDRSDSRPTPYSRPRELPDKWQHDMFEGGFGSNAGGGGGAGGGGVETGGKLLVSN
LDFGVSDADIQELFAEFGTLKKAAVHYDRSGRSQGTADVHFERRADALKAMKQYNNVPLD
GRAMSIQHVTSQIRDDNQRRPSQSSNGGSGGFNRDRIGRPNFSDRRGGGDRRAGRGSRGR
GRGGRGGGGKPQQLSAEELDAQLDAYNAKMETS
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atggctgataagatggatatgtctttggacgacattattcaacaaagtaagaaaggcgga
ggtggccgcggaaatcgaggaggccgcagccgaggatcatcgggtcgaggtgggagtgga
ggccgacccggtggagctgcctctggaggccggaccggcggatccgggcccatgaggagt
cgacagaacttcagtggagacagaagcgacagcagacccacgccatacagcaggcccaga
gagctgccggacaaatggcaacacgacatgttcgaaggtggcttcggcagtaatgctggc
ggtggtgggggagcaggaggtggcggtgtggagactggtggcaagctccttgtctcaaac
cttgacttcggtgtgtctgacgctgatatccaggagttgtttgcggaattcggtacgttg
aagaaagcggctgtgcactatgaccggtctggccgcagccagggaaccgctgacgtccac
tttgagaggagggctgatgcactcaaagccatgaaacagtacaacaatgtaccactcgat
ggccgcgccatgagcattcagcatgtcacgtcacaaattcgagacgataaccagagacga
ccatcacagagttcaaacggaggcagtggtggattcaacagagacagaattggacgcccc
aatttctcagacaggcggggaggtggagacaggcgggccggcagaggctccagggggagg
ggtagaggcggacgtggtggtggaggcaaaccgcagcagttgtctgctgaagagctggat
gcccagttggatgcttacaatgctaagatggagaccagttag
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integrated database retrieval system