Oncorhynchus nerka (sockeye salmon): 115142642
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Entry
115142642 CDS
T07952
Name
(RefSeq) protein jagged-1b-like isoform X1
KO
K06052
jagged-1
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04330
Notch signaling pathway
one04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
115142642
04371 Apelin signaling pathway
115142642
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
one04090
]
115142642
CD molecules [BR:
one04090
]
Proteins
115142642
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
MNNL
EGF_TEN
JAG1
DSL
EGF_2
EGF_DL_JAG
JAG1-like_EGF2
EGF_Teneurin
EGF_CA
EGF_3
DAG1
CD34_antigen
Motif
Other DBs
NCBI-GeneID:
115142642
NCBI-ProteinID:
XP_029538107
LinkDB
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Position
LG15:complement(9543574..9573222)
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AA seq
1245 aa
AA seq
DB search
MILRLSSICVAFSIHVFLQSMWIKVAVASGHFELQIVSMQNVNGELQTGVCCDGSRNAAD
RKCTRDECDTYFKVCLKEYQLKVSSAGPCSFGTASTPVVGGNTFSLRSMRSDKSRIVLPF
SFAWPRSYTLIVEALDFNNDSSTGSGGGEMIEKAVQSGMINPSRQWQSLKHNGPVGQFEY
QIRVSCDEHYYGFGCNKFCRPRDDFFGHYNCDHNGNKTCLEGWSGLECSTAICRQGCSTE
HGSCKLPGDCKCLYGWQGEYCDKCIPHPGCVHGTCVEPWQCLCDTNFGGQLCDKDLNTCG
TFQPCLNMGTCSNTGPDKYHCACPDGYSGVNCEKAEHACLSEPCFNGGRCVETSQGFECQ
CSPGWSGPSCSINVDECFPNPCGHGGTCQDQVNGFKCTCPSQWSGKTCLIDANECEGDPC
LNANSCRNLIGGYFCECLPGWMGQNCETNINDCQDQCQNGGKCKDMVNGYRCVCPSGFGG
EHCEKDVDECASGPCLNGGRCKDDVNGFQCLCLPGFSGNFCQLDIDYCMPSPCQNRAQCF
NLATDYFCKCPEDYEGKNCSHLKDHCRTTPCKVIDSCTVSVASNSTPGGVRLISSNVCGP
HGRCRSQAGGQFSCECQEGFTGTYCHENINDCESGPCQNGGTCIDKVSLYQCICAEGWEG
PNCDDNIDDCNTNPCRNRGTCRDLVNDFYCECKNGWKGKTCHSRESQCDEATCNNGGTCY
DEGDTFKCMCAAGWEGATCNIAKNSSCLPSPCENGGTCVVSGDSFTCVCKEGWDGLTCNQ
NSNDCNPHPCYNSGTCVDGDNWYRCECAAGFAGPDCRININECQSSPCAFGSTCVDEING
YRCLCPPGRAGPRCQEVTVRPCVVNSLVAGDGTKWDDDCNTCQCHNGKVTCTKIWCGPKS
CRVHSKSHSDGECPVGQTCVPVRDERCFVKPCPSQGECWSASHSLPPHAKCHPESNCANV
TFTFNKDTMPQGLTVEHICGELRSLYVVRNLSSEYSVSMTCEPSATTNNEINVAISTEDP
RRGKAPIKEITDKFIDLVSKRNGNSTIITAIVEVRVQRRQTHNPNADYLVPLLVSVVIVI
WLLAVASAFIWCLKRRRKPSTHTGVSTQSTSPATTAEDTNNAVNNVREQLNQIKNPIDKH
GPTNGLPPVKEHPNHYHYEDKNSLTNAKIRTNNSDVGSHHSDDEESEKRLQKARFPRQTP
YTLVDREERSPQPLSTAGKHPNWTNKQDNRDLESTQSLNRMEFIV
NT seq
3738 nt
NT seq
+upstream
nt +downstream
nt
atgattttgagactgagttcaatctgtgttgccttttctattcatgtcttcttgcaatcc
atgtggattaaggtggctgtggcatctggacacttcgaattgcaaattgtatcgatgcag
aacgtgaatggcgaactgcagactggcgtgtgctgcgatggatctcggaatgccgcggat
cgcaagtgcacgagggacgagtgtgatacctattttaaagtgtgtctaaaggagtaccag
ttgaaggtctcttcggcgggaccatgcagtttcgggacggcgtctacacccgtggtcgga
gggaatactttttctttgcggagcatgaggagtgacaagtcgaggattgtattacctttc
agctttgcttggccgaggtcctatacattgatcgtggaggccttggacttcaacaatgac
tcttctacgggcagtgggggaggcgagatgatcgagaaggccgttcagtcgggcatgatc
aaccccagccgccagtggcagagcctgaagcacaacgggccggtgggccagttcgagtac
cagatccgggtcagctgcgacgagcattactacggtttcggctgcaacaagttctgccgt
ccgcgcgacgacttttttggccactacaactgcgaccacaacggcaacaagacctgcctc
gaagggtggtccggactagaatgcagcactgctatttgcaggcaaggctgcagcactgaa
catggttcctgtaaattgcccggagattgcaagtgtctgtacggctggcagggcgagtac
tgtgataagtgcattcctcacccgggctgtgtgcacggaacctgcgtggaaccgtggcag
tgcctctgtgacacaaactttggcggccagctctgcgacaaagacctgaacacatgtggt
acgttccagccctgtttgaacatggggacgtgcagcaacactggacctgacaagtaccac
tgtgcctgtcctgacggctactctggtgtcaactgcgaaaaagcagagcatgcttgtctg
tcggagccctgttttaacggagggagatgtgtggagaccagtcagggcttcgagtgccag
tgttcccccggctggagtggcccttcctgcagcatcaatgtggacgagtgtttccccaac
ccctgtggccacgggggcacctgccaggaccaggtcaacggcttcaagtgcacctgtccc
tcccagtggagcggcaagacctgcctcattgacgccaatgagtgcgaaggcgacccctgc
ctgaatgccaactcctgccgcaacctgattggagggtacttctgcgagtgcctccctggt
tggatgggccagaactgcgaaaccaatatcaatgactgccaggaccagtgtcaaaatggg
ggaaaatgcaaggacatggtgaatgggtaccgttgcgtttgtccgtcgggcttcggcggc
gagcactgcgagaaggacgtagacgagtgcgccagtggcccgtgcttgaacggtggccgt
tgcaaggacgacgtcaatggcttccagtgcctgtgcctgcccggtttctctggcaacttc
tgtcagttggatatcgactactgcatgccgagcccatgtcaaaacagggcccagtgtttc
aacctggctaccgattacttctgcaaatgtccagaagactacgagggcaagaactgttcc
catttgaaggaccactgtcggacaacaccatgcaaagtgattgacagctgcacggtttcc
gtggcatccaacagcacccctgggggcgtgcgtctgatttcgtccaacgtgtgcgggccc
cacgggcgctgccggagccaggctgggggccagttcagctgcgagtgccaggagggcttc
accgggacatactgccatgagaatataaatgactgtgaaagtggcccgtgtcagaacggg
ggaacgtgtattgacaaagtcagcctgtaccagtgcatctgtgccgagggctgggaggga
cccaactgtgacgacaacattgacgactgcaacaccaacccatgtcgcaaccgcggcacg
tgccgagacctggtgaacgacttctactgcgagtgtaagaacggatggaagggcaagaca
tgtcactcaagagagagccagtgtgacgaggctacgtgcaacaatggcggaacgtgctac
gatgaaggggacaccttcaaatgcatgtgtgccgccggatgggagggtgccacctgtaat
atagctaagaacagcagctgtctgcctagtccttgtgagaacggaggcacctgtgtagtc
agtggagactctttcacctgcgtctgcaaagagggctgggatggcctgacctgcaaccaa
aattccaacgactgcaatccccacccttgctataacagtggaacctgtgtggatggagat
aactggtaccggtgtgagtgtgccgcgggatttgccggaccagactgccggattaacatc
aacgagtgccagtcgtcgccctgcgcgttcggctccacctgcgtagatgagatcaacggc
taccgctgcctgtgtccaccagggagggccggccccaggtgccaagaagttactgtgaga
ccctgtgttgtcaacagtctagtggctggggatgggaccaaatgggatgacgattgcaac
acctgccagtgccacaatgggaaggtcacctgtacaaagatctggtgcggtcccaaatcc
tgccgggtccacagtaaaagtcacagcgatggcgagtgcccagttggtcagacgtgtgtg
cccgtcagggacgagcgctgtttcgtcaagccatgtcccagccagggcgagtgctggtcg
gcctcccacagtctcccgccccatgcgaagtgccaccccgagagcaactgtgccaacgtc
accttcaccttcaacaaggacaccatgccacagggcttgactgttgagcacatctgcggt
gagctaaggagtctgtatgtggtgaggaacctctcgtcagagtactctgtgtccatgaca
tgcgagccatcggccaccaccaacaacgagatcaatgtagccatttcaacggaggacccc
agacgaggcaaggcccctatcaaggagatcacagacaaattcatagacctggtcagcaag
cgaaacggaaacagcactatcatcacagccattgttgaagtccgtgtccagaggaggcag
acccacaaccccaatgcagactacttggtccccctgctggtgtccgtagtcatcgtcatc
tggctcctggctgtggcatctgcgtttatctggtgcctcaagcggcgccggaagcccagc
acccacacgggtgtcagcacccagtcgacgtcccctgcgacgaccgccgaagacaccaac
aacgcagtcaacaacgtgcgtgagcagctcaaccagatcaagaaccccatcgataaacac
ggtccgaccaacggcctacccccagttaaagaacaccccaaccactatcactacgaggac
aagaactctcttaccaacgccaaaattagaacaaacaactcagacgtaggtagccaccat
tcggatgacgaggagtctgagaagaggcttcagaaggctaggttccccaggcagacgccg
tatactctagtggaccgggaagagcggagcccacagccactcagcacggccggcaaacac
cccaactggactaacaaacaggataacagagacttggagtcgacgcagagcttaaaccga
atggaattcattgtatag
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