Oncorhynchus nerka (sockeye salmon): 115142653
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Entry
115142653 CDS
T07952
Symbol
pex6
Name
(RefSeq) peroxisome biogenesis factor 6
KO
K13339
peroxin-6
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
one00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
115142653 (pex6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115142653 (pex6)
Membrane trafficking [BR:
one04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
115142653 (pex6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
AAA_16
AAA_33
AAA_22
ABC_tran
AAA_5
DUF815
RuvB_N
nSTAND3
TIP49
Mg_chelatase
RNA_helicase
TsaE
AAA_7
AAA_25
AAA_24
Vps4_C
NPHP3_N
AAA_28
IstB_IS21
AAA_14
AAA_2
Parvo_NS1
AAA_17
PhoH
Wza_C
Motif
Other DBs
NCBI-GeneID:
115142653
NCBI-ProteinID:
XP_029538133
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All DBs
Position
LG15:complement(10494740..10510423)
Genome browser
AA seq
1089 aa
AA seq
DB search
MAAQVELSCLDTFPTHLNPLHVLVIKSQFRYAFPSCNEPTSTLLFTSRKLQTLGKTAVLL
CAHSTEETSGWGSDGNDTTLKLYTSKIFLKHYGLQDDIRGVVRSLSPFSLRKVVIGARTR
QSFKWANSDKFSNGLLVLASCQGQPLLARQGDSLSLPYHPLLGDDISQVQHSLFDLVVLE
CTPITQGMITINTTVVVTDCRDIAQHGALETSNALATRNLTSLFVSDFAHYANSLGGGSS
LLDNRQVLDSSLSAFLQALECRLDVRIVDIRRLYCQGRIVLVEKRDAKIDLDSTVFVSKQ
LLLKLGLFNREWVVVSRFNCSSEMTKTSYRGESLPSPGQADDNAPGKEPSKGTEMVHLGS
VVVADFSKCAELDLQDNVGFISPTHWFNLSNGEPVPVSSRAVKIKRWNRVVSQSGLQLSE
SLSRSASPLLAKELHIDVVISPEYSSHGPFDSILCEHFTIPRLVQLGGVLGIPSEGHPEV
LESNSEGITRWPVVYFKVKKVCGSTEEEDQGPYLADTVHTSLYMGGSTNSLAPCSLVGEE
PSLWTSLSPPGLSSTVDQFSTIIQPHMNESSAALMSGCTILLLGPSGSGKFTSVRAACRR
LHLHLVKVDCVTLCADTAASCEAKMKSVFQRAEAHRPCILLLRNLQLLGQPRDGAEEDAR
VIAALCQFIAHAPASVVVVAAVSKPRELSSDVMAAFIHQVSIESPSEEQRRAMLASLSEG
MPLGRDVNLARLAKHTAGFLLGDLSALLTQAGKSAHARILQSCFPEGASVQEEEDLCACG
VTVLAQDFTNALETLQDAHSQAIGAPKIPSVRWQDVGGLQQVKREILDTVQLPLERPELL
SLGLRRAGLLLYGPPGTGKTLLAKAVATECSMTFLSVKGPELINMYVGQSEENVREVFSK
ARAAAPCIIFFDELDSLAPNRGRSGDSGGVMDRVVSQLLAELDGLHSSGDVFVIGATNRP
DLLDQSLLRPGRFDKLVYVGINEDKESQLQVLKAIVRKFKVDPSVSLQDIVERCPPQLTG
ADIYALCSDAMMSAIKRKIARVTDGLDTEDTPLILSAEDFNQALDCHKPSVSEQELLKYK
LIQQKLTAK
NT seq
3270 nt
NT seq
+upstream
nt +downstream
nt
atggcagctcaggtagaactgtcatgtttagatacatttccaacgcacttaaatccttta
cacgtgcttgttatcaagtcacaatttagatatgcgtttccaagttgcaatgagcctact
tcgacccttttattcacctcacggaagcttcagacactcgggaaaactgccgttttgctc
tgcgcgcactcaacagaggagacgtcaggttggggatcggatggaaacgacacaacttta
aaactgtacacaagtaagatctttctcaaacactatggtctccaggatgatataagggga
gttgtacgctcactgtcaccgttttcccttagaaaagttgtaataggggcacgaacaaga
cagagtttcaagtgggcaaactcggataagttttccaatggacttctcgtactggcttcg
tgccaaggtcaaccactattggcacgacaaggggactcgctatcacttccctatcaccct
ttacttggagatgatatatctcaagtgcaacactctctgttcgacttagttgtgttggag
tgtacacctataacgcaggggatgataacaatcaacacaacagtggtggtcaccgactgc
agagacattgcgcaacatggtgcactggagacctcgaatgctttggctactagaaatttg
acctcgctatttgtctctgattttgcacactacgcgaatagtcttggcgggggaagctct
ttacttgacaacaggcaagtattggactcgagtttatccgcttttttgcaagcactggag
tgtaggctggatgtcagaatcgtggatattcgtcgcttgtactgtcaagggagaattgta
ctagtggagaagcgcgatgctaaaatcgatttagacagtactgttttcgtaagcaaacag
ttgctgctcaaactcgggttattcaaccgtgagtgggtagtggtgtctaggtttaactgc
tcatcagaaatgacaaagacgtcctacagaggcgagtccctgccaagtcccgggcaagcc
gatgataacgcacctggcaaagagccatctaagggcaccgaaatggtccacctcggatcg
gttgttgtggcagatttcagcaagtgtgcagagttggaccttcaagacaacgttggcttc
atatcgccgactcattggttcaacttgtcgaacggagagccagtgccagtcagtagcaga
gctgtgaaaataaagagatggaaccgggtcgtttctcagtcaggtcttcagctttctgag
agcctctctcgatcagcatcaccgctgttagccaaagaactccacattgatgttgtcatc
tccccagaatacagttctcatggtccctttgacagtatcctctgtgagcactttaccata
ccaagacttgtgcagctgggcggtgttttgggcatcccatctgaagggcatcctgaagtc
ttggagagcaactctgagggaatcacaaggtggccggttgtgtatttcaaagtgaaaaag
gtttgtggctctacagaggaggaagaccaaggtccttaccttgcagacactgttcacaca
tctctctacatgggcggctccaccaatagtctggctccctgttcccttgttggcgaggag
ccttccctctggactagcctgtctccccctgggctctccagcaccgtggaccaattctcc
actatcatccagccccacatgaatgaaagctctgctgctctgatgagcggctgcaccatc
ctcctcctgggaccgagtggcagtggaaaattcacctctgtcagagctgcatgccgtaga
ctccatctgcacttagttaaggtggactgcgtgaccctctgcgccgacacggccgcctcc
tgtgaggcgaagatgaagtctgtcttccagcgagctgaggcccaccggccgtgcatcctg
ctgctcaggaacctgcagttgctgggccagcccagggatggcgccgaggaggatgccagg
gtcatagccgccctgtgccagttcattgcccacgcccctgccagcgtggttgtggtggcg
gcggtaagtaaaccccgggagctgtcgtctgacgtgatggcagcctttatccaccaggtg
tcgatagagagccccagtgaggagcagcgccgggccatgctggccagcctcagcgagggc
atgcccctgggaagggacgtcaacctggccaggctggccaagcacactgcgggctttcta
ttgggggacctcagtgcactgctgactcaggctggtaaatctgctcacgcaagaatactc
caatcctgtttcccagagggggccagtgtgcaggaggaagaggacctatgtgcctgtggg
gtaaccgtcctggcccaggacttcaccaatgccttggagaccctccaagacgcccactct
caggccatcggagccccgaagatccccagtgtgcgctggcaggacgttggcggcctgcag
caggtgaagcgggagatcctggacacggtgcagctgcccctggagaggcccgagctgctg
tccctgggcctgcgccgcgccggcctgctcctctacgggcctcccggcacgggcaagacc
ctgctggccaaggctgtggctacagagtgctccatgaccttcctcagtgtcaaaggcccg
gaactcatcaacatgtacgtgggtcaaagcgaggagaatgtgagagaggttttctccaaa
gctcgagcggcggccccttgtatcatcttctttgacgagctggactctctagcgcccaac
agagggcgcagtggagactctggtggagtcatggacagggtggtctctcagctcctggct
gagcttgacggacttcactcctctggggacgtgtttgtgattggagccaccaaccggcca
gacctgctcgatcaatcattgctcagacctggcaggtttgacaaattggtgtatgttggg
atcaatgaagacaaagagtctcagctgcaagttctgaaggccatagtcagaaagttcaag
gtggaccccagcgtcagtctccaggatatagtggaacgctgccctcctcagctcaccggg
gcggacatatatgctctctgctccgacgccatgatgtctgccattaagaggaagattgca
cgtgtcaccgacggtctggacaccgaggatactcctctcatactctctgccgaagacttt
aaccaagcattggattgccacaaaccgtccgtctctgaacaagagctgctcaaatataaa
ctcattcagcagaaactcactgcaaaataa
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