KEGG   Oncorhynchus nerka (sockeye salmon): 115142698
Entry
115142698         CDS       T07952                                 
Name
(RefSeq) calpain-1 catalytic subunit-like
  KO
K01367  calpain-1 [EC:3.4.22.52]
Organism
one  Oncorhynchus nerka (sockeye salmon)
Pathway
one04141  Protein processing in endoplasmic reticulum
one04210  Apoptosis
one04217  Necroptosis
one04218  Cellular senescence
one04382  Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:one00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    115142698
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    115142698
   04217 Necroptosis
    115142698
   04218 Cellular senescence
    115142698
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    115142698
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:one01002]
    115142698
Enzymes [BR:one01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.22  Cysteine endopeptidases
    3.4.22.52  calpain-1
     115142698
Peptidases and inhibitors [BR:one01002]
 Cysteine peptidases
  Family C2: calpain family
   115142698
SSDB
Motif
Pfam: Peptidase_C2 Calpain_III EF-hand_6 EF-hand_1 CAPN13-like_C_EFh
Other DBs
NCBI-GeneID: 115142698
NCBI-ProteinID: XP_029538211
LinkDB
Position
LG15:12113124..12138177
AA seq 704 aa
MYPFGGVSARIQRERLHAEGMGTNERALKFLNQDYEALKQECLESGCLFEDSCFPPEPPS
LGFKELAPHSSKTQGVEWMRPTEFSDNPEFILGGATRTDICQGALGDCWLLAAIASLTLN
EKLLHRVVPHGQSFQDNYAGIFHFQFWQFGEWVDVVIDDRLPVKDGELMFVHSAEGNEFW
SALIEKAYAKLSGSYEALSGGSTTEGFEDFTGGVAEFYELRKAPKDLYRIIGKALERGSL
LGCSIDITSAFDMEAVTFKKLVKGHAYSVTGLKQVDFRGRMERLIRIRNPWGQVEWTGAW
SDNSSEWNAIDPTEREDMNCHMEDGEFWMPFQEFLRQFSRLEICNLTADALSDDSQSFWN
TIKFDGGWRKGSTAGGCRNHPNTFWINPQYKITLLEEDDDPEDEEEACSFLVALMQKDRR
RYRRQGQDMHTIGFAIYEIPEEFKGCQSVHLKKDFFLKHSSCARSETFINLREVSARLRL
PPGEYLVVPSTFEPGKEADFVLRVFTEKQSETQELDDDVVANFEDEEDISESDIEDSFRA
MFAQLSGEDMEISVRELRTILNRVVTKHRDLKTDGFSMESCRGMVSLLDKDGSARLGIVE
FQILWNKIRKWLGIFRQFDLDKSGCMSSYEMRLALESAGFKLNNRLNQVLVARYAENEVI
DFDNFVCCLVKLEAMFKAFQALDREGAGTAEMNVTEWLYMTMCG
NT seq 2115 nt   +upstreamnt  +downstreamnt
atgtacccattcggaggggtctcagcgcgcatccagagggagagactacacgcagaggga
atgggaaccaacgagcgggcgctgaagttcctcaaccaggactacgaggccttgaagcag
gagtgcctggagagcggctgcctgttcgaggactcctgcttcccccccgagccaccctcc
ctgggcttcaaagagctggccccccactcatccaaaacccagggcgtggagtggatgagg
cccacagagttttcagataaccctgagttcattttgggcggcgccacaaggactgatatc
tgtcaaggagcactgggtgactgctggctcctggcagccattgcttccctcacccttaat
gagaagctgctacacagggtggtccctcatggtcaatccttccaagacaactacgctggc
atcttccacttccagttctggcagtttggagagtgggtggatgttgtcattgatgatcga
ctgcctgtcaaagatggcgagctcatgtttgttcactctgctgagggtaacgagttctgg
agtgccctgattgagaaggcttatgccaaactgagtggctcctatgaggccttgtctggt
ggcagcaccacagagggctttgaggacttcaccggtggcgtggcagagttttacgagcta
cgtaaggcacctaaggatctgtaccggatcatcggtaaagccctggagagaggttccctt
ctgggctgctccattgacatcaccagtgccttcgacatggaggcagtgacctttaagaag
ctggttaaaggccatgcctactctgtcacaggtctgaagcaggtggatttccggggtcgc
atggagaggttgatccgtattcgtaacccctggggtcaggtggagtggaccggggcttgg
agtgataattcgtctgagtggaatgcgattgatccaacagagagggaggacatgaattgt
cacatggaggacggggagttctggatgcccttccaggagttcctgcgccagttttcccgg
ctggagatctgtaacctgacagcagatgctctgagtgatgacagccagagtttctggaac
accatcaagtttgacggaggctggaggaagggcagcacggctggaggctgccggaaccac
ccaaacaccttttggatcaacccccagtataagattaccctgctggaggaggacgacgac
cctgaggatgaagaggaggcctgcagcttcttggtggctctcatgcagaaggataggcgc
cgctaccgacgccaggggcaggacatgcacaccattggctttgccatctacgagattcca
gaagagtttaagggttgtcaaagtgttcatttgaagaaagacttcttcttgaagcactca
tcatgtgcacgttctgagacctttatcaacctgagggaggtgagcgcacggctgcgcctg
ccacccggggagtacctggtggtaccctccaccttcgaacctgggaaagaggctgacttt
gtcctcagagtcttcactgagaagcagtcagagacacaagaactggatgatgatgtggtg
gcaaactttgaagatgaggaggacatctcagagagtgacattgaggactcattcagggcc
atgttcgctcagttatctggggaggacatggagatctctgtccgtgagctcaggaccatt
cttaatagggtcgtgaccaaacacagggacctgaagactgatgggttcagcatggagtcc
tgtagaggcatggtcagcctattagacaaagatggcagcgctcgccttggtatagttgag
tttcagattctgtggaataagatcaggaagtggctgggaatcttccgccagtttgatctg
gacaagtctggatgtatgagctcctatgagatgcgtctggccttggagtctgctggattc
aaactgaacaacaggctgaaccaggtgcttgtggccagatacgctgaaaacgaggtcatc
gactttgataactttgtctgctgtctggtcaagctagaagccatgttcaaggccttccag
gcgttggatagagaaggtgctggaactgctgaaatgaatgtcacagagtggctgtatatg
accatgtgtggttga

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