KEGG   Oncorhynchus nerka (sockeye salmon): 115142746
Entry
115142746         CDS       T07952                                 
Name
(RefSeq) ubiquitin-associated protein 2-like isoform X1
  KO
K26545  ubiquitin-associated protein 2
Organism
one  Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:one00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:one04121]
    115142746
   03400 DNA repair and recombination proteins [BR:one03400]
    115142746
Ubiquitin system [BR:one04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Multi subunit type E3 associated proteins
    115142746
DNA repair and recombination proteins [BR:one03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     115142746
SSDB
Motif
Pfam: UBAP2-Lig UBA_RAD5A GIP1_N UBA_4
Other DBs
NCBI-GeneID: 115142746
NCBI-ProteinID: XP_029538282
LinkDB
Position
LG15:complement(13639360..13679895)
AA seq 1262 aa
MMTSLGGDKARGTRDKALPAATHATQPQKQLQATAEQIRLAQMIYDKNDAEFEDKVNQLM
EVTGKIQDECMVALHDCNEDVNRAINFLLESTSDTTSWETVGKKKPLAKDGPTEGKENRE
KRGGEREGSRGRGGSNRRGRGASNRSRQVERVRPEENGVEAIPGPLDRVSERGRRGGRGG
RGECQLVALSHMFQSTLPVGSGGRGRGRAPVGSRFSAQGMGTFNPADYTPEQGTGTTQGD
AWESGANNSNSTDGTVAWRSTLEDWAAEDWSEEMSLSETKVFTASSAPAPQNHLTPGQSL
DLPSLLQKPVGEGRGGGGGDAPSTQSLVFTNSHHHPPRNGSAIGTGSTSYAHAALSSVLG
AGFGDLGQSKRSQSSPGAQILEQLKGPGLGPLPSSQAAPPPSTQGASNTSLGSRLPGLGG
AAPVLPPPSTSSWDIKVPEPSATSSSHTSHFSRDFKLQPEPSLVLSQLAQRHGAPSLPIA
RQPSPAQSPSPIQGPPLATIGAKPAHSAGPDTQGSNALQQHRVPQLKAQKRRIPPTSKIP
SSAVEMPGSADVPGLNVQFGALDFGSEAALPDFGSVETCVTGGSRESTPAPQSQTSLYSN
PLSESMSTPLSIPLPLSSSEPVYHSPSVPMPSLTPSSMGTVSSSTPSSSISSSVPSSSST
SPFVSVGSGYDCGPVAPHSHLAFSQSKEAPGPIMNGLNGVRTSAMDPSSASSTPKPESPS
LSISTSSAPAPCALMPSSIPSQSSALPSLPHDMPSASLAPLSSHGSSSHSSLTYTSVDSS
VSSLAPSSGSYSSAPAQAPAQSLHQVNSGMAHIMGTMSHMNSMVSSMGGSGHHASQALGL
SANGTTAQANLSSAPRTAPLLSSSTGKAPPNLSQGVPPLLPNQYIMGPGGLLPAYPQIYG
YEDLHMLQSRLPMPSLQDYYGITFPGPAALSGRDGSLANNPYSGEVTKFGRGDSTSPAPS
SLSAQQQPQQGQSQGQNQAQPQPPQPQPQGQPQGHHNSQQQQAFLPPGYSYTGLPYYPGM
PGAAFQYGHTMFMPQGQGPAKQHGVGLGNPSASPFQQQQPSGYGQHTFSSGYEDLTQGQA
GVDYSKGYSNSSQSQAKSAATGPGKGGISVTSGNSGVPEISGSVYNKTQINLITDLDFAL
QLSVSSPLISRVSMRGLPLLSTCLRLWGVLEGPRVATLPPPSSTSCSLPTSNPTLRCCTI
IWPRTDREVLASEASLAACSRRARSTSPATAAPHTGATDRAVCVHTASCPPILTCQTRGG
GL
NT seq 3789 nt   +upstreamnt  +downstreamnt
atgatgacatcgttgggcggcgacaaagcccggggcactcgggacaaagcgctgcctgct
gccacacacgcaactcaaccacagaaacagctccaggcgactgcagagcagatccgactc
gcccagatgatctatgacaagaatgatgctgagtttgaggacaaagtgaaccagctgatg
gaggtgacaggaaagatccaggatgaatgcatggtagcgctccacgactgcaacgaagat
gtcaacagagccatcaacttcctccttgagagcacctctgatacgacctcatgggagaca
gttgggaagaagaaacccctagcgaaggacggcccgacggagggcaaggagaaccgggag
aagagaggaggagagcgagagggcagcaggggccgcggagggagcaatcggagaggcagg
ggggccagcaaccgcagccgccaggttgagagagtgcggccagaggaaaatggtgtggag
gcgatccctggccctttggacagagtgtcagagcgaggtcgcaggggaggaagagggggt
agaggtgagtgtcaattagtggcactttctcatatgttccagtcaacactcccagttgga
tctggaggcagaggaaggggcagggcaccagtgggtagcaggttctcagcccagggaatg
gggacctttaacccagcagactacaccccagaacaggggacagggaccacacaaggtgac
gcttgggagtcaggggccaacaacagcaacagcacagacgggacagtggcctggaggagt
actctggaagactgggctgctgaggactggagcgaagagatgagtctctccgagaccaaa
gtgttcaccgcctcaagtgcacctgcacctcagaaccacctcacacctgggcaaagtctg
gacctgccctctctgctgcagaagccagtgggagaaggaagaggaggaggaggaggggat
gccccctctacacagagcctggttttcaccaactcccaccatcaccccccccgcaacggg
tcggccattggcacaggcagcaccagctatgcacacgccgccctgtcgtcagtgctaggg
gcaggtttcggggacctgggccagtctaagaggagtcagtccagtccgggggcccagatc
ttggagcagctgaagggcccgggcctgggtcctctcccatcctcccaggcagccccccct
cccagcactcagggggccagtaacacctctctggggagtagactcccagggctaggagga
gccgcccctgttctcccaccgccttccacttcaagctgggatatcaaggtcccagagccc
agcgccacatcctcctcacacacctcccacttcagccgggactttaagctgcagcctgag
ccatccctggtgctgagccagctggcccagagacacggcgccccctctctgcccattgct
cgccagcccagcccagcccaatctccctcccccatccagggaccccccctggccaccatc
ggtgccaagcctgcccacagcgccgggccggacactcaaggcagcaacgcgctgcagcag
caccgcgttccacagctaaaggcccagaaacgaaggatacctcccacctctaagatcccc
tcgtcggcggtggaaatgcctggctctgccgacgtccccggtcttaacgttcagttcgga
gcactggactttggctcggaggcagccctgccggactttggctccgtggagacgtgtgtc
accgggggctccagggagtccaccccggccccacagagccagaccagcctctattccaat
cccctcagtgaatctatgagcacccctctttccatccccctccctctctcatcctctgag
cccgtctaccactccccgtcggtgcccatgcccagcctgaccccctcctctatgggtaca
gtcagctcctccactccatcctcctccatctcctcctcggtgccctcctcctcttccacg
tctccctttgtctcagtggggagcggttatgactgtgggcccgtggcccctcactcacac
ctggccttctcccagagcaaagaggcacccgggccaatcatgaacggtctgaatggtgtg
aggacgtctgctatggacccttcgtcagcctcctctacgccaaagccggagtctccctct
ctgagcatcagtaccagcagtgcccctgccccctgtgccctcatgccctcctccataccc
tcccaaagctcggcactccccagtctgccacacgacatgccctctgccagcctggcacca
ctcagcagccatggcagcagtagtcattcctctctcacttataccagtgtagacagtagt
gtgagctctctggcaccctcgtctggctcctactcctctgccccagcacaggccccagcc
cagtcactccaccaggtcaacagcggcatggctcacatcatgggcaccatgagccacatg
aacagcatggtcagtagcatgggtggcagcgggcatcacgccagccaagcactggggctc
agtgccaacgggaccacggcccaagcgaacctctcctcggcccccaggaccgcaccgctg
ctctcctcctcaactggtaaagctcctcctaacctgtctcagggggttcccccactactg
cccaaccagtacatcatgggcccaggaggcctgctgcctgcctacccgcagatctacggc
tatgaggatctccacatgctacagtccagactgcctatgccctctttgcaggattactac
ggaatcacattccctggtcccgcagcactctctggcagagatgggagcctcgccaataac
ccctactcaggtgaagtcacaaagtttggcaggggtgactccacctcccctgcgcctagc
agcttgtcggcccaacagcagccccaacagggccagagccaagggcagaaccaggcccag
ccacaacccccccagccccagcctcaaggccaaccccagggccaccacaacagccagcag
cagcaggccttcctcccgccaggctacagctacacaggcctgccctactaccccgggatg
cctggcgctgccttccagtacggccacaccatgttcatgccccagggacaggggccagcc
aagcagcacggtgtgggtttgggaaacccctcagccagccccttccagcagcagcagcca
agcggctacggccagcacaccttcagctcagggtatgaggacctgacccagggccaagca
ggcgtagactatagcaagggctatagcaactcctcccagagccaggccaaatctgctgct
acaggccccggtaaaggcggcatatctgtgacgtcaggcaactccggggtcccagaaatc
agtggaagtgtttacaacaagacccagataaatctaatcactgaccttgactttgcactc
caattgtccgtttccagtcctttgataagcagggtttccatgcggggactccccctcctt
tcaacctgccttcggctatggggggtcctggaggggccccgggtggctacgctcccgccc
ccttcctccacatcctgcagcctgcccaccagcaaccccactctcagatgctgcaccatc
atctggccccggacggacagggaggtcctagccagcgaggccagtctagcagcatgcagc
agaagagccaggtcaacaagtccagctacggcagctccccatactggggcaactgacagg
gctgtgtgtgtacacactgcatcatgcccacctatcttgacttgtcagaccagagggggg
ggactttaa

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