Oncorhynchus nerka (sockeye salmon): 115142764
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Entry
115142764 CDS
T07952
Symbol
stx18
Name
(RefSeq) syntaxin-18
KO
K08492
syntaxin 18
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04130
SNARE interactions in vesicular transport
one04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
115142764 (stx18)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
115142764 (stx18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115142764 (stx18)
Membrane trafficking [BR:
one04131
]
SNARE
Syntaxin (Qa)
Stx-rER
115142764 (stx18)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin-18_N
DUF7165
DUF6331
SNARE
Motif
Other DBs
NCBI-GeneID:
115142764
NCBI-ProteinID:
XP_029538339
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All DBs
Position
LG15:complement(14572630..14592634)
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AA seq
332 aa
AA seq
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MAVDITVLFKASVKTVKTRNKAIGVGFDLPKDEIFKKSRPKHGFSLKAKEVISNITKLKD
FLLQHRKDYVNAGSLISSDLTRMTDNERDQIDQDAQIFMRTCSEAIKQLRSEAEKQVIPT
QIREHRGAVLDLIEIYLRGVCKLYSEQRAIRVKRVVDKKRLSRLEPEHHHSRVAVERSSP
AEQHSEEKTAKEENSSGGERSVTEVPENNVSLWEEGQGRVEDELSPEEMQMFEQENQRLV
SEMSNLVDEVRQIEGKVVEISRLQEIFAEKVLMQETEIDSIHQLVVGATENVKEGNEDIR
EAIKNNAGFRVWILFFLVMCSFSLLFLDWYDS
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atggctgttgatataactgtactgttcaaagccagtgtcaaaacggtaaaaacacgaaat
aaagctatcggagtagggtttgatttgcctaaagatgaaatcttcaagaagagcagaccc
aaacatggattttctctcaaggcgaaggaagtgatctccaacatcaccaagctgaaagac
tttctgctgcagcacaggaaggactatgtgaatgctggaagtctcatctcgtcagaccta
acccggatgacagacaatgagcgagaccagatcgaccaggacgcccagatcttcatgaga
acctgctctgaggccatcaagcagctccgctctgaagccgagaagcaggtcataccgaca
cagatcagagagcacaggggggcggtcctcgacctcatcgagatatatttgagaggagta
tgcaagctttactccgagcagagggctataagagtgaagagagtggtggacaagaagaga
ctgtccagactagagccagagcaccaccacagtagggtggcggtagagagaagctcaccg
gcggagcagcacagcgaggagaaaacagccaaggaggagaacagcagcggtggtgagcgg
agcgtgacggaggtaccggagaacaacgtgagcctgtgggaggagggccagggccgtgtg
gaggacgagctctcgcctgaggagatgcagatgtttgaacaagagaaccagaggctggtg
agtgagatgagcaacctagtagatgaagtcaggcaaatcgagggcaaggtcgtcgagatc
tcgcgactccaggagatctttgcggagaaggtgctaatgcaagaaactgagatcgacagt
atccatcagctagttgtgggagccactgaaaacgttaaagagggaaacgaggatatccga
gaggccatcaaaaacaatgctggattccgtgtctggatcctcttcttccttgtcatgtgc
tccttctctctgctcttcctggattggtacgacagctaa
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