Oncorhynchus nerka (sockeye salmon): 115142767
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Entry
115142767 CDS
T07952
Symbol
msx1
Name
(RefSeq) homeobox protein MSX-1
KO
K09341
homeobox protein MSX
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115142767 (msx1)
Transcription factors [BR:
one03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
115142767 (msx1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
HTH_NDX
DUF7645
Motif
Other DBs
NCBI-GeneID:
115142767
NCBI-ProteinID:
XP_029538342
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Position
LG15:14715127..14719365
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AA seq
305 aa
AA seq
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MRNFCHSTFRYFECLPPSEGQTCMAPTITMSALSIGLKTEDIHSRSVLVGKGEMQTNLIV
MAEETAIKPKVAILPFSVEALMADRKPNRDLTSPERSSIAGTSQALGSRMGSLSSLDNSV
PSLTIGSPFSVGDIMNMQEDAMVKPESPESQDRNSWIQSPRFSPTPRRLSPPACPLRKHK
TNRKPRTPFTTSQLLALERKFRQKQYLSIAERAEFSSSLNLTETQVKIWFQNRRAKAKRL
QEAELEKLKMAAKPMLPPAFGISFPLGAHVPSSYGGSHHFQRHSLPMSPMGLYAAHVGYS
MYHLA
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgagaaatttctgtcactctacttttcgatacttcgagtgtttacctccaagtgaaggc
caaacctgtatggccccaactattaccatgtcagctttatccattggcttgaaaactgaa
gacattcattcgcgttcggttctcgttggaaaaggcgagatgcagaccaatttgatcgtg
atggccgaggagacagcgatcaagcccaaagttgcgattcttcccttcagcgtcgaggct
ctgatggctgataggaaaccgaacagagacttgacatctccagaaaggtcatccattgcg
gggacgtcccaggcgctaggctcacggatgggctcgctttcgagcctggataactcggtc
ccctccttgaccatcgggtcgccgttctcggtaggcgacattatgaacatgcaagaggac
gcaatggttaaacccgagagtccagaaagtcaagaccgaaattcttggatacagagccct
cgcttttcacctactccacgaagactaagtccccccgcctgtccactgagaaagcacaag
accaatagaaagccccggacccctttcaccacgtcccagctcctggctctggagaggaag
tttcgccagaagcagtacctctccatcgccgagcgcgcagagttctccagctcgctcaac
ctgactgagacccaggtgaaaatatggtttcagaacagacgagccaaagccaagaggctc
caggaggcagaactggaaaaactaaaaatggcagccaagccaatgctgcctccggcgttc
ggaatttcctttccgctcggtgcgcatgtcccctcgtcgtatggagggtcgcaccacttc
cagaggcactccctgccgatgtctcccatgggactgtacgctgctcatgtcggatacagc
atgtatcacctcgcctga
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