Oncorhynchus nerka (sockeye salmon): 115142875
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Entry
115142875 CDS
T07952
Name
(RefSeq) receptor-type tyrosine-protein phosphatase T isoform X1
KO
K13297
receptor-type tyrosine-protein phosphatase T [EC:
3.1.3.48
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
one01009
]
115142875
Enzymes [BR:
one01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
115142875
Protein phosphatases and associated proteins [BR:
one01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
115142875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
Fn3_PTPRU
MAM
fn3
PTP-SAK
DSPc
Tc-R-P
Y_phosphatase3
TM_ErbB1
Ig_2
Pur_ac_phosph_N
ig
Ig_3
I-set
Motif
Other DBs
NCBI-GeneID:
115142875
NCBI-ProteinID:
XP_029538540
LinkDB
All DBs
Position
LG15:22786696..23202895
Genome browser
AA seq
1523 aa
AA seq
DB search
MRGYCLCIQSASKTDRRRACKIVTAKMDKGNYIIASLLFQLMDLICGQLFPGSCSFEEHY
SSCGYSVALGTNGFAWEQVNTWERPTMDAAVPTGSFMVVNGSGRASGQKAHLLLPTLKEN
DTHCIDFHYSLSSRDGSSPGVLNVYIKVNGGTQGNPVWNASASVTEGWVKAELAISTFWP
NSYQVIFEAISIQGHPGFIAVDEVRVLAHPCRKAPHFLRLQNVEVNVGQNATFQCTAGGK
WSQHDQLWLQQWNGKDTALMVTRVVNHRRFSATVSVGDTSQRSTSRYRCVIRSDGGSGVS
NYAELIVKAPPTPIAPPELLAVGATYLWLKPNANSIIGDGPIILKEVEYRTTTGNWAETH
IVDAPTYKLWHLDPDVEYEIKVLLTRPGEGGTGPPGPPLITRTKCADPVHGPQNVNVVDI
RARQLTLQWETFGYAVTRCHSYNLTVQYQYVFNQQEFAAEELIQTSSHFTLRGLRPFVTV
RLRLVLANPEGSKESEEIVKQTEEDVPGSVPLESIQTGPYEEKIFMQWKAPNETNGVITL
YEITYKALSSLDPSADLTTQRGRVFKLRNETQHLFVGLYPGTTYFFTLKASTNKGFGPPV
TTRIATKIAAPSMPEYETDIPPLNETDTTITVLLKPAQSRGAPVSVYQLVVKEERKQKVR
RAADVLECFSVPVSFKNASILDLPHYFAAELPPTYLTVVQPFSVGDNKTYNGYWNPPLSP
AKSYSIYFQALSKANGETKINCVRLATKVVIGRGQNTTPYILVIPSEGASTQDSDAVEPE
KQVDSTVKMAGVIAGILMFIIILLGVVLTFKRREIHTWRTLSVGKLAKKQKETASSSSTQ
REMGLVSTADKSTTKVSTLHKDDPFSTSSQDINGFTSPSPCSFSLQGKTLQSKSLLNSYY
SVSKEPVPATASIDSSHSEMAQPSLTIQTYPYGGCESVEMSYQAGQFQPAIRVADLLQHI
TQMKCGQGYGFKEEYEGLTEGQAAPWETAKKDDNRNKNRYGNIIAYDHTRVRLQLLDGDP
HSDYINANYIDGYHRPRHYIATQGPMQETVRDFWRMIWQENSGSIVMVTNLVEVGRVKCV
RYWPDETEVYGDVKVTLIETEPLAEYVIRTFTVQKKGHHEIREIRQFHFTSWPDHGVPCY
ATGLLGFVRQVKFLNPPDAGPIVAHCSAGAGRTGCFIAVDIMLDMAENEGVVDIFNCIRE
LRSQRVNMVQTEEQYVFVHDAILEACLCGNTAIPVCEFRAIYYNISRLDPQTNSSQIKDE
FQTLNIVTPRVRPEDCSVGLLPRNHDKNRSMDVLSVDRCLPFLISVDGESSNYINAALMD
SHKQPAAFIVTQHPLPNTVADFWRLVFDYNCSSIVMLNEMDAAQLCMQYWPEKSSCCYGP
IQVEFISADIDEDIINRIFRICNMARPQDGYRLVQHFQFIGWPAYRDTPLSKRSILQLVR
RLAKWQEQYDGGDGRTVVHCLTGGGRSGTFCAICSISEMIQQQNIVDVFHTVKTLRNNKS
NMVETMEQYKFCYEVALEALSAF
NT seq
4572 nt
NT seq
+upstream
nt +downstream
nt
atgcgaggatactgtctgtgtatacagtcagcgagtaaaacggacaggaggcgagcatgt
aaaatagtcactgccaaaatggacaaagggaactatatcattgcttcgcttctttttcaa
ctgatggacttaatatgcggacaattatttccaggcagctgttcgtttgaagagcactat
agcagctgtggctacagtgtggccctggggaccaatggcttcgcctgggagcaagtcaac
acttgggagaggcccactatggacgcggctgttcccacaggttctttcatggtggtgaac
ggctcgggccgggcgtcggggcagaaggcccatctgctcctacccaccctgaaggagaat
gacacccactgcatcgacttccactactctctatccagccgcgatggctccagtcccggg
gtgctcaacgtctacatcaaggtgaacggcggcacccagggaaaccctgtgtggaatgcc
tccgcctcggtgacagagggctgggtcaaggccgagctggcaatcagcaccttctggccc
aactcctatcaggtgatattcgaggccatatccatacagggccatccagggttcatcgcg
gtggacgaagtccgagtattggcccacccgtgccggaaagcacctcacttcctgcggctg
cagaatgtggaggtgaacgtgggccagaacgccaccttccagtgtactgctggggggaag
tggtcccaacacgaccaactgtggctacagcagtggaacggtaaagatacagccctcatg
gtgacgcgggtggtgaaccaccgacgtttctcagccaccgtcagtgtcggggatacgtcc
cagaggagcaccagccgctaccgctgcgtcatccgctccgatggcggctccggggtttcc
aactacgctgagctcatcgtcaaagctccccccacacctatagcccctccggagctcctg
gcggtgggtgctacctacctgtggctcaagcccaacgccaactctatcatcggggatggc
cccatcatcctgaaggaggtggagtaccgcaccactacaggcaactgggccgagacccac
atcgtggacgcccccacctacaagctttggcatttggaccccgacgtggagtacgagatc
aaggttctgctgacccggcccggcgaggggggcacaggacctccaggacctccgctcatc
acccggaccaagtgtgctgacccagtccacgggcctcagaatgtcaatgtggtggacatt
cgggcccgccagctcaccctgcagtgggagacatttggctacgccgtgacgcgctgccac
agctacaacctgacagtgcagtaccagtatgtgttcaaccagcaggagtttgccgccgag
gaattgatccagacatcatcccacttcaccttgcggggcctgaggcccttcgtcactgta
cgccttcgcctggtcctcgccaacccagagggaagcaaggagagcgaggagatcgtcaag
cagacagaggaggatgttcctggctctgttcctttggaatccatccagaccggaccgtac
gaggagaagatcttcatgcagtggaaggcacctaacgagaccaatggcgtcatcacgctc
tacgagatcacctataaggctctgagctccttggaccccagtgcagacctgaccacccag
cgtggcagggtgttcaagttacgcaacgagacccaacacctgttcgtggggctctacccg
ggcaccacgtacttcttcaccctcaaagccagcaccaacaaaggctttggaccccctgta
accacccgcatcgccaccaagatagcagccccatcaatgccggagtacgagacagacatt
ccccctctgaatgagacggacaccaccatcacagttctgctgaagcctgcgcagtccaga
ggagctcccgtcagtgtctatcagctggttgtgaaagaggaacgcaagcagaaggtgcgg
cgggcggccgacgtgctggaatgcttctccgtcccggtcagcttcaagaatgcctccatc
ttggatttgccccactactttgcagcggagctcccgcctacatacctgactgtggtgcag
cctttcagcgtaggtgacaacaagacctacaatggctactggaacccccctctctctcca
gccaaaagctacagcatttacttccaagccctgagcaaagccaatggggaaaccaaaatc
aactgtgtgcgactggctactaaagtggtaataggtaggggacaaaataccacgccgtac
atacttgtcatccccagtgaaggcgcgtccacccaggactcagacgctgtggagcccgaa
aagcaggtggacagcactgtcaagatggccggtgtcatcgcgggcattctcatgttcatc
atcattctactgggagtggttctcaccttcaaacgcagagagatacacacatggagaact
ctgagtgtggggaaactggccaaaaaacagaaggagacagccagcagcagcagcacccag
agggagatgggactggtgagcacggctgataagagtaccaccaaagtcagcactctgcac
aaggacgaccccttctccaccagcagccaggacatcaacggtttcacatccccctctccc
tgctccttctctctgcaaggcaaaacgctgcaaagcaaatccctcttgaattcctactac
tcagtgtcgaaggagccagtccctgcaacagcatccattgacagcagccatagtgagatg
gcccagccatcgttgaccatccagacgtacccgtacgggggctgtgagtcagtggagatg
tcctaccaggccggccagttccagccggccatccgtgtagccgacctcctccaacacatt
acccagatgaagtgtggccagggatacggctttaaggaagagtatgagggcctgaccgaa
ggacaggcggccccatgggagaccgccaagaaggatgacaaccgcaacaagaaccgatat
ggcaacatcatcgcttatgaccacactcgagtcaggctgcaactgctggacggagacccc
cactcagactacatcaacgccaactacatagacgggtatcatagaccaagacattacatc
gctacacaaggccccatgcaggagacagtgagagatttctggaggatgatctggcaggag
aattccggcagtattgtcatggttaccaacctggtggaagtgggcagggtgaagtgtgtg
aggtactggcctgacgagaccgaagtgtacggagatgtcaaggtgacactgatcgagaca
gagccactggccgagtatgtcatccgcaccttcacagtacagaagaagggccaccacgag
attcgagagatccgtcagttccacttcaccagctggcctgaccacggggtaccctgctat
gccaccggcctcctgggcttcgtccgccaggtcaagttcctcaacccgcccgacgctggc
cccattgtggcccactgcagtgccggggctggaaggacaggctgtttcatagctgtggac
atcatgctggatatggctgagaacgagggagtggtggacatcttcaactgcatccgggag
ctgcgctcacaaagggttaacatggtgcaaaccgaggagcagtatgtttttgtccacgac
gccatcctcgaagcctgcctgtgtggaaacacggccatcccagtctgtgaattcagagcc
atatactacaacatcagcagattggacccacagaccaactccagccaaattaaggatgaa
tttcagactctgaacatcgtgactccccgggtccggcctgaagactgtagcgtgggactg
ctcccccggaaccacgacaagaaccgcagcatggatgtcctgtctgtggatcgatgcttg
cccttcctcatctccgtggacggagagtccagtaactacatcaacgctgccctcatggac
agccataaacagccagcagccttcatcgtaacccagcatccactgcccaacacggtggcc
gacttctggaggctggtgttcgactacaactgctcctcgatagtaatgctcaacgagatg
gatgccgcacagttgtgcatgcagtactggcccgagaagagctcctgctgctatggcccc
atccaggtggagttcatctcagccgacatcgacgaagatatcatcaaccgcatcttcagg
atctgcaacatggccaggccccaggacggttaccgtttggtgcagcatttccagttcatt
ggctggcctgcttaccgcgacacgcccctgtccaagcgctctatcctgcagctggtgaga
cgtctggccaagtggcaggagcagtacgacgggggagacggacgcaccgtggtccactgc
ctgacgggtggtggacggagtggtaccttctgtgccatctgcagcatcagtgagatgatc
cagcagcagaacattgtagacgtgttccacaccgtcaagacactgaggaacaacaaatcc
aacatggtggagactatggaacagtataaattctgctatgaagttgctctggaggccctt
agcgcattctga
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integrated database retrieval system
