Oncorhynchus nerka (sockeye salmon): 115142882
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Entry
115142882 CDS
T07952
Name
(RefSeq) RNA-binding protein 12-like
KO
K24526
RNA-binding protein 12
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
one03041
]
115142882
Spliceosome [BR:
one03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
115142882
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
115142882
NCBI-ProteinID:
XP_029538554
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Position
LG15:23751266..23766152
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AA seq
869 aa
AA seq
DB search
MAVVIRMQGLPIVAGTMDIRHFFSGLTIPDGGVHIVGGEHGEAFIVFATDEDARLGMMRN
GGAIKGSKVSLLLSSKTEMQNMIELSRRRFKTGNVEGAAGNGRRPGPPVNTCGRGSLPNT
LQGFSNTTPATVTTPTSAHETISNKNVSTFATTGMGNMPPSFSNNFSSPNLTMGSSMRTA
MSSRNSVPPPIHPLTTMPSLPPMPSIPPMPLPPPVSSVPPVPTVSPLTQGPPVLPMSLSH
MGSMPPFNPGVPPPSGLAPNHMFVGHMNPLLNLQAHMKAAIRNSDELYVHLQGLPFSATE
MDIGEFFCGLGVDSIRLVRDNIGRSSGRALAKFFSPQDTFEALKRSSGMLRQRYVDISPA
TESQWMSVSSGGNGVGGQAHSKSSNVPQDQHHRSNMNSASPSTRDHARSRSPHNKEFCVY
LKGLPYEAVNKQICEFFKKLDIMEDRIYIAYGPTGRATGEGFVQLKNEMDYKVALSCHMQ
YMGSRFIQVHPISKKAMFEKIDSIRQRMQGVDKKNNSESGKSPRNCAHISNIPYNVSKKD
VHLFLEGIAVFEESLKVLVDSSGNGLGQAVVQFRVEEDALNAERLHRQKLNGRDAFVHLV
TFEQMKEIERNPPPQVKRGQKFEGNSQGQAHGHAQAQDPIQAQAHPFASITGEEFNFLRN
TVGNLGNGPFAQFTVPGNGIVGPPPLPPFAASLENVAHSIPPPMVAGHLPGAVLAPPSFR
PGSNNGPPGFGPEGMRDRPPFDNGSRKSGGHNNRGSGQGRLDVRPQSALGRGPGSDPLRE
QLPGGPGNPRGPTIVKIQNMPFTVTVDEILDFFYGYQVLPGSVCQQFSEKGLPTGEAMVA
FESHEEASSAVMDLNDRPIGARKVKITLG
NT seq
2610 nt
NT seq
+upstream
nt +downstream
nt
atggctgtggtcatccgcatgcagggtctcccgatagtggcggggaccatggacatacgc
catttcttctctggattgaccatcccagatggtggggtgcatattgtagggggtgaacat
ggtgaggcttttattgttttcgccacagatgaagatgccaggcttggcatgatgcgtaac
gggggagcaatcaaaggttcaaaagtgtcacttttgctgagcagcaagaccgagatgcag
aatatgattgagcttagccgcaggcgttttaaaacgggcaatgtagagggagcagcagga
aatggtagaaggccaggtccccccgtcaacacatgtgggaggggcagtctacccaacact
ttacaagggttcagcaacaccacaccagccaccgtcaccacacctacctctgcacatgaa
accataagcaacaaaaatgtgtccacgtttgccaccactggcatgggaaacatgcccccc
agtttcagcaacaacttcagcagcccaaatctcaccatgggatccagtatgagaacagcc
atgtcctcccgcaactctgtaccaccacctattcaccctttgacaaccatgccatccttg
ccacccatgccttccataccccccatgccacttccaccaccagtgtcctctgtgcctcct
gttcccactgtgtcacctttaacccaaggcccccctgtccttcccatgagtctgtcccac
atgggctcaatgccaccattcaacccaggtgtcccaccccctagtggactggccccaaat
cacatgtttgttggccatatgaaccctctgttaaatctccaggcacacatgaaggcagca
atacgtaattcagacgagttatatgttcaccttcaaggcctgcccttctcagctactgaa
atggatattggggagtttttctgtgggttaggggtggactccatccgactggtcagggac
aacattggccggagtagcggcagggccctggccaagttcttttcccctcaggacactttt
gaggcactcaaaagaagcagcggaatgttaaggcagaggtacgtggacatctctccggcc
acagagagccagtggatgagtgtcagcagtggtggcaacggggttggagggcaagcccac
tcaaaatccagtaatgtgccccaagaccagcaccaccgcagcaacatgaattcagcatct
ccttcaaccagagatcatgcaaggtctcgctcccctcacaacaaggagttctgtgtctac
ctaaaaggcctgccatacgaagcagtaaataaacagatctgtgagttcttcaaaaagctg
gacattatggaagaccgcatttacattgcttatggacccactggccgagctacaggtgag
ggctttgtccagttgaaaaatgaaatggattacaaggttgccctcagctgtcacatgcag
tatatgggaagccgattcatacaagttcaccccatcagtaagaaagctatgtttgaaaag
attgattccattcgtcaaaggatgcagggtgttgataagaaaaacaactctgagtccggc
aagagccctagaaactgtgcacacatctcaaatattccatataatgtgtcaaagaaagat
gtccatctgtttctggaaggcattgcagtatttgaagaaagtcttaaagttctggttgac
agcagtggtaacggtctaggtcaggctgttgtgcagttcagggtagaggaggatgcgcta
aatgctgagagactacacaggcagaagttaaatggcagagatgcctttgtgcatttggtc
acctttgagcagatgaaggaaatcgagagaaacccaccaccacaggttaagagaggacag
aaatttgaagggaactctcaaggccaggcacacggccatgctcaggcacaggatcctatt
caagcccaagctcacccttttgccagtataacaggagaagagttcaacttcctcagaaac
actgttggcaatttaggcaatggtccttttgctcaatttactgtcccaggtaatggaata
gtgggccctcctcctctacccccatttgcagcaagtctagagaatgtagcccatagcatt
cccccacccatggttgctggtcacttgcctggagcagttctggcacccccaagcttccga
ccaggtagcaacaatggcccacctggctttggaccagagggcatgagggacaggccacct
tttgacaacggctctagaaagagcggaggccataacaaccgaggaagtggccaagggcgt
ttagatgtgcgccctcagtctgccttgggccgtggccctggctctgaccctctgagagag
cagttacccggaggccctggtaaccctcgtggaccaaccattgtaaagatccaaaacatg
cctttcaccgtaacagtcgatgagatcctagatttcttttatgggtatcaagtgctgcct
ggttcagtctgtcaacagttcagtgaaaagggcctgcccactggtgaggcaatggttgcc
tttgagtcacacgaggaggcatcatctgctgtcatggatttaaatgataggcctattggg
gctaggaaagtgaagataaccctaggataa
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