Oncorhynchus nerka (sockeye salmon): 115142912
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Entry
115142912 CDS
T07952
Symbol
usp48
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 48 isoform X1
KO
K11858
ubiquitin carboxyl-terminal hydrolase 48 [EC:
3.4.19.12
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
one01002
]
115142912 (usp48)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
one04121
]
115142912 (usp48)
Enzymes [BR:
one01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
115142912 (usp48)
Peptidases and inhibitors [BR:
one01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
115142912 (usp48)
Ubiquitin system [BR:
one04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
115142912 (usp48)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
DUSP
ubiquitin
Usp-48
Motif
Other DBs
NCBI-GeneID:
115142912
NCBI-ProteinID:
XP_029538611
LinkDB
All DBs
Position
LG15:complement(24599620..24623450)
Genome browser
AA seq
1051 aa
AA seq
DB search
MAPRVQLEKAAWRWVESVRPEDIQREHIEIAYRICVPACKRGACRRNCKGNPNCLVGIGE
HAWLGEIDENTFHNIDDPNSERRDKNTFVGLTNLGATCYVNTFLQVWFHNLELRRTLYLC
QNARAEEHNMDSDYEPRSICEHLQYLFALLQNSNRRYIDPSGLVKALGLDTGQQQDAQEF
SKLFLSLLEDTLSKQKNPNLHNVIQQQFCGQMSYVTVCNQCGRASPLPSRFYELELNIQG
HKNLTECVTEFLKEEKLDGDNRYFCESCQSKQNAARRIKLHSLPRVLNLQLMRFVFDRQT
GHKKKLNTFISFPEQLDMGPFLEEKEDEKCVYELSAVLIHRGVSAYSGHYIAHVRDARTS
DWYKFNDEEIEKMEGKKLQLGIEEDIAETVKSQTRKPKCSKGYHCSRNAYMLVYKCQREE
DTDPMETNIEVPGFLGRLVDRDNRKFEEWCLEMADMRKQSVDKGKAKHEEVKELYELLPA
EDGQEYEFVPLEWLKKWLDDSTVTKEIDNGNFLCSHGKLHPDKVGEAKRISVKAAELLFD
KYGGGPRLDGSTLCEECVGQRCRVLRLKNQLAEDYKEVTNLVKCPPKSDEGYWAGKTSLR
SWRQLALEQLEEDEEETKHSNGKTNGEGPEITATKEYGPENLDGDEEEMKTFNEDILCRH
GGLSILESERRLVTEEVWSKLRVYFPKAPQFTQLQEPCQQCLRLEREGKENEALNRMMAS
EQKSSLLNLFQEKNRPTLTKWPQETDILYIVPLFFVDEWRRFIRRPTKTTPVSSVGNSLL
LCPHRGFMFTFDSMLKGDAQHIALLWPDEWEVISRHFLVDQPISICRISGATPNGSSVEY
TTQPELCRDCREGFIFQQQRDMREYAQATVYVRKVIDDKRLKDAAPEMNVSGSEAEDERE
EPVAKVDGERDPDFSQSEDGAKRQKLSDGTVSAAASPTPMASGGKSGIRRSTRHRKLRGE
KALIVSANQTLKELKIQIMHAFSVAPFDQNLSIDGRCLTDDSATLGSLGVIPESVICLKA
DEPIADFAAMDDVYQVCMPEEGFKGTGLLGH
NT seq
3156 nt
NT seq
+upstream
nt +downstream
nt
atggcgcctcgcgtacagcttgagaaagcagcctggcgctgggtcgagtcggtgagacca
gaggacatacaacgggaacatattgagatagcttaccgaatctgtgtaccggcgtgcaag
aggggagcatgcaggaggaattgcaaggggaacccaaattgccttgtcggtattggggaa
catgcctggttgggagagattgacgagaacaccttccacaacattgacgatcctaactcg
gagcgccgggacaagaacacgtttgtgggtctgacaaacctgggcgccacatgttacgtc
aacacctttctgcaggtgtggttccacaacctggagctgcgtaggaccctgtacctgtgt
cagaacgccagggcagaggagcacaacatggactcagactacgagcctcgcagcatatgt
gaacacctgcagtacctgtttgcactgctacagaacagcaacagaaggtacatagacccc
tcagggctggtcaaggctctggggctggacacaggacaacagcaggacgctcaagagttt
tccaagctcttcctctcgctattggaggacaccttatccaaacagaagaacccaaacctg
cataatgtcatccagcagcagttctgtggccagatgtcttacgtcactgtgtgtaaccag
tgtggtcgtgcttctcctctgccgtcccgattctacgaacttgagctcaacatccagggc
cataagaaccttacagaatgtgttacagagttcctcaaggaggagaagttggatggtgac
aaccgctacttctgtgaaagctgccagagcaaacagaacgccgctcgacgcatcaaactg
cacagcctcccacgggtactcaacctgcagctcatgcgtttcgttttcgacagacaaaca
ggtcacaagaagaagctcaacaccttcatcagtttcccagaacagctggacatgggcccg
tttctggaggaaaaagaagatgagaagtgtgtgtacgagctgagtgcggtcctgatccac
cgcggggtcagcgcctactcgggtcactacatcgcccacgtgcgagacgcccgcaccagc
gactggtacaagttcaacgacgaggagattgagaagatggaaggcaaaaagctacagctg
ggcatcgaggaggacatcgccgagacggtgaagtcccagacccgtaagcccaagtgcagt
aaaggatatcactgctccagaaatgcttacatgctggtgtacaaatgccagagagaggag
gacacagaccccatggagaccaacattgaggtgccaggctttctggggaggctggtggac
cgagacaacaggaagtttgaagagtggtgcctggaaatggccgacatgcgcaagcagagc
gtcgacaagggcaaggccaagcacgaagaggtgaaggaactctacgagcttttacctgcg
gaagacggccaagagtatgagtttgtgcctctggagtggctgaagaaatggctggatgac
tcgacggtcaccaaagaaatcgacaacggcaacttcctgtgttctcacggtaaacttcac
ccagacaaggtgggggaggccaagaggatctccgtcaaagctgcagagcttctcttcgac
aaatatggaggaggacccaggctagatggctcaactctctgtgaggaatgtgtggggcag
agatgcagggtgctgcggctaaagaaccagctggccgaggattacaaagaagtcaccaac
cttgtcaagtgcccgcccaaaagtgatgaggggtactgggcgggcaagacgtctctgcgg
agctggagacagttggccttggagcagctggaggaggatgaggaggagaccaaacacagc
aacggcaaaaccaatggagagggaccagagatcactgctactaaagagtacggcccggag
aacctggacggagacgaggaggaaatgaagaccttcaacgaggacatcctctgtcggcat
ggtggtctgagtatcctggagagcgagcggcggctggtgactgaggaggtgtggtccaaa
ctgagggtgtacttccccaaagccccccagttcacccagctacaggagccctgtcagcag
tgcttgaggctggagcgagaggggaaggagaatgaggctctgaacaggatgatggcgtcg
gaacagaagagctccttactcaacctcttccaggagaagaacaggcccacactcaccaag
tggccacaggagacagatattctctacatagttcctctgttctttgtagacgagtggaga
aggttcatcaggaggcccactaagaccaccccagtgtcaagcgtagggaacagtttgctc
ctatgtccacatagaggcttcatgttcaccttcgactccatgttaaagggagacgcccaa
catatagctcttctctggcccgacgaatgggaggtgatcagcagacacttcctggttgat
cagccaatctccatctgccggatcagcggggccacacccaacggctccagtgtggagtac
accacccagcctgagttgtgtagggactgcagagaaggcttcatttttcagcagcagagg
gacatgagagagtatgcacaagccacagtctacgtacgcaaggtcatagacgacaagagg
ttgaaggatgcagctcctgagatgaatgtgagcgggtcggaggcagaggatgagagggag
gagcctgttgctaaggtggatggagagcgagaccctgatttcagccagtcagaggacggg
gcaaagcgtcagaagctgagtgacggcaccgtcagtgctgccgcaagtcccacccccatg
gccagtggtggcaaatcggggatcaggaggagcacgaggcacaggaagctccggggagag
aaagcactcatcgtctcagccaatcagacgctcaaggagttgaaaatacagatcatgcac
gccttctccgtggccccgtttgatcagaacctgtcgatcgatggccggtgtcttacggac
gattctgccaccctcggcagcctaggagtcatcccagagagcgtcatctgtctgaaggct
gatgaacccatagcagattttgcagcaatggatgatgtttatcaggtgtgtatgcctgaa
gaaggattcaaagggactgggcttcttggccactga
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integrated database retrieval system
