Oncorhynchus nerka (sockeye salmon): 115142913
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Entry
115142913 CDS
T07952
Name
(RefSeq) laminin subunit beta-3-like
KO
K06244
laminin, beta 3
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04382
Cornified envelope formation
one04510
Focal adhesion
one04512
ECM-receptor interaction
one04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
115142913
04518 Integrin signaling
115142913
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
115142913
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
115142913
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Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_N
EGF_laminin
EGF_LMN_ATRN
LAMB1
GldM_1st
KASH_CCD
hEGF
CCDC171
GEMI5_RBS
CCDC39
DUF745
Motif
Other DBs
NCBI-GeneID:
115142913
NCBI-ProteinID:
XP_029538616
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Position
LG15:24647944..24677001
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AA seq
1150 aa
AA seq
DB search
MWILFHLAALTAVAATQRDCSRGACYPPMGDLLLGREHQLHASSTCGLAGSEVFCTYFGQ
WRMKCCTCDSRNPSSQLAHTIQNVLSTAGPNKWWQARKDVSPVTLQLDLQNLFQLDTIIL
TFKGPHPSALVVERTLDNGQTWQPSLYMASDCRSAFPGIAMTMPRSLDQTYCYTLRPANS
YQDQTIQFSPLRQFSSISVPNGQKIQEVSGLTGLRVKLTELGAVPRLPGRTPSLFYALGE
MRVMGTCLCHGHANRCLQDTTANQMPSTQVSAQCECQHNTAGVNCEQCADIYNDLPWRSA
EEGNTHTCKRCECNNHAQRCRFDPSVYEASGWRSGGVCEGCLHHTTGPKCDRCAPGYQLN
HRSSIDQPDACIRCHCSAEGAENGGRCDDVTGSCRCKMGYYGLTASNPLGCTKCFCSAEG
SLSSVCDPVSGQCPCRPYHQGLTCELCSRGYWNPSSLHGCEPCRCDPTNSHGDTCDWSTG
QCQCRSGFGGRTCTECPDNTYGDPLIGCRLCQCAAGGMVPGGCDKRTGACRCRIGVIGTR
CDACSRGHVYSFPDCEVCPSCFFSLDSYIQNLTLGLERLSARIPSRPGGSLPTGLGLRIQ
ALEATLIQIRDSLPLPTPSLRQVNDALFQLRRLRDQLDQVDGDLSPQGRGLELGSQLDEL
QALLGGLGLLYNSKRDALRNPINSNNAGAFSSIKNAYDESTDAAKSVDASGKTVDQSSAV
REDALDLQNQVQPENTRDLEKLNQQLNTKPDLSPTAKQVCGSVRSAPCIPAQCDGELCPA
EGAPPCGRGESCVGALPLGTRAVRDAEEVKDRLQQLNGKITQAAAQIQKTQDTVNLVRQS
TDDLVNQMRRARDDLEADLQETRYFVKELKDFLSDPSSDPTVISTVSEWILNAKLPLSLA
ALKRKLQEIRALAAGLPDSKAVLDQAGPQLDTARRLLQEAQDARDAGLGVKDDVDGLLEG
FTAVEGSLSGLNDKVQDSLDIVEDISNSLAQTKAQLTPAVKALGEVSALAEGMKPQLEGL
KALVRSGGLLAQNAEGEANKANKEADAATRDLASLEKQLEQLRAAERTSGHGDGTGTTGE
RLRKLQEEAGSLAQDTGDMMKALAGKADSLRRLQDEVLLKSQRLTGLDGKLRDLLADMRQ
KVKILSTCQG
NT seq
3453 nt
NT seq
+upstream
nt +downstream
nt
atgtggattttattccacttagcagccctgacagcagtggctgcgacccagagggactgt
tctcggggggcctgttacccccctatgggagacctgctcctcggtagggaacatcagctt
catgcctcctccacctgcggccttgccggctctgaggtgttttgcacctactttggacag
tggaggatgaagtgctgtacctgtgactccaggaacccatccagtcagttggctcacacc
atccagaacgttctatccaccgctggacccaacaagtggtggcaggccaggaaagacgtg
agtccggtcaccctacagttggacctacagaacctgtttcagctggacaccatcattctg
accttcaagggtccccaccctagtgcgctggtggtggagaggacgttggataatggtcaa
acctggcaaccgtcactctacatggcctcagactgtcgctcggccttccctggcattgcc
atgactatgccacgctctctggaccagacctactgctacaccctacgccctgccaactct
taccaggaccagaccattcagttcagccccttgcgccagttctctagcatcagtgtcccc
aatgggcagaagattcaagaggtgtcaggattgacaggcctgcgggtgaagttgactgag
ctgggtgctgtgccccgcttgcctggccgcaccccctctctgttttatgccctcggagag
atgagagtgatgggcacctgcctctgccacggccatgccaaccgctgtctgcaggatact
actgccaaccagatgcctagcacacaggttagtgctcagtgtgagtgtcagcacaacaca
gcaggtgtaaactgtgagcaatgtgctgatatctacaacgacctgccctggagatctgca
gaggagggaaacacacacacctgcaaacgttgtgagtgtaacaaccacgcccagcggtgc
cgtttcgacccatctgtgtatgaggcgagtggatggaggagtgggggagtgtgtgagggc
tgtctgcaccacacaaccgggcccaaatgtgaccgctgtgcccctggataccaactcaac
caccggagcagcatagaccagcctgatgcctgcatacgctgccattgcagtgcagagggg
gcggagaatgggggtcggtgtgatgatgtcacagggtcgtgtcgctgcaagatgggatac
tatggcctgactgcctccaaccctctgggctgcacgaagtgcttctgcagtgcagagggc
tccctgtccagtgtgtgtgaccctgtgagcggtcagtgtccctgtcgaccttaccaccag
gggctgacttgtgaactctgttcccgtggttactggaacccctcctccctccacggctgt
gagccctgtcgctgtgaccccaccaactcccatggtgacacctgcgactggagtacgggt
cagtgtcagtgcaggtcagggttcggaggtcgtacctgtacagaatgtcctgacaacact
tacggagaccccctcattggctgcagactgtgtcagtgtgctgctggaggcatggtacca
ggaggctgtgataagcgtacaggggcctgccggtgccgtattggtgtcataggtactcgt
tgcgatgcctgtagccgtggccatgtttactcctttcccgactgtgaagtctgcccctcc
tgcttcttctctctggactcctacatccagaacctcaccctgggcctagagagactctcc
gccagaatcccctctcgtcctggcggctcgttgcccaccggtctgggtctccgcatccag
gccttggaggccactctcatccagatacgtgactctctcccactcccaactccctctttg
agacaagtcaacgacgccctctttcagctacgcagactaagggaccagttagatcaggtg
gatggggatctgtcaccccaaggccgaggcctcgagctgggctcacagctggacgagttg
caggctctcctgggcggtctgggtctgctgtacaactccaagagagatgctctaaggaac
cctatcaactccaacaatgcaggggccttctcttctataaagaatgcctatgacgagtcc
acggatgcggcgaagagtgtggatgctagtgggaagactgtagatcaatcttcagcggtc
agagaggacgctcttgacctccagaaccaggttcaaccagaaaacaccagagacctggag
aaactcaaccagcagctgaacaccaaacctgacctctcacccactgccaagcaggtgtgt
ggcagtgtgcgctctgccccttgtatccctgcccagtgtgatggtgagctgtgccctgcg
gagggggcgccaccctgtggtcgtggcgagagttgcgttggggctctgcctctggggacc
cgagctgtgagggatgctgaggaggtaaaggacagactgcagcagctcaatgggaagatc
acacaggctgctgcacagatccagaaaacacaggacacggtcaatctggtcagacagtcc
acggacgatctggtcaatcagatgaggcgggccagggatgacttggaggcagatctgcag
gagacaagatactttgttaaagagctgaaggacttcctgtcagacccgtcgtcagacccg
acagtcatcagcacggtgagtgagtggatcttgaacgccaagctgcctctcagtctggca
gctctgaagaggaagcttcaggagatcagagccctggcggcaggactcccagacagcaaa
gcagtcctggaccaggctggaccacagctcgacaccgcccggcgcctgctacaggaggcc
caggacgccagggacgctgggctgggtgtgaaggatgatgttgacgggctgctggagggc
ttcaccgccgtggagggctccctctctggcctgaacgacaaagtgcaggacagcctggac
atagtggaagacatcagcaacagtctcgcacagaccaaggcccagttgactcccgcggtg
aaggctctaggggaggtgtctgccctggctgagggaatgaaacctcagctggaggggctc
aaggcgctggtgcgctctggaggtctgctggcccagaatgctgagggagaggccaataag
gctaacaaggaggcagatgctgcgaccagggacctggcgtccctggagaagcagctggag
cagctgcgtgctgcagagaggaccagtggtcatggcgatgggactgggacaacaggtgag
cgtctccggaagctgcaggaggaggctggttctctggcccaggacactggagacatgatg
aaggcactagcaggtaaagcagactctctgcgtagactacaggatgaggtcctactgaag
tcccagaggctgaccggtctggacggcaaactgcgggacctcctggctgacatgagacag
aaggtcaagatcctctccacctgccagggctga
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