Oncorhynchus nerka (sockeye salmon): 115142973
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Entry
115142973 CDS
T07952
Name
(RefSeq) serine/arginine-rich splicing factor 3-like
KO
K12892
serine/arginine-rich splicing factor 3
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03040
Spliceosome
one05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115142973
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
115142973
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
one03041
]
115142973
Spliceosome [BR:
one03041
]
Common components
Common spliceosomal components
SR proteins
115142973
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
115142973
NCBI-ProteinID:
XP_029538761
LinkDB
All DBs
Position
LG15:28400219..28409424
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AA seq
172 aa
AA seq
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MGEPAHLRDCPLDCKVYVGNLGNSGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDP
RDATDAVRELDGRTLSGCRVRVELSNGEKRSRSRGPPPSWSRRPGRDDYSSRRRGSPPVR
RRSPRRRSFSRSRSRSPSRDRRRDRSISRDRNHKPSRSFSRSRSRSRTTERK
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
atgggagaacctgctcatctccgagattgtcctcttgattgtaaggtatatgttgggaac
ttgggcaacagtggaaacaagactgagttggagagggcgtttgggtactatggccccctg
cgtagtgtgtgggtggcgaggaaccccccaggctttgcctttgtcgagtttgaggacccc
agagatgcaactgatgctgtgagagaattggatgggagaactctgtctggctgcagagtg
agagttgagttgtccaatggtgagaaacgctcgaggagccgcggacctccaccctcctgg
agccgtcgccctggacgtgatgactacagcagcaggcgccgtgggagcccgcctgtcaga
cgccgctctcctaggaggaggagcttcagccgcagtcgcagcaggtctccgtcacgagac
agaaggagagataggtctatctccagagacaggaaccataaaccttcaagatccttctca
aggtcccggagccgctctaggaccacggagagaaagtga
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