KEGG   Oncorhynchus nerka (sockeye salmon): 115143056
Entry
115143056         CDS       T07952                                 
Name
(RefSeq) lysine-specific demethylase 5B-B-like
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
one  Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:one00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:one01009]
    115143056
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:one03036]
    115143056
Enzymes [BR:one01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     115143056
Protein phosphatases and associated proteins [BR:one01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     115143056
Chromosome and associated proteins [BR:one03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    115143056
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel PHD ARID zf-C5HC2 JmjN PHD-1st_NSD
Other DBs
NCBI-GeneID: 115143056
NCBI-ProteinID: XP_029538923
LinkDB
Position
LG15:31157037..31197425
AA seq 1493 aa
MTQLRTNEFIAPPECPVFEPSWEEFADPFAYINKIRPIAEKTGICKVRPPKGWQPPFACD
VDSLHFTPRIQRLNELEAQTRVKLNFLDQIAKFWELQGCTLKIPHVERKILDLYQLNKLV
NDEAGFDAVCRERRWSKIALKMGFAPGKAIGSHLRSHYERILYPYNLFQTGANLLKPTLT
NDTKDTDYIPHDLPQRQSVQPLETCSIARRAKRMRAEEGCMKTVTEEDCENRPNLRRRMG
SYVAKPEPQAVKVLPVQVKQEATEHEEPITSDKENMLTKKNDPTVDQYMCLVCGSGSEED
RLLLCDGCDDSYHTFCLIPPLHDVPKGDWRCPKCLAQECCKPQVAFGFEQAGRDYSLRTF
GDMADSFKSDYFNMPVHMVPTELVEKEFWRLVSTIEEDVTVEYGADIASKEFGSGFPIRG
GRFQVSPEDEDYLSSGWNLNNMPVMDSSVLTHITADICGMKLPWLYVGMCFSSFCWHIED
HWSYSINYLHWGEPKTWYGVPGYAAEKLEWVMRKLAPELFESQPDLLHQLVTIMNPNTLM
NHGVPIYRTNQCSGEFVITFPRAYHSGFNQGFNFAEAVNFCTMDWMPMGRMCVDHYRQLN
RYCVFSHDEMVCKMASKADTTMDVALASAVQRDMTVMLQEEDKLRDKVSKMGVQRSQQAE
YDLLPDEERQCSKCRTTCYLSALTCPCSPGQLVCLHHAHDLCSCTSSELTLNYRFTMAEL
YPMMEAVTLRAESYTYWVSHVSDILEAKQDKKSGLEELRSLVVEAEVKRFPQSDLLRQLR
TVTLDAEKCAVVAQQLLIGKRQTRYRSGGRKSQSQNLLTVEELRSFVRQLHNLPCSIRQA
PLLKDLLTRVDDFQQSSEQLLSDEAPSPVALQGLLDLSLGLDVELPQLALLRERLEQARW
LDGVKGASVRPHSLCLDTMRRLIDQGVGLAPHGSVERAMARLQELLTMSEHWEERALRLM
EARPRHCVETLVEALQEVASIPAYLPNCLLLKDTVDQAKDWLQEAETLQLGGRIPVLDTL
TDLVSRAKAIPVWLDPLARLDSLVFDVQAWKESAAKTFLMKNSAYSLLEVLCPRCEAGTG
PQQSKYKRAKDAAQCSERNSARLDCLSDVERALSESKDSASAMATLAEVRQKEMASLLAL
RASNESKLLLAGDCGALRVCVCHKAPSGAMLQCELCRDAFHRSCVLGSNQDPLPNQAWVC
PQCQLSEKPPLDRVLPLLASLQRIRVRLPEGDALRFLIERTVRWQHRVQQASAEGVVVTT
SHQRWASSSPTWALSPTQETNSMSFYTEHQCIPLQGLSPELEELMVEGFLLQVTLPETQQ
LYRSLIKLDPRHHHHTDSPFPQHSAEQDQHQQNSQGGSPPHNQNGVACPKKEAVNGKRTK
RHMEEEGSERKDKAKKPRKKKPKLNKERSQEAKGTSSLTATHSDLSLSDSDEDFTLCAAP
WCREPEGKQVNWVQCDGSCQQWFHQVCVGVSAKQAEKEDYICISCTQPDHIRE
NT seq 4482 nt   +upstreamnt  +downstreamnt
atgacccagcttcggaccaacgaattcattgctccaccagagtgtcctgtttttgagccc
agttgggaggaatttgccgacccatttgcgtatatcaacaaaatacggcctattgcagag
aaaacgggcatctgcaaggtccgaccgccaaagggatggcagccaccgtttgcatgcgac
gtggacagtctgcacttcactccccgtatccagagacttaatgagttggaggctcaaacc
agagtcaagctcaacttcctggatcaaatcgcaaagttctgggagctacaagggtgcaca
ttgaaaatccctcatgtggaaagaaagattctggacctataccaactcaacaagttggtg
aacgatgaggcgggttttgatgcggtttgcagagagagacgctggtctaagatagccctg
aagatgggctttgctccaggaaaggccataggctctcatctgcgctcccactatgagagg
atcctttacccctacaacctgttccagactggagccaaccttctgaagcccaccctgacc
aacgacacgaaggacactgactacatcccccatgaccttccccagcggcagtctgttcaa
cccctggagacctgcagcatcgcccgcagagccaagcgcatgagagctgaggaaggctgt
atgaagacggtgaccgaggaggactgtgagaaccggcccaacctgaggaggaggatgggc
tcctacgtagccaagccagagccacaggctgtgaaagtgttacctgttcaggtgaaacag
gaagccaccgagcatgaggagccaataacaagtgacaaagaaaacatgctgactaagaaa
aacgaccccacagtggaccagtacatgtgtctggtgtgtggcagcgggagcgaagaggac
cgcctgctgctgtgtgacggctgtgacgacagctaccacaccttctgtctgatcccgccc
ctccacgatgtccccaaaggagactggaggtgtcccaagtgccttgctcaggagtgttgc
aaacctcaggtagcctttggtttcgagcaggctggcagggactactctctacgcactttt
ggggacatggcagactccttcaagtcagactatttcaacatgccggttcatatggttcca
acagagctagtggagaaggagttctggcgcttggtcagcacaatcgaagaggacgttact
gtggagtatggggcagacatcgcctccaaggagtttgggagtggcttccccatcagaggc
ggacgattccaagtctcccctgaggatgaggattacctgagcagtggctggaacctgaac
aacatgcccgtgatggactcttcggtgctgactcacattacggccgacatctgtgggatg
aagttaccctggctctacgtgggcatgtgcttctcctccttctgctggcacattgaggac
cactggagctactccatcaactacttgcactggggagagcccaagacgtggtacggggtt
ccgggatacgctgcagagaagctggagtgggtgatgaggaaactggcccccgagctgttt
gagtcccagcctgacctcctgcaccagctggtcaccatcatgaaccccaacacactcatg
aaccacggcgtccccatttatcgcaccaatcagtgctctggcgagtttgtcatcaccttc
cccagagcctaccatagtggatttaaccagggcttcaacttcgctgaggctgtcaacttt
tgcaccatggactggatgcccatgggccgcatgtgtgtggaccactatcggcagctgaat
aggtactgtgtcttctcccacgacgagatggtctgcaagatggcgtccaaggcggacacc
accatggatgtggcccttgcctcggctgtgcagagggacatgaccgtcatgctccaggag
gaagacaagctgagggacaaagtcagcaagatgggcgtgcagcgttcccagcaggcggag
tacgacctgctgccagacgaggagcgccagtgttccaaatgcaggaccacctgctacctg
tctgccctcacctgtccctgcagccccggccagctggtgtgtctgcaccatgcccacgac
ctctgctcctgcacctccagcgaactcacactcaactacaggtttaccatggctgagctc
taccccatgatggaagcagtcactctgcgtgctgagtcctacacatactgggtctcccat
gtcagtgacatcctggaggccaaacaagacaagaaaagtgggttggaagagctgcgctcc
ctggtggtggaggcagaggtgaagcggttccctcagagtgacctcctgcggcagctccgc
acagtcaccctggatgctgagaagtgtgctgtggtggcccagcagctactcattgggaag
agacagaccaggtatcgttcaggtggaaggaagtcccagagccagaacctgctgacagtg
gaggagctcaggtcatttgtcaggcagctgcacaacctgccctgcagcatccgccaggcc
cccttacttaaggacctgctgacccgcgtggatgacttccagcagagcagtgagcagctc
ctctctgacgaggcccccagcccagtggcgctgcagggcctactggacctgagcttgggc
ctggatgtggaacttccccagctggccctgctcagggagagactggagcaggcccgctgg
ctagacggggttaagggggccagtgtccggccacacagcctatgtctggacaccatgcgg
aggctgatagaccagggggtgggcctggccccacacggctcagtggagagggctatggcc
cgcctgcaggagctgcttaccatgtcggagcactgggaggagcgggcgctccgcctcatg
gaggctaggccgcgtcactgtgtggaaactcttgtggaagctctgcaggaggtggctagt
atccctgcctatcttcccaactgtctgctgctgaaggacacggtggaccaggctaaagac
tggcttcaggaggcagagaccctacagctgggaggccgtatccctgtgctggataccctg
actgacctggtgtcccgggccaaggccatcccagtctggctggacccccttgctcgactt
gattccctggtgtttgacgtgcaggcctggaaggagagcgctgccaagacctttctaatg
aagaactctgcttactccctgctggaggtgctgtgcccccggtgtgaggctgggacgggg
cctcagcagtcaaagtataaaagggcaaaggatgcggcccagtgcagcgagagaaacagc
gccaggctggactgcctgagtgatgtggagagggccctctcagagagcaaggactctgcc
tctgctatggccactctggctgaggtacgtcagaaagagatggcgagtctgctggccctt
agggcctcaaacgagtccaagctcctcctggccggtgactgcggggcattgagggtgtgt
gtgtgccacaaggctccgtcaggtgccatgctgcagtgcgagctctgccgtgacgccttc
caccgcagctgcgtcttaggctctaaccaggaccccttgcccaaccaggcctgggtgtgc
ccccagtgccaactctcggagaaaccccctcttgaccgggtgctgcccctgctggcctcc
ctgcagcgcatcagagtgcggctgcctgagggtgacgccctacgcttcctcatcgagagg
acggtccgctggcagcaccgcgtgcagcaggcctccgccgagggggtggttgtgacgacg
tcacatcagcgctgggcctcgtctagtccaacctgggctctgtctccgactcaggaaaca
aacagcatgtcgttctacacagagcaccagtgcattcctctgcagggactgagccctgag
ctggaggagctgatggtagagggcttcctgctgcaggtgactctgcctgagacccagcag
ctgtacagatccctcattaaactggacccccgccatcaccaccacacagacagccccttt
ccacagcacagcgcagaacaggatcaacaccagcagaactctcagggagggagcccccct
cacaaccagaatggagtagcctgtcccaagaaggaggctgtgaatggaaagaggaccaag
cggcacatggaggaggagggctccgagcgcaaggacaaagccaagaagccccgcaagaag
aagcccaagttgaacaaggagaggagccaggaggccaaggggacctcttcactcaccgcc
acccactctgacctctccttgtcggactcggatgaagacttcaccctgtgcgctgcaccg
tggtgccgagagccagaggggaaacaggtgaattgggtccagtgtgacggaagctgccag
cagtggttccatcaggtctgcgtgggagtgtctgcaaagcaggctgaaaaagaggactac
atctgtatcagctgcacacagccagaccatatcagggagtga

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