KEGG   Oncorhynchus nerka (sockeye salmon): 115143078
Entry
115143078         CDS       T07952                                 
Name
(RefSeq) tubulin alpha-1C chain-like
  KO
K07374  tubulin alpha
Organism
one  Oncorhynchus nerka (sockeye salmon)
Pathway
one04145  Phagosome
one04210  Apoptosis
one04530  Tight junction
one04540  Gap junction
one04814  Motor proteins
one05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:one00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    115143078
  09143 Cell growth and death
   04210 Apoptosis
    115143078
  09144 Cellular community - eukaryotes
   04530 Tight junction
    115143078
   04540 Gap junction
    115143078
  09142 Cell motility
   04814 Motor proteins
    115143078
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    115143078
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:one03019]
    115143078
   03036 Chromosome and associated proteins [BR:one03036]
    115143078
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:one04812]
    115143078
   04147 Exosome [BR:one04147]
    115143078
Messenger RNA biogenesis [BR:one03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     115143078
Chromosome and associated proteins [BR:one03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     115143078
Cytoskeleton proteins [BR:one04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    115143078
Exosome [BR:one04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   115143078
  Exosomal proteins of other body fluids (saliva and urine)
   115143078
  Exosomal proteins of colorectal cancer cells
   115143078
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3 DUF7281
Other DBs
NCBI-GeneID: 115143078
NCBI-ProteinID: XP_029538959
LinkDB
Position
LG15:31798524..31801854
AA seq 449 aa
MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGKMPSDKTIGGGDDSFNTFFSETGAGK
HVPRAVFVDLEPTVIDEVRSGIYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD
RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPSYTNLNRLISQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVSEITNACFEPCN
QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAVAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGADSVEGEDEGEEY
NT seq 1350 nt   +upstreamnt  +downstreamnt
atgcgtgagtgtatctcggtccatgtgggccaggctggagtccagatcggcaatgcatgc
tgggagctgtactgtcttgagcatgggatccaaccagatggcaagatgcccagtgacaag
accattggaggaggtgatgactcctttaacaccttcttcagtgagactggagctggcaag
cacgtccccagggctgtgtttgtggatctggagcccactgtcattgatgaggtgcgatct
ggaatttaccgccagctcttccaccctgagcagctgatcactgggaaggaggatgcagcc
aacaactacgcccgtgggcattacaccatcggcaaagagatcatcgacttggttctggac
aggatccgcaaactggctgaccagtgcactggcctccagggcttcctggtcttccacagc
tttggaggtggcaccggttctggtttcacttccctgttgatggaacgcctgtctgttgac
tatggcaagaagtccaagcttgagttctccatctacccagctccccaggtatccacagct
gttgttgagccctacaactcaatcctgaccacccacaccaccctggagcattctgactgt
gctttcatggtagacaatgaggccatctatgacatctgccgtaggaacctcgatatcgag
cgtccttcctacaccaacctgaacaggttgatcagccagattgtgtcctcaatcactgct
tccctccgattcgatggtgccctcaatgttgatctgacagagttccagaccaacttggtg
ccctatccccgtatccacttcccccttgccacctatgccccagtgatctcagcagagaag
gcttaccatgagcagctgactgtttcagagatcacaaatgcctgttttgagccatgtaat
cagatggtgaaatgtgacccacgtcacggcaagtacatggcctgctgtctgctgtaccgt
ggtgacgttgtgcccaaagatgttaacgctgccattgccaccatcaaaacaaaacgctcc
atccagtttgtagactggtgcccaactggtttcaaggttggtatcaactaccagccccca
actgtggtacctggtggagatctggccaaggtccagagggcagtgtgcatgcttagcaac
accactgcagtggctgaggcttgggcccgccttgatcacaagtttgacctgatgtatgcc
aagcgtgcattcgtgcactggtacgtaggtgagggtatggaggagggagagttctctgag
gccagggaagacatggctgctctggagaaagattatgaggaggtgggtgcagatagcgtg
gaaggagaggatgagggagaagagtactaa

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